BAC Information

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BAC

Clone NameB6Ng01-198K01
Chromosome7 (Build37)
Map Location 129,124,651 - 129,264,613
singlet/doubletdoublet
Overlap geneCog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2
Upstream geneCdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b
Downstream geneDctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198K01.bB6Ng01-198K01.g
ACCGA020175GA020176
length871849
definitionB6Ng01-198K01.b B6Ng01-198K01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,263,748 - 129,264,613)(129,124,651 - 129,125,493)
sequence
gaattctctgcagtgggagaaagttcatacctggcacttcacagaggtat
gtccaagcctcagggctgaaaggtggatctgtgtcatttgtgatgtgaat
gaacagcttaacagggagctgtgactactcattgcaaactcagattccag
catttattatgagtgagacatctcagacgtaaagtttacattgagcactg
catgctcaccatctagactcgagtgtcaccatgacactttgtttgcttca
gcatgcttgccaggggagttctacagcagtctattgggaagcttgcatca
cttacctattctgataaactgctgacagtcatatttctttttcaccaaaa
cactattctattttccatagattatccttattcctcttcatacacctcta
atgtggctacagtactactgtgtttaaattactattattatcttattagt
gagtgtttgtgtatgatatgtgagtgtgaatgtgtgcatgagtgtgggag
tctgagaacagctttcaggaatcattctcgccttccgttgtgggtgccag
ggtttaaactcaggtctccaggattgtgtgacaagtatctttccctgcgg
aagcatcttgccagcccctgtttgaggtttttgaatccacttaaacattt
tatgtgtacatagttctttcttttggtgagaggagagtatttgagaaagg
tctcgtgtagcccaggtggcctggaactctccatggactgaagcgttcct
ctgaactccttgacccgctcccctttccctgtcaagtgctgggactgtag
gcacaccactggcctgggtttgttggatactcttcataggtatttgctct
tttttccccctgaactcacag
gaattcctgaccgtccagcaccacctccccagtgcggaaattaacggcgg
tcgccaccactcccagattgttattattattattattggggttttttttt
tgtttttagtttttagtttttaaaggaaatgttatggcatcgtcggacgt
gaacaccaaagcctagacctaactcagactactgcagggctcgctttccc
accaaaggagaggcttggcccctgggcccggtcctgcagtcgggtgccgg
ggcgggcgggtgggcgtctgcgtggctcaccctccacggcgtggttcacc
tcctggatgaacagctgcagcttcattaccagggtggctgcgtgaccgtc
cgccttccccgccgccccgtctttggggccggctctgaaggccgcattaa
tccagtccttcacgtcgaagtcgtcagccaggaacttggagaagtccatg
gcgcgcggtctccgggttggcgccgagcgacaccgccttcgggacacccg
tcgaaacccaccaagctttacttgccgccccgtcagcgcactcgcgccga
ggccgaatgtccctcgttcgcgcgccgtacttcttccggaagtcggtgcc
tatttaccatagcaactgttcctgttagagcagcgagcttcgcgcagtcc
ggacaggtacgacagttcgttttctgctcttattttgtcgagcagtaaac
taagtaaacgcgtgtttcctcaagactagaagatttgacgttctgagaag
ggagcagctgagaaatataaactctcgtatgtaggagtaatgtgctagtt
ttccgttcctcactaaatgcatacagcagtttgggttttttcgtttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129263748_129264613
seq2: B6Ng01-198K01.b_44_914 (reverse)

seq1  CTGTGAGTTCAGGGGGAAAAAAGAGCAAATACCTATGGAGAGTATCCAAC  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGTGAGTTCAGGGGGAAAAAAGAGCAAATACCTATGAAGAGTATCCAAC  50

seq1  AAACCCAGGCCCGTGGTGTGCCTACAGTCCCAGCACTTGACAGGGAAAGG  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGGCCAGTGGTGTGCCTACAGTCCCAGCACTTGACAGGGAAAGG  100

