BAC Information

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BAC

Clone NameB6Ng01-198B04
Chromosome7 (Build37)
Map Location 149,193,852 - 149,335,019
singlet/doubletdoublet
Overlap gene2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616
Upstream geneIfitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2
Downstream geneEG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198B04.bB6Ng01-198B04.g
ACCGA019764GA019765
length1,1611,118
definitionB6Ng01-198B04.b B6Ng01-198B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,333,865 - 149,335,019)(149,193,852 - 149,194,989)
sequence
gaattcagcagagagaagttcgaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
gaggagaagaagatgaagaagaaaacagaaagattagaaatgaaagatga
ataaaccagaagaaatgtcagctgaaatctcaattagtagacaacatgaa
gaagactatagagactcaaagattaggtcaatggttattaaaagcataga
gcaagaaagaaaaatgcaaggtcagcaagaaggctcagtaggtataggtg
attgccacaaaacctaaagatctgaatttgactcccacaacttgtcctct
tatctccatgtaaattccatagcacccatgtgcacaagcatgcatgtgtg
tgtacacacatagtcacaaataaataaaagtaaaataaaatttaataaaa
ataaatgagaagttgtaataaagacttgcaggacctatgagatatggatc
aaaaagccaaacttaagactagtgggtctagacaaaggcctgcaggaatg
agatgaaggcaaatcagtcatttgacagtgtgaaatgttccaagacctgg
gcagtatatgaatagaccagtattgaaagcatttagaatctcaatagaca
tggccaaaaaagggatttctttcctatgatagagttaagctgtcaagtgc
acagaacaaaagaaagtattgaaaagtattgaaagtattgtgcttacaaa
ggcaaacccctgagtaataacagatttattggcagaaactctaatagcca
ttctggcatgaaataatgtatttcaaactcagaaagataataactgccaa
taaggactactatacccagcaaagctattctgcagaacttacagagaaat
agcgatcttctaagatatgcataaactttaaaaaaaaagtatgcccatag
ccagctttctaggagagacataagggaatcccacacatagggaagagaga
aacacagtcctgagaagctcagggaagactagatcatacttagatcatac
tagaaggaaccacagagatgaattggggattaaaggcagagatgacatca
ttgtcaaagccatgtactgctctgcagaagcaccagaagtctgcttccca
gcaccccacat
gaattctctggtaaagtagacagggacagatggctacggaaaatgtcaga
aggcaagtgggtttagtccaggtgttaacagaaaagcctcaaggcccaag
tacagtaagtttttgttgttgttttgttttaaggcccagtagccacaaat
gcattgcataagctaagccagaaggccagacaaacaccaaactctaggag
ggtccgtcccacaatttaaatggaacctgtcagggggtgctgagcatccc
aagaatcaaccagcagagccgctggtgccagttggtaggcatggcaagca
ggttgccaggatccaaagatctgtgaagaccaagccataaccatgcctgg
ctccattctttccctacttgggcaccaggcaagctccagtcatgggctta
ggtcccataacccacctaggcagcaggttgcctgctcctaggctcccaat
gttgagccaattctacaggtctgaagacctccatctccactcaaggaggt
agagccagtgaggatcagggtatggcgcttgtacccgtccctacccagga
accacaaggaagactcagaataatatgaaatggcaggctgagaggacaca
ggctctgacctgagagaatgtttattatgtctgaacagatgaactaaagc
agattctgcctttcgctgatagccctgtctccacacagggcctcagccag
tcctgggctgccctggcccctacgcacaattggggcctccttgggcactg
aggaggcagcaagaaggggtaataggagcaagcagcagtgtgggccctcc
tgggtcaccccaggcagacttctctaccccagggactctgagccaagatc
caggcaagagctagggaggaaagctgcaggcaggcctctgtaagagcctc
atccccaaagcacagcagaactccagatctgcagggcaagccccataagg
gggagacactctcacatgtgctctttcaagcgcagagctcccccccaccc
gggagtgggggaaggccatgagccactgcagacccatgatagaactccac
taaagaaatgtcaacgtccggtcatatgttgtgaatgaatggaatgactc
aatgcttcactactaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149333865_149335019
seq2: B6Ng01-198B04.b_48_1208 (reverse)

seq1  ATGT-GGGTGCTGGGAACCAGGC-TCTGGTGC-TCTGCAGAGCAGTACAT  47
      |||| |||||||||||| ||| | |||||||| |||||||||||||||||
seq2  ATGTGGGGTGCTGGGAAGCAGACTTCTGGTGCTTCTGCAGAGCAGTACAT  50

seq1  GCTTTTGACCATGATGTCATCTCTGCC-TTAATCCCCATTTCATCTCTGT  96
      |  |||||| ||||||||||||||||| |||||||||| |||||||||||
seq2  GGCTTTGACAATGATGTCATCTCTGCCTTTAATCCCCAATTCATCTCTGT  100

seq1  -GTTC--TCTAGTATGATCT-AGTATGATCTAGTCTTCCCTGAGC-TCTC  141
       ||||  ||||||||||||| |||||||||||||||||||||||| ||||
seq2  GGTTCCTTCTAGTATGATCTAAGTATGATCTAGTCTTCCCTGAGCTTCTC  150

