BAC Information

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BAC

Clone NameB6Ng01-198M07
Chromosome7 (Build37)
Map Location 74,393,387 - 74,530,158
singlet/doubletdoublet
Overlap geneMef2a
Upstream geneLrrk1, Aldh1a3, Asb7, Lins2, Lass3, Adamts17, Lysmd4
Downstream geneEG665304, Lrrc28, Ttc23, Dmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198M07.bB6Ng01-198M07.g
ACCGA020282GA020283
length7101,117
definitionB6Ng01-198M07.b B6Ng01-198M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,393,387 - 74,394,094)(74,529,042 - 74,530,158)
sequence
gaattccagcatggagttgggagaagtggacacaaagtcccagccctagc
tgagaagctattggctgctaagagatggagagtcagtttcctttaacgtt
atgatccctagtaggccatactagaggacagtttccacaatgacaccaca
aagggactctgtaaattttgttttgtttttaaaaaagaagacacaaattt
gggtgggtaggaggatatctagatgtagttgtgggagtgaattcatcaaa
atacactgaataaattttttaaataactaatgaaaatattatttttaaag
gtaaatttatggttatatttctacattaagatacctttctgagactgatt
tctactgattatggacagagtcagttcttataaatttgctaagttttatt
ttatgaaacataatggtctattttgatgaaatgttccttaagtatctctt
aagttaatataaaaatgacactgcctacctttctaaactagtaactccaa
gttaatttgaaaaaacatcaaacaaacattaactgaaggacattttatag
aacatgtgagcagtgttcctcataaatgctaaggtcacttaagccaagtc
ttagaaactctcatggcctataataattgaataagacaagattaataaat
tgaaatatgctataaaacattattggctctggcatgaagaaagattaagt
ttaaaactta
gaattcagacgaaagatttacttctagcagatgcacaacagaaccttgca
agtgtcctgatggttttcttctctggtctcccatcccccatcagccaggc
tgccaagatgggttttgctccagcaactctggagcggccttgagtcattc
acatcaaaggccttgcaggcaccggacggttctggcctgggatctcctcc
aagctgcttgtgacttatctgtctctggattgttctaggagctgacccct
tccaatgtggttctgggatagcctgagatctcatgcaggtgtgactttct
ttggttggtagtagtcacttcttgcattgtgggagtggcaaattcattcc
tcttacatagagccattatctatctgggtatgtccaaaaccacgcttact
taatccagaaatgatgggttatgttagagagtaaagagggaagaaaagag
tagaagctaaagcatcaacagattggactgatcaagagggatttgtcttc
ttaaccaagactgcagctagccaaccgagttaaatgaaaaactataacag
tggtcctcatggttgggtgcacatcaaaatcacccaagaactcttaaaaa
gatgccaagactgtcgccaaggccaactaaatcagaagatactggggaaa
gctctgacattttcttgaagctcttcagataatcctaaggcagtcaagtt
aagaaccatacctaggaagcaaaggagcagatctgtctcacagaccttgg
tccagtggagtttgaaacataatttgtaaaacatggagcgcctgatcgag
gagctctgcagcaacgtgagggaacactacattaaaatctgggtagacgc
ttacaccagagtgactatgcctaagaacccaagaggaactgcagaagtct
ggcaatgcagatagtttagaagggttagccctgactcagagtctccttct
ctcatgaaagggggaggattgggtgtttagttactgctctttttctgtgc
agaatcagcactcaaaccaagttactcttataaaagaaggcatttatgta
agagtgcttgcttacttaggacgtcagtcatgatctatcatggtaggaag
tcagacaggcatagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74393387_74394094
seq2: B6Ng01-198M07.b_45_754

seq1  GAATTCCAGCATGGAGTTGGGAGAAGTGGACACAAAGTCCCAGCCCTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATGGAGTTGGGAGAAGTGGACACAAAGTCCCAGCCCTAGC  50

seq1  TGAGAAGCTATTGGCTGCTAAGAGATGGAGAGTCAGTTTCCTTTAACGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCTATTGGCTGCTAAGAGATGGAGAGTCAGTTTCCTTTAACGTT  100

seq1  ATGATCCCTAGTAGGCCATACTAGAGGACAGTTTCCACAATGACACCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCCTAGTAGGCCATACTAGAGGACAGTTTCCACAATGACACCACA  150

seq1  AAGGGACTCTGTAAATTTTGTTTTGTTTTTAAAAAAGAAGACACAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACTCTGTAAATTTTGTTTTGTTTTTAAAAAAGAAGACACAAATTT  200

seq1  GGGTGGGTAGGAGGATATCTAGATGTAGTTGTGGGAGTGAATTCATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGTAGGAGGATATCTAGATGTAGTTGTGGGAGTGAATTCATCAAA  250

seq1  ATACACTGAATAAATTTTTTAAATAACTAATGAAAATATTATTTTTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGAATAAATTTTTTAAATAACTAATGAAAATATTATTTTTAAAG  300

seq1  GTAAATTTATGGTTATATTTCTACATTAAGATACCTTTCTGAGACTGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTATGGTTATATTTCTACATTAAGATACCTTTCTGAGACTGATT  350

seq1  TCTACTGATTATGGACAGAGTCAGTTCTTATAAATTTGCTAAGTTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGATTATGGACAGAGTCAGTTCTTATAAATTTGCTAAGTTTTATT  400

seq1  TTATGAAACATAATGGTCTATTTTGATGAAATGTTCCTTAAGTATCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAACATAATGGTCTATTTTGATGAAATGTTCCTTAAGTATCTCTT  450