seq1  CGGGCGGGTC-AGGAGTTCAG-GGCACGCTTCAGTCCATGGAGAGTTCCA  148
       | ||||||| |||||||||| || |||||||||||||||||||||||||
seq2  GGAGCGGGTCAAGGAGTTCAGAGGAACGCTTCAGTCCATGGAGAGTTCCA  150

seq1  GGCCACCTGGGCTACACGAGACCTTTCTC-AATACTCTCCTCTCACC-AA  196
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  GGCCACCTGGGCTACACGAGACCTTTCTCAAATACTCTCCTCTCACCAAA  200

seq1  AGAAAGAACTATGTACACAT-AAATGTTTAAGTGGATTCAAAAACCTCAA  245
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGAAAGAACTATGTACACATAAAATGTTTAAGTGGATTCAAAAACCTCAA  250

seq1  ACAGGGGCTGGCAAGATGCTTCCGCAGGGAAAGATACTTGTCACACAATC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGCTGGCAAGATGCTTCCGCAGGGAAAGATACTTGTCACACAATC  300

seq1  CTGGAGACCTGAGTTTAAACCCTGGCACCCACAACGGAAGGCGAGAATGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACCTGAGTTTAAACCCTGGCACCCACAACGGAAGGCGAGAATGA  350

seq1  TTCCTGAAAGCTGTTCTCAGACTCCCACACTCATGCACACATTCACACTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAAAGCTGTTCTCAGACTCCCACACTCATGCACACATTCACACTC  400

seq1  ACATATCATACACAAACACTCACTAATAAGATAATAATAGTAATTTAAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCATACACAAACACTCACTAATAAGATAATAATAGTAATTTAAAC  450

seq1  ACAGTAGTACTGTAGCCACATTAGAGGTGTATGAAGAGGAATAAGGATAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGTACTGTAGCCACATTAGAGGTGTATGAAGAGGAATAAGGATAA  500

seq1  TCTATGGAAAATAGAATAGTGTTTTGGTGAAAAAGAAATATGACTGTCAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGAAAATAGAATAGTGTTTTGGTGAAAAAGAAATATGACTGTCAG  550

seq1  CAGTTTATCAGAATAGGTAAGTGATGCAAGCTTCCCAATAGACTGCTGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATCAGAATAGGTAAGTGATGCAAGCTTCCCAATAGACTGCTGTA  600

seq1  GAACTCCCCTGGCAAGCATGCTGAAGCAAACAAAGTGTCATGGTGACACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCCCTGGCAAGCATGCTGAAGCAAACAAAGTGTCATGGTGACACT  650

seq1  CGAGTCTAGATGGTGAGCATGCAGTGCTCAATGTAAACTTTACGTCTGAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCTAGATGGTGAGCATGCAGTGCTCAATGTAAACTTTACGTCTGAG  700

seq1  ATGTCTCACTCATAATAAATGCTGGAATCTGAGTTTGCAATGAGTAGTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCACTCATAATAAATGCTGGAATCTGAGTTTGCAATGAGTAGTCA  750

seq1  CAGCTCCCTGTTAAGCTGTTCATTCACATCACAAATGACACAGATCCACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCCTGTTAAGCTGTTCATTCACATCACAAATGACACAGATCCACC  800

seq1  TTTCAGCCCTGAGGCTTGGACATACCTCTGTGAAGTGCCAGGTATGAACT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCCTGAGGCTTGGACATACCTCTGTGAAGTGCCAGGTATGAACT  850

seq1  TTCTCCCACTGCAGAGAATTC  866
      |||||||||||||||||||||
seq2  TTCTCCCACTGCAGAGAATTC  871

seq1: chr7_129124651_129125493
seq2: B6Ng01-198K01.g_69_917

seq1  GAATTCCTGACCGTCCAGCACCACCTCCCCAGTGCGGAAATTAACGGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACCGTCCAGCACCACCTCCCCAGTGCGGAAATTAACGGCGG  50