seq1  AGGACTGTGTTTCTCTCTTCCCTATGTGTGGGATTCCTTTATGTCTCTCC  191
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGACTGTGTTTCTCTCTTCCCTATGTGTGGGATTCCCTTATGTCTCTCC  200

seq1  TAGAAAGCTGGCTATGGGCATACTTTTTTTTTAAAGTTTATGCATATCTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCTGGCTATGGGCATACTTTTTTTTTAAAGTTTATGCATATCTT  250

seq1  AGAAGATCGCTATTTCTCTGTAAGTTCTGCAGAATAGCTTTGCTGGGTAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATCGCTATTTCTCTGTAAGTTCTGCAGAATAGCTTTGCTGGGTAT  300

seq1  AGTAGTCCTTATTGGCAGTTATTATCTTTCTGAGTTTGAAATACATTATT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCCTTATTGGCAGTTATTATCTTTCTGAGTTTGAAATACATTATT  350

seq1  TCATGCCAGAATGGCTATTAGAGTTTCTGCCAATAAATCTGTTATTACTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCAGAATGGCTATTAGAGTTTCTGCCAATAAATCTGTTATTACTC  400

seq1  AGGGGTTTGCCTTTGTAAGCACAATACTTTCAATACTTTTCAATACTTTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTGCCTTTGTAAGCACAATACTTTCAATACTTTTCAATACTTTC  450

seq1  TTTTGTTCTGTGCACTTGACAGCTTAACTCTATCATAGGAAAGAAATCCC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCTGTGCACTTGACAGCTTAACTCTATCATAGGAAAGAAATCCC  500

seq1  TTTTTTGGCCATGTCTATTGAGATTCTAAATGCTTTCAATACTGGTCTAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGCCATGTCTATTGAGATTCTAAATGCTTTCAATACTGGTCTAT  550

seq1  TCATATACTGCCCAGGTCTTGGAACATTTCACACTGTCAAATGACTGATT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATACTGCCCAGGTCTTGGAACATTTCACACTGTCAAATGACTGATT  600

seq1  TGCCTTCATCTCATTCCTGCAGGCCTTTGTCTAGACCCACTAGTCTTAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCATCTCATTCCTGCAGGCCTTTGTCTAGACCCACTAGTCTTAAG  650

seq1  TTTGGCTTTTTGATCCATATCTCATAGGTCCTGCAAGTCTTTATTACAAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTTGATCCATATCTCATAGGTCCTGCAAGTCTTTATTACAAC  700

seq1  TTCTCATTTATTTTTATTAAATTTTATTTTACTTTTATTTATTTGTGACT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTTATTTTTATTAAATTTTATTTTACTTTTATTTATTTGTGACT  750

seq1  ATGTGTGTACACACACATGCATGCTTGTGCACATGGGTGCTATGGAATTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTACACACACATGCATGCTTGTGCACATGGGTGCTATGGAATTT  800

seq1  ACATGGAGATAAGAGGACAAGTTGTGGGAGTCAAATTCAGATCTTTAGGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGATAAGAGGACAAGTTGTGGGAGTCAAATTCAGATCTTTAGGT  850

seq1  TTTGTGGCAATCACCTATACCTACTGAGCCTTCTTGCTGACCTTGCATTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGCAATCACCTATACCTACTGAGCCTTCTTGCTGACCTTGCATTT  900

seq1  TTCTTTCTTGCTCTATGCTTTTAATAACCATTGACCTAATCTTTGAGTCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTGCTCTATGCTTTTAATAACCATTGACCTAATCTTTGAGTCT  950

seq1  CTATAGTCTTCTTCATGTTGTCTACTAATTGAGATTTCAGCTGACATTTC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTCTTCTTCATGTTGTCTACTAATTGAGATTTCAGCTGACATTTC  1000

seq1  TTCTGGTTTATTCATCTTTCATTTCTAATCTTTCTGTTTTCTTCTTCATC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTTATTCATCTTTCATTTCTAATCTTTCTGTTTTCTTCTTCATC  1050

seq1  TTCTTCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  1091
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCCTC---CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  1097

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAACTTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAACTTC  1147

seq1  TCTCTGCTGAATTC  1155
      ||||||||||||||
seq2  TCTCTGCTGAATTC  1161

seq1: chr7_149193852_149194989
seq2: B6Ng01-198B04.g_63_1180

seq1  GAATTCTCTGGTAAAGTAGACAGGGACAGATGGCTACGGAAAATGTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGTAAAGTAGACAGGGACAGATGGCTACGGAAAATGTCAGA  50

seq1  AGGCAAGTGGGTTTAGTCCAGGTGTTAACAGAAAAGCCTCAAGGCCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGTGGGTTTAGTCCAGGTGTTAACAGAAAAGCCTCAAGGCCCAAG  100

seq1  TACAGTAAGTTTTTGTTGTTGTTTTGTTTTAAGGCCCAGTAGCCACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAGTTTTTGTTGTTGTTTTGTTTTAAGGCCCAGTAGCCACAAAT  150

