BAC Information

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BAC

Clone NameB6Ng01-198B08
Chromosome7 (Build37)
Map Location 107,955,741 - 108,136,887
singlet/doubletdoublet
Overlap geneB930006L02Rik, Tnfrsf19l, Arhgef17, P2ry6
Upstream geneNeu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, LOC100041204
Downstream geneP2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198B08.bB6Ng01-198B08.g
ACCGA019772GA019773
length213988
definitionB6Ng01-198B08.b B6Ng01-198B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,955,741 - 107,955,953)(108,135,902 - 108,136,887)
sequence
gaattccagcctgtacaactctccaacaggactggctgctggagaggttc
ttagcatcccgtttggaaaggtcccagttttacttgggaggcagacagag
gcaggtggatttctgttagtttgaggttagcctggtctacagatcgagtt
ccaggatggtcaaggctagagagaaactgtctctccataaaaagaaaatg
aaaggcaggggga
gaattcctggcagcaaagggatgcgggtggaggcagtccacagcttaact
tctaggttgtcagttcctggagctgtctctgtgctgtttcacggctgtgc
tttgaccatggtaggatccgggtttttgatgctgcactgctgccccttgg
tggtcaaatcctgatgaggactcagggaatggagaagagtcgtctattgc
gatctatctggatgaattcgtgagctgtttggtagtcaggctgttgctgg
atcagggtaatggtgggataggaacaatggattgacagaggatctagcat
gtttattgtcacttaccaactaagtgacagtggctgattctgcctctgcc
atagtgtcagcttcctccctccccagccagggctggagatcattctgttc
tgggcactcatttgcctgtgggaaagccctattcagtgctcagtcacagc
caaagaagggtgcagcccagaccaatatccaggtggaacactttttcctt
gtctcattttagcaaagcaccagagacccctgccctgctgtcttgtcttc
tcagggtggctcccaaagctgtactctgttccctgggaagtgtggcaata
gagttgtcttagcagccagtggtgttgacctttaaaggacggaagctagt
cctatcgtttggatgcccaagcacagaagtagggaaagtgcatctaactg
atgcagaagtggagctgaagcgctggtccgtgggatggaacaaaatgcac
aaaggtgatggatgggcaggcctaggctagatttccaggccctcctgctc
tctgccgccccaggcctgctcattgctcatccccaggccctctgctgacc
cacagacagacagatggaaacctcttgttgacccacagacagatggaaac
tccttgctgacccacagaacagatggaacctcctgctgacccacagacag
aatggaaactccttgctgaccacagacagaatggaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107955741_107955953
seq2: B6Ng01-198B08.b_42_254

seq1  GAATTCCAGCCTGTACAACTCTCCAACAGGACTGGCTGCTGGAGAGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCTGTACAACTCTCCAACAGGACTGGCTGCTGGAGAGGTTC  50

seq1  TTAGCATCCCGTTTGGAAAGGTCCCAGTTTTACTTGGGAGGCAGACAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATCCCGTTTGGAAAGGTCCCAGTTTTACTTGGGAGGCAGACAGAG  100

seq1  GCAGGTGGATTTCTGTTAGTTTGAGGTTAGCCTGGTCTACAGATCGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGATTTCTGTTAGTTTGAGGTTAGCCTGGTCTACAGATCGAGTT  150

seq1  CCAGGATGGTCAAGGCTAGAGAGAAACTGTCTCTCCATAAAAAGAAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATGGTCAAGGCTAGAGAGAAACTGTCTCTCCATAAAAAGAAAATG  200

seq1  AAAGGCAGGGGGA  213
      |||||||||||||
seq2  AAAGGCAGGGGGA  213

seq1: chr7_108135902_108136887
seq2: B6Ng01-198B08.g_64_1051 (reverse)

seq1  GTTTCCA-TCTGTCTGTGGGTCAGCAAGGAGTTTCCA-TCTGTCTGTGGG  48
      ||||||| ||||||||| ||||||||||||||||||| ||||||||||||
seq2  GTTTCCATTCTGTCTGT-GGTCAGCAAGGAGTTTCCATTCTGTCTGTGGG  49

seq1  TCAGCAAGGAGTTTCCATCTG-TCTGTGGGTCAGCAAGGAGTTTCCATCT  97
      ||||| ||||| ||||||||| ||||||||||||||||||||||||||||
seq2  TCAGC-AGGAGGTTCCATCTGTTCTGTGGGTCAGCAAGGAGTTTCCATCT  98

seq1  GTCTGTGGGTCAACAAGGGGTTTCCATCTGTCTGTCTGTGGGTCAGCAGA  147
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTCTGTGGGTCAACAAGAGGTTTCCATCTGTCTGTCTGTGGGTCAGCAGA  148

seq1  -GGCCTGGGGATGAGCAATGAGCAGGCCTGGGGCGGCAGAGAGCAGGAGG  196
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGGGATGAGCAATGAGCAGGCCTGGGGCGGCAGAGAGCAGGAGG  198

seq1  GCCTGGAAATCTAGCCTAGGCCTGCCCATCCATCACCTTTGTGCATTTTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGAAATCTAGCCTAGGCCTGCCCATCCATCACCTTTGTGCATTTTG  248

seq1  TTCCATCCCACGGACCAGCGCTTCAGCTCCACTTCTGCATCAGTTAGATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCCCACGGACCAGCGCTTCAGCTCCACTTCTGCATCAGTTAGATG  298

seq1  CACTTTCCCTACTTCTGTGCTTGGGCATCCAAACGATAGGACTAGCTTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCCCTACTTCTGTGCTTGGGCATCCAAACGATAGGACTAGCTTCC  348

seq1  GTCCTTTAAAGGTCAACACCACTGGCTGCTAAGACAACTCTATTGCCACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTAAAGGTCAACACCACTGGCTGCTAAGACAACTCTATTGCCACA  398

seq1  CTTCCCAGGGAACAGAGTACAGCTTTGGGAGCCACCCTGAGAAGACAAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGGGAACAGAGTACAGCTTTGGGAGCCACCCTGAGAAGACAAGA  448

seq1  CAGCAGGGCAGGGGTCTCTGGTGCTTTGCTAAAATGAGACAAGGAAAAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGCAGGGGTCTCTGGTGCTTTGCTAAAATGAGACAAGGAAAAAG  498

seq1  TGTTCCACCTGGATATTGGTCTGGGCTGCACCCTTCTTTGGCTGTGACTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCACCTGGATATTGGTCTGGGCTGCACCCTTCTTTGGCTGTGACTG  548

seq1  AGCACTGAATAGGGCTTTCCCACAGGCAAATGAGTGCCCAGAACAGAATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAATAGGGCTTTCCCACAGGCAAATGAGTGCCCAGAACAGAATG  598

seq1  ATCTCCAGCCCTGGCTGGGGAGGGAGGAAGCTGACACTATGGCAGAGGCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAGCCCTGGCTGGGGAGGGAGGAAGCTGACACTATGGCAGAGGCA  648

seq1  GAATCAGCCACTGTCACTTAGTTGGTAAGTGACAATAAACATGCTAGATC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGCCACTGTCACTTAGTTGGTAAGTGACAATAAACATGCTAGATC  698

seq1  CTCTGTCAATCCATTGTTCCTATCCCACCATTACCCTGATCCAGCAACAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAATCCATTGTTCCTATCCCACCATTACCCTGATCCAGCAACAG  748

seq1  CCTGACTACCAAACAGCTCACGAATTCATCCAGATAGATCGCAATAGACG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTACCAAACAGCTCACGAATTCATCCAGATAGATCGCAATAGACG  798

seq1  ACTCTTCTCCATTCCCTGAGTCCTCATCAGGATTTGACCACCAAGGGGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTCCATTCCCTGAGTCCTCATCAGGATTTGACCACCAAGGGGCA  848

seq1  GCAGTGCAGCATCAAAAACCCGGATCCTACCATGGTCAAAGCACAGCCGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCAGCATCAAAAACCCGGATCCTACCATGGTCAAAGCACAGCCGT  898

seq1  GAAACAGCACAGAGACAGCTCCAGGAACTGACAACCTAGAAGTTAAGCTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGCACAGAGACAGCTCCAGGAACTGACAACCTAGAAGTTAAGCTG  948

seq1  TGGACTGCCTCCACCCGCATCCCTTTGCTGCCAGGAATTC  986
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGCCTCCACCCGCATCCCTTTGCTGCCAGGAATTC  988