seq1  TCGCCACCACTCCCAGATTGTTATTATTATTATTATTGGGGTTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCACCACTCCCAGATTGTTATTATTATTATTATTGGGGTTTTTTTTT  100

seq1  TGTTTTTAGTTTTTAGTTTTTAAAGGAAATGTTATGGCATCGTCGGACGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAGTTTTTAGTTTTTAAAGGAAATGTTATGGCATCGTCGGACGT  150

seq1  GAACACCAAAGCCTAGACCTAACTCAGACTACTGCAGGGCTCGCTTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCAAAGCCTAGACCTAACTCAGACTACTGCAGGGCTCGCTTTCCC  200

seq1  ACCAAAGGAGAGGCTTGGCCCCTGGGCCCGGTCCTGCAGTCGGGTGCCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGAGAGGCTTGGCCCCTGGGCCCGGTCCTGCAGTCGGGTGCCGG  250

seq1  GGCGGGCGGGTGGGCGTCTGCGTGGCTCACCCTCCACGGCGTGGTTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGCGGGTGGGCGTCTGCGTGGCTCACCCTCCACGGCGTGGTTCACC  300

seq1  TCCTGGATGAACAGCTGCAGCTTCATTACCAGGGTGGCTGCGTGACCGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATGAACAGCTGCAGCTTCATTACCAGGGTGGCTGCGTGACCGTC  350

seq1  CGCCTTCCCCGCCGCCCCGTCTTTGGGGCCGGCTCTGAAGGCCGCATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTCCCCGCCGCCCCGTCTTTGGGGCCGGCTCTGAAGGCCGCATTAA  400

seq1  TCCAGTCCTTCACGTCGAAGTCGTCAGCCAGGAACTTGGAGAAGTCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCCTTCACGTCGAAGTCGTCAGCCAGGAACTTGGAGAAGTCCATG  450

seq1  GCGCGCGGTCTCCGGGTTGGCGCCGAGCGACACCGCCTTCGGGACACCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCGGTCTCCGGGTTGGCGCCGAGCGACACCGCCTTCGGGACACCCG  500

seq1  TCGAAACCCACCAAGCTTTACTTGCCGCCCCGTCAGCGCACTCGCGCCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAACCCACCAAGCTTTACTTGCCGCCCCGTCAGCGCACTCGCGCCGA  550

seq1  GGCCGAATGTCCCTCG-TCGCGCGCCGTACTTCTTCCGGAAGTCGGTGCC  599
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGCCGAATGTCCCTCGTTCGCGCGCCGTACTTCTTCCGGAAGTCGGTGCC  600

seq1  TA-TTACCATAGCAACTGTTCCTGTTAGAGCAGCGAGCTTCGCGCAGTCC  648
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACCATAGCAACTGTTCCTGTTAGAGCAGCGAGCTTCGCGCAGTCC  650

seq1  GGACAGGTACGACAGTTCGTTTTCTGCTCTTA-TTTGTCGAGCAGTAAAC  697
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGACAGGTACGACAGTTCGTTTTCTGCTCTTATTTTGTCGAGCAGTAAAC  700

seq1  TAAGTAAACGCGTGTTTCCTCAAGACTAGAAGA-TTGACG-TCTGAGAAG  745
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TAAGTAAACGCGTGTTTCCTCAAGACTAGAAGATTTGACGTTCTGAGAAG  750

seq1  GGAGCAGCTGAGAAATATAAACTCT-GTATGTAGGAGTAATGTTGCTAGT  794
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  GGAGCAGCTGAGAAATATAAACTCTCGTATGTAGGAGTAATG-TGCTAGT  799

seq1  TTTCCG-TCCTCACTAAATGCATACAGCAGTTTGGGTTTTTTGGTTTTTT  843
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTCCGTTCCTCACTAAATGCATACAGCAGTTTGGGTTTTTTCGTTTTTT  849