seq1  GCATTGCATAAGCTAAGCCAGAAGGCCAGACAAACACCAAACTCTAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCATAAGCTAAGCCAGAAGGCCAGACAAACACCAAACTCTAGGAG  200

seq1  GGTCCGTCCCACAATTTAAATGGAACCTGTCAGGGGGTGCTGAGCATCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCGTCCCACAATTTAAATGGAACCTGTCAGGGGGTGCTGAGCATCCC  250

seq1  AAGAATCAACCAGCAGAGCCGCTGGTGCCAGTTGGTAGGCATGGCAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCAACCAGCAGAGCCGCTGGTGCCAGTTGGTAGGCATGGCAAGCA  300

seq1  GGTTGCCAGGATCCAAAGATCTGTGAAGACCAAGCCATAACCATGCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCAGGATCCAAAGATCTGTGAAGACCAAGCCATAACCATGCCTGG  350

seq1  CTCCATTCTTTCCCTACTTGGGCACCAGGCAAGCTCCAGTCATGGGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCTTTCCCTACTTGGGCACCAGGCAAGCTCCAGTCATGGGCTTA  400

seq1  GGTCCCATAACCCACCTAGGCAGCAGGTTGCCTGCTCCTAGGCTCCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCATAACCCACCTAGGCAGCAGGTTGCCTGCTCCTAGGCTCCCAAT  450

seq1  GTTGAGCCAATTCTACAGGTCTGAAGACCTCCATCTCCACTCAAGGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCCAATTCTACAGGTCTGAAGACCTCCATCTCCACTCAAGGAGGT  500

seq1  AGAGCCAGTGAGGATCAGGGTATGGCGCTTGTACCCGTCCCTACCCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGTGAGGATCAGGGTATGGCGCTTGTACCCGTCCCTACCCAGGA  550

seq1  ACCACAAGGAAGACTCAGAATAATATGAAATGGCAGGCTGAGAGGACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAGGAAGACTCAGAATAATATGAAATGGCAGGCTGAGAGGACACA  600

seq1  GGCTCTGACCTGAGAGAATGTTTATTATGTCTGAACAGATGAACTAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGACCTGAGAGAATGTTTATTATGTCTGAACAGATGAACTAAAGC  650

seq1  AGATTCTGCCTTTCGCTGATAGCCCTGTCTCCACACAGGGCCTCAGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGCCTTTCGCTGATAGCCCTGTCTCCACACAGGGCCTCAGCCAG  700

seq1  TCCTGGGCTGCCCTGGCCCCTACGCACAATTGGGGCCTCCTTGGGCACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGCTGCCCTGGCCCCTACGCACAATTGGGGCCTCCTTGGGCACTG  750

seq1  AGGAGGCAGCAAGAAGGGGTAATAGGAGCAAGCAGCAGGTGTGGGCCCTC  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGAGGCAGCAAGAAGGGGTAATAGGAGCAAGCAGCA-GTGTGGGCCCTC  799

seq1  CTGGGTCACCCCAGGCAGACTTCTCTACCCCAGGGACTCTGAGCCAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCACCCCAGGCAGACTTCTCTACCCCAGGGACTCTGAGCCAAGAT  849

seq1  CCAGGCAAGAGCTAGGGAGGAAAGCTGCAGGGCAGGCCTCTGTAAGAGCC  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCAGGCAAGAGCTAGGGAGGAAAGCTGCA-GGCAGGCCTCTGTAAGAGCC  898

seq1  -CATCCCCAAAGCACAGCAGAACTCCAGATCTGCAGGGCAAGCCCCATAA  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCCAAAGCACAGCAGAACTCCAGATCTGCAGGGCAAGCCCCATAA  948

seq1  GGGGGAGACACCTCTCACAAGGTGCTCCTTTCAAAGCCGCAGAGCTCCCC  999
      |||||||||| ||||||| | ||||| |||||||   |||||||||||||
seq2  GGGGGAGACA-CTCTCAC-ATGTGCT-CTTTCAA--GCGCAGAGCTCCCC  993

seq1  CCACCCCGGGAGTGGGGGGAAGGCAAGAGCCACATGGAAGACCCAAGAAA  1049
      ||  |||||||||||||| | | || |||||||   | ||||||| || |
seq2  CCCACCCGGGAGTGGGGGAAGGCCATGAGCCAC--TGCAGACCCATGATA  1041

seq1  GGAAAACCCCACAGAAGAAAAATCAAAACATCAGTCCAAT-AAATGTTTG  1098
      |   ||| ||||  ||||||  ||||       ||||  | | |||||  
seq2  G---AACTCCACTAAAGAAATGTCAA------CGTCCGGTCATATGTT--  1080

seq1  TTGAATGAAT-GAATGACTCCAAAGGCTCTTCACTAC-AAAC  1138
       ||||||||| |||||||||  || |  ||||||||| ||||
seq2  GTGAATGAATGGAATGACTC--AATG--CTTCACTACTAAAC  1118