seq1  AAGTTAATATAAAAATGACACTGCCTACCTTTCTAAACTAGTAACTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAATATAAAAATGACACTGCCTACCTTTCTAAACTAGTAACTCCAA  500

seq1  GTTAATTTGAAAAAACATCAAACAAACATTAACTGAAGGACATTTTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTGAAAAAACATCAAACAAACATTAACTGAAGGACATTTTATAG  550

seq1  AACATGTGAGCAGTGTTCCTCAAAAATGCTAAGGTCACTTAAGCCAAGTC  600
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACATGTGAGCAGTGTTCCTCATAAATGCTAAGGTCACTTAAGCCAAGTC  600

seq1  TTAGAAACTCTCATGGCCTAGAAGAATTGAAGAAGACAAGATTAATAAA-  649
      |||||||||||||||||||| || ||||||| ||||||||||||||||| 
seq2  TTAGAAACTCTCATGGCCTATAATAATTGAATAAGACAAGATTAATAAAT  650

seq1  TGAAATATGCTATAAAACA-TAGTGGCTCTGGCATGAAGAAAGATGAAGT  698
      ||||||||||||||||||| || |||||||||||||||||||||| ||||
seq2  TGAAATATGCTATAAAACATTATTGGCTCTGGCATGAAGAAAGATTAAGT  700

seq1  TTAAAACTTA  708
      ||||||||||
seq2  TTAAAACTTA  710

seq1: chr7_74529042_74530158
seq2: B6Ng01-198M07.g_66_1182 (reverse)

seq1  CAAC-ATGCCTGTCTG-CTTCCCACCATGAT-GATCCTGAACTGACCCTC  47
      |||| ||||||||||| ||||| |||||||| |||| || ||||||   |
seq2  CAACTATGCCTGTCTGACTTCCTACCATGATAGATCATG-ACTGACGTCC  49

seq1  TAAAAGTAAGCAAGCCCCTCTTTACATAAATGCTTTCTTTTTATAAGCGT  97
      |  ||||||||||| | ||| |||||||||||| ||| ||||||||| ||
seq2  T--AAGTAAGCAAG-CACTC-TTACATAAATGCCTTC-TTTTATAAGAGT  94

seq1  TACCTTGTTT--GTGCTGTTTCTGCACAG-AAAAGAGCAGTAACTAAGAC  144
       || | ||||  |||||| |||||||||| ||||||||||||||||| ||
seq2  AACTTGGTTTGAGTGCTGATTCTGCACAGAAAAAGAGCAGTAACTAA-AC  143

seq1  ACCC-ATCCTCCCCCTTTCCATGGAGAGAAGGAGACTCTGAGTCAGGGCT  193
      |||| ||||||||||||| ||| |||||||||||||||||||||||||||
seq2  ACCCAATCCTCCCCCTTT-CAT-GAGAGAAGGAGACTCTGAGTCAGGGCT  191

seq1  ACCCTTTCT-AACTATCTGCATTGCCAGACTTCTGCAGTTCCTCTT-GGT  241
      | || |||| |||||||||||||||||||||||||||||||||||| |||
seq2  AACCCTTCTAAACTATCTGCATTGCCAGACTTCTGCAGTTCCTCTTGGGT  241

seq1  TCTTAGGCATAGTCACTCTGGTGTAAGCGTCTACCCAGATTTTAATGTAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGCATAGTCACTCTGGTGTAAGCGTCTACCCAGATTTTAATGTAG  291

seq1  TGTTCCCTCACGTTGCTGCAGAGCTCCTCGATCAGGCGCTCCATGTTTTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTCACGTTGCTGCAGAGCTCCTCGATCAGGCGCTCCATGTTTTA  341

seq1  CAAATTATGTTTCAAACTCCACTGGACCAAGGTCTGTGAGACAGATCTGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATGTTTCAAACTCCACTGGACCAAGGTCTGTGAGACAGATCTGC  391

seq1  TCCTTTGCTTCCTAGGTATGGTTCTTAACTTGACTGCCTTAGGATTATCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGCTTCCTAGGTATGGTTCTTAACTTGACTGCCTTAGGATTATCT  441

seq1  GAAGAGCTTCAAGAAAATGTCAGAGCTTTCCCCAGTATCTTCTGATTTAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCTTCAAGAAAATGTCAGAGCTTTCCCCAGTATCTTCTGATTTAG  491

seq1  TTGGCCTTGGCGACAGTCTTGGCATCTTTTTAAGAGTTCTTGGGTGATTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTTGGCGACAGTCTTGGCATCTTTTTAAGAGTTCTTGGGTGATTT  541

seq1  TGATGTGCACCCAACCATGAGGACCACTGTTATAGTTTTTCATTTAACTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGCACCCAACCATGAGGACCACTGTTATAGTTTTTCATTTAACTC  591

seq1  GGTTGGCTAGCTGCAGTCTTGGTTAAGAAGACAAATCCCTCTTGATCAGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCTAGCTGCAGTCTTGGTTAAGAAGACAAATCCCTCTTGATCAGT  641

seq1  CCAATCTGTTGATGCTTTAGCTTCTACTCTTTTCTTCCCTCTTTACTCTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTGTTGATGCTTTAGCTTCTACTCTTTTCTTCCCTCTTTACTCTC  691

seq1  TAACATAACCCATCATTTCTGGATTAAGTAAGCGTGGTTTTGGACATACC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAACCCATCATTTCTGGATTAAGTAAGCGTGGTTTTGGACATACC  741

seq1  CAGATAGATAATGGCTCTATGTAAGAGGAATGAATTTGCCACTCCCACAