BAC Information

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BAC

Clone NameB6Ng01-198D08
Chromosome7 (Build37)
Map Location 112,002,826 - 112,003,614
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a
Downstream geneDub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198D08.bB6Ng01-198D08.g
ACCGA019864GA019865
length1,170968
definitionB6Ng01-198D08.b B6Ng01-198D08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaaattatatcactatttattaagctctttataatggaactg
ctattagatctttttctgatagtcaaaactttaatgagaactctgtcatt
ctcccatgtgtcaccagttaattgcttctagaaggttaccagactttcta
ctactcagaacacattcaaaatgacaataaaaccattaaacaaaggtcat
taaaagggaactaaggatttaatataggtggtaggacagaagataaaata
ttgactggttttatctatacaaaacttcagtaataattatgttgcttttt
tttttcggtttttcgagacagggtttctctgtgtagccccagctgtcctg
gaactcactttgtagaccaggttggcctcgaactcagaaatctacctgcc
tctgcctcccaagtgcttggattaaaggcgtgtgccaccagacccggctt
ttaaatatggtttttaattctcagtgaagattctgggctaaccctcaaca
agaccaggggcctaggttattcccccaacaaacttacaccctcaggttac
aagaccacccccttattaaggaccaccaatgaagagggaagcagaaatta
agtttatgatatgactcccagcaccagccaattatgttaaaggtcacagt
agctttccaattagaagcatgcatactcacactccacttgctgcttacta
taaataaggccttgcctggacagatatttggagctctctcaccatcaaaa
cccaccttgtatgacatggtgcattggaggggcctgagctagcttgaata
aaagaccctgctgagagttgcatctgatctgctcctgtctgattctttga
gggatcactaacacttctctggcactttacgacctcatgtcacaacaatt
ataatttgattggtgtcacccctctgccctaaaatgggtcagaatatcct
ggaaacaacacaagtacatctgttatggtgtgtaggacaattcataattt
cgctatcaatatgggagattttacatttcccagatcagtgctttcaggtc
acctccagactgaagaacttctttcagggagatggctcactatgaatcag
ttccattaataatttgtaaacacactttttttattggagtttcttatatt
tagcattattttagaattca
gaattccttttctggtccactctatttggagttctgtaggcttcttgtat
gttcatggacatctctttctttagttttgggacgttttcttctataattt
tgaagatatttgctggtccttaagttgaaaatcttcattctcatctactc
ctactgtcagtaggtttggtctcttattgtgtcctggatttcctggatgt
cttgagttaggatctttttgcattttgcatttttttgattgttgtgcaga
tgttctctatggaatcttctgcacctgagattctctctttcatctcttgt
attctgttcctgatgctctcatctatggttccagatttctttcctagggt
ttctatctccagaattttctcactttgagttttctttattatgtctactt
ccctttttaggtatagtatgcttttgctcatttccatcacctgtttggat
gtgttttcctgtttttctttaaggacttgtaactctttagcagtgttctc
ctgtatttatttaagtgagttttcaaatccttcttgatgtcctctaccat
catcatggatattcctttaaaactgggtctagcttttcaggtgtgttggg
gtgtccaggagtagctttggtgggggtgctgggttctgatggtggtgagt
ggtcttggtgtctgttattaagattcttacatttgtcttccaccctctgg
taatcttctggagttagtttgttatatttgtctctggttagagcttgttt
cctttcatgattctgttaacctctaccagcagacctgggagactagttct
ctcctgagtttcagtggtttagatcactctctggaggcaagcttttcctc
ttgcaggaaggcttcacatatatcttggtgttcggacttgcctcctgtca
gaagaataattgccagaaaacggggcctgtcccagatagctggtaacttt
cttgtagtccacatatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112002826_112003614
seq2: B6Ng01-198D08.b_426_1217

seq1  CGAACTCAGAAATCTACCTGCCTCTGCCTCCCAAGTGCTTGGATTAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTCAGAAATCTACCTGCCTCTGCCTCCCAAGTGCTTGGATTAAAGG  50

seq1  CGTGTGCCACCAGACCCGGCTTTTAAATATGGTTTTTAATTCTCAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCCACCAGACCCGGCTTTTAAATATGGTTTTTAATTCTCAGTGAA  100

seq1  GATTCTGGGCTAACCCTCAACAAGACCAGGGGCCTAGGTTATTCCCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGGCTAACCCTCAACAAGACCAGGGGCCTAGGTTATTCCCCCAA  150

seq1  CAAACTTACACCCTCAGGTTACAAGACCACCCCCTTATTAAGGACCACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTACACCCTCAGGTTACAAGACCACCCCCTTATTAAGGACCACCA  200

seq1  ATGAAGAGGGAAGCAGAAATTAAGTTTATGATATGACTCCCAGCACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGGGAAGCAGAAATTAAGTTTATGATATGACTCCCAGCACCAGC  250

seq1  CAATTATGTTAAAGGTCACAGTAGCTTTCCAATTAGAAGCATGCATACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATGTTAAAGGTCACAGTAGCTTTCCAATTAGAAGCATGCATACTC  300

seq1  ACACTCCACTTGCTGCTTACTATAAATAAGGCCTTGCCTGGACAGATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCACTTGCTGCTTACTATAAATAAGGCCTTGCCTGGACAGATATT  350

seq1  TGGAGCTCTCTCACCATCAAAACCCACCTTGTATGACATGGTGCATTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTCTCTCACCATCAAAACCCACCTTGTATGACATGGTGCATTGGA  400

seq1  GGGGCCTGAGCTAGCTTGAATAAAAGACCCTGCTGAGAGTTGCATCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTGAGCTAGCTTGAATAAAAGACCCTGCTGAGAGTTGCATCTGAT  450

seq1  CTGCTCCTGTCTGATTCTTTGAGGGATCACTAACACTTCTCTGGCACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTGTCTGATTCTTTGAGGGATCACTAACACTTCTCTGGCACTTT  500

seq1  ACGACCTCATGTCACAACAATTATAATTTGATTGGTGTCACCCCTCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCTCATGTCACAACAATTATAATTTGATTGGTGTCACCCCTCTGCC  550

seq1  CTAAAATGGGTCAGAAATATCCTGGAAACAACACAAGTACATCTG-TATG  599
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  CTAAAATGGGTCAG-AATATCCTGGAAACAACACAAGTACATCTGTTATG  599

seq1  GTGTGTAGGACAATTCATAA-TTCGCTATCAATAT-GGAGATTTTACA-T  646
      |||||||||||||||||||| |||||||||||||| |||||||||||| |
seq2  GTGTGTAGGACAATTCATAATTTCGCTATCAATATGGGAGATTTTACATT  649

seq1  TCCCAGATCAGTGC-TTCA-GTCA-CTCCAGACTGAAG-ACTTC-TTCAG  691
      |||||||||||||| |||| |||| ||||||||||||| ||||| |||||
seq2  TCCCAGATCAGTGCTTTCAGGTCACCTCCAGACTGAAGAACTTCTTTCAG  699

seq1  GAGAATTGGCTCACTATGATTCAAGTTCAATAATAAATTTTGTTAAACAC  741
      | ||  ||||||||||||| |||  | || ||||||  |||| |||||||
seq2  G-GAGATGGCTCACTATGAATCAGTTCCATTAATAA--TTTG-TAAACAC  745

seq1  ACTTTTTT--ATGGAGTTTTCTTATAATTTGGGAATTATTTTAGGATTCA  789
      ||||||||   ||||| |||||||||  ||  | |||||||||| |||||
seq2  ACTTTTTTTATTGGAG-TTTCTTATA--TTTAGCATTATTTTAGAATTCA  792