BAC Information

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BAC

Clone NameB6Ng01-197O12
Chromosome7 (Build37)
Map Location 118,115,730 - 118,288,655
singlet/doubletdoublet
Overlap geneMrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658
Upstream geneTmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1
Downstream geneLOC384658, Galntl4, LOC668399, LOC100042678, Usp47, Dkk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197O12.bB6Ng01-197O12.g
ACCGA019646GA019647
length5661,096
definitionB6Ng01-197O12.b B6Ng01-197O12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,288,084 - 118,288,655)(118,115,730 - 118,116,820)
sequence
aagacacggccaggcaaagccttctgagaagtagtcagagtctcacagac
gaggacagttatatacaactggtcctctgtttagtctgaaagcactaaag
atgttaaccggtgctgggcacctatggatcagaaaaggacactataactt
ttctttcagcctatcataattatctttttcttttaggaatgggttcttac
tttcaatctggaaaataaattattaccttatcaatgataaggttgggcac
tgcagtaaattgataatggtttattaattctgagaccatactaattattc
tactcaaattatcagtgaaagttttggctttggttaggggagcaatgtag
tttctttgaaaaatgctaaaataaattcctttccctatctcaattctgat
gtgatttgaagtgttcaaaaacatacccctgtgcagcattggcctttgga
gaaacagaaaatagcaaatagttctagcagatagcatattattttcattt
cctacatactgcctccctgttgttgttgttttggtttttttgttttttgt
tttttggggggttttt
gaattcaccttgcttttttctttgtttgagacatggtcccttggtgggac
taaccaagtaggcctaggttggctatccaatgagaccaaaggattgacct
gtctccccctgtctcccctcctggtgctggtgttacaggcatataccacc
acatgtagctttgtgtaggttctggaaatccaacttagatcctcatgttc
acaaagcaagcactttactgactgagccatctcctgagaatctatactgg
acttgctaaggtttaagagaaactgtgtgtttcctgggatccagccactc
tcagtgtgtcagaggacagatttatagactgtggccagggcctggtgaag
gttcagagtgtgaagttgtgcatgtgtgtcagccctcagaattctgcagc
tgtccctcaattccaggtgatgctggcactacagtctccagatgtattca
aggtaaccaggtaacatggacagcactaacttctctatcagatacagagg
gaccagggccaagaacccacaaaagtgcttggattccaacatcataagga
aaaaaatagacttttaggtgaaagaatgtttcagtagataagtttatctt
cccaccagcctagaaaataacactttaagtttgggtttattatttagtct
ctttagccgaggatgaccttagcctcctgaaccttttcctcttgagagct
gggcagatgtgggccatcactccctgttttatgggatggaacacagggct
ctgtgcatactaagcaaatattcaaccaactgagccgcattcctagcctg
taaatatttttcctgaaaggaggaagagatccatgaagacaaagttcctg
aggtccacaagatgctaatgaggacctgggggacagagcaggtggcagtg
aacttggttaatgccacctaatcatggctaagaactgaactctagagaat
accctgaaaaagccacacaggtccagggttctatagtcatcgagaaggat
tataggaaagcatcaaagcggtgctggtggggtgagtgttgcctgcaagt
ctctggcttcctgagtcaacagttcttccttcctttggaaactttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_118288084_118288655
seq2: B6Ng01-197O12.b_46_617 (reverse)

seq1  AAAAACCCCCCAAAAAACAAAAAACAAAAAAACCAAAACAACAACAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCCCCAAAAAACAAAAAACAAAAAAACCAAAACAACAACAACAG  50

seq1  GGAGGCAGTATGTAGGAAATGAAAATAATATGCTATCTGCTAGAACTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGTATGTAGGAAATGAAAATAATATGCTATCTGCTAGAACTATT  100

seq1  TGCTATTTTCTGTTTCTCCAAAGGCCAATGCTGCACAGGGGTATGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTTTCTGTTTCTCCAAAGGCCAATGCTGCACAGGGGTATGTTTTT  150

seq1  GAACACTTCAAATCACATCAGAATTGAGATAGGGAAAGGAATTTATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTCAAATCACATCAGAATTGAGATAGGGAAAGGAATTTATTTTA  200

seq1  GCATTTTTCAAAGAAACTACATTGCTCCCCTAACCAAAGCCAAAACTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTCAAAGAAACTACATTGCTCCCCTAACCAAAGCCAAAACTTTC  250

seq1  ACTGATAATTTGAGTAGAATAATTAGTATGGTCTCAGAATTAATAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAATTTGAGTAGAATAATTAGTATGGTCTCAGAATTAATAAACCA  300

seq1  TTATCAATTTACTGCAGTGCCCAACCTTATCATTGATAAGGTAATAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAATTTACTGCAGTGCCCAACCTTATCATTGATAAGGTAATAATTT  350

seq1  ATTTTCCAGATTGAAAGTAAGAACCCATTCCTAAAAGAAAAAGATAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAGATTGAAAGTAAGAACCCATTCCTAAAAGAAAAAGATAATTA  400

seq1  TGATAGGCTGAAAGAAAAGTTATAGTGTCCTTTTCTGATCCATAGGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGCTGAAAGAAAAGTTATAGTGTCCTTTTCTGATCCATAGGTGCC  450

seq1  CAGCACCGGTTAACATCTTTAGTGCTTTCAGACTAAACAGAGGACCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCGGTTAACATCTTTAGTGCTTTCAGACTAAACAGAGGACCAGTT  500

seq1  GTATATAACTGTCCTCGTCTGTGAGACTCTGACTACTTCTCAGAAGGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAACTGTCCTCGTCTGTGAGACTCTGACTACTTCTCAGAAGGCTT  550

seq1  TGCCTGGCCGTGTCTTGAATTC  572
      ||||||||||||||||||||||
seq2  TGCCTGGCCGTGTCTTGAATTC  572

seq1: chr7_118115730_118116820
seq2: B6Ng01-197O12.g_64_1159

seq1  GAATTCACCTTGCTTTTTTCTTTGTTTGAGACATGGTCCCTTGGTGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTGCTTTTTTCTTTGTTTGAGACATGGTCCCTTGGTGGGAC  50

seq1  TAACCAAGTAGGCCTAGGTTGGCTATCCAATGAGACCAAAGGATTGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGTAGGCCTAGGTTGGCTATCCAATGAGACCAAAGGATTGACCT  100

seq1  GTCTCCCCCTGTCTCCCCTCCTGGTGCTGGTGTTACAGGCATATACCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCCCTGTCTCCCCTCCTGGTGCTGGTGTTACAGGCATATACCACC  150

seq1  ACATGTAGCTTTGTGTAGGTTCTGGAAATCCAACTTAGATCCTCATGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAGCTTTGTGTAGGTTCTGGAAATCCAACTTAGATCCTCATGTTC  200

seq1  ACAAAGCAAGCACTTTACTGACTGAGCCATCTCCTGAGAATCTATACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCAAGCACTTTACTGACTGAGCCATCTCCTGAGAATCTATACTGG  250

seq1  ACTTGCTAAGGTTTAAGAGAAACTGTGTGTTTCCTGGGATCCAGCCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTAAGGTTTAAGAGAAACTGTGTGTTTCCTGGGATCCAGCCACTC  300

seq1  TCAGTGTGTCAGAGGACAGATTTATAGACTGTGGCCAGGGCCTGGTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGTCAGAGGACAGATTTATAGACTGTGGCCAGGGCCTGGTGAAG  350

seq1  GTTCAGAGTGTGAAGTTGTGCATGTGTGTCAGCCCTCAGAATTCTGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGAGTGTGAAGTTGTGCATGTGTGTCAGCCCTCAGAATTCTGCAGC  400

seq1  TGTCCCTCAATTCCAGGTGATGCTGGCACTACAGTCTCCAGATGTATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTCAATTCCAGGTGATGCTGGCACTACAGTCTCCAGATGTATTCA  450

seq1  AGGTAACCAGGTAACATGGACAGCACTAACTTCTCTATCAGATACAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACCAGGTAACATGGACAGCACTAACTTCTCTATCAGATACAGAGG  500

seq1  GACCAGGGCCAAGAACCCACAAAAGTGCTTGGATTCCAACATCATAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGGCCAAGAACCCACAAAAGTGCTTGGATTCCAACATCATAAGGA  550

seq1  AAAAAATAGACTTTTAGGTGAAAGAATGTTTCAGTAGATAAGTTTATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGACTTTTAGGTGAAAGAATGTTTCAGTAGATAAGTTTATCTT  600

seq1  CCCACCAGCCTAGAAAATAACACTTTAAGTTTGGGTTTATTATTTAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAGCCTAGAAAATAACACTTTAAGTTTGGGTTTATTATTTAGTCT  650

seq1  CTTTAGCCGAGGATGACCTTAGCCTCCTGAACCTTTTCCTCTTGAGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCCGAGGATGACCTTAGCCTCCTGAACCTTTTCCTCTTGAGAGCT  700

seq1  GGGCAGATGTGGGCCATCACTCCCTGTTTTATGGGATGGAACACAGGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGATGTGGGCCATCACTCCCTGTTTTATGGGATGGAACACAGGGCT  750

seq1  CTGTGCATACTAAGCAAATATTCAACCAACTGAGCCGCATTCCTAGCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATACTAAGCAAATATTCAACCAACTGAGCCGCATTCCTAGCCTG  800

seq1  TAAATA-TTTTCCTG-AAGGAGGAAGAGATCCATGAAGACAAAGTTCCTG  848
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTTCCTGAAAGGAGGAAGAGATCCATGAAGACAAAGTTCCTG  850

seq1  AGGTCCACAAGATGCTAATGAGGACCT-GGGGACAGAGCAGGTGGCAGTG  897
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGGTCCACAAGATGCTAATGAGGACCTGGGGGACAGAGCAGGTGGCAGTG  900

seq1  AACTTGG-TAATGCCACCTAATCATGGCT-AGAACTGAACTCTAGAGAAT  945
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  AACTTGGTTAATGCCACCTAATCATGGCTAAGAACTGAACTCTAGAGAAT  950

seq1  A-CCTG-AAAAGCCACACAGGTCCAGGG-TCTATAGTCATCGAG-AGGA-  990
      | |||| ||||||||||||||||||||| ||||||||||||||| |||| 
seq2  ACCCTGAAAAAGCCACACAGGTCCAGGGTTCTATAGTCATCGAGAAGGAT  1000

seq1  TATAGGAAAGCATCAAAGCCGGTGCTGGGTGGGTGAGTGTTGGCTGCAAG  1040
      |||||||||||||||||| |||||||||  |||||||||||| |||||||
seq2  TATAGGAAAGCATCAAAG-CGGTGCTGGTGGGGTGAGTGTTGCCTGCAAG  1049

seq1  TCTCCTGGGCCTTCCTGAGTTCAACAGTTCTCCTCCCCTTTGGGAACTTT  1090
      ||| ||||  ||||||||| ||||||||||| |   ||||||| ||||||
seq2  TCT-CTGG--CTTCCTGAG-TCAACAGTTCTTCCTTCCTTTGGAAACTTT  1095

seq1  G  1091
      |
seq2  G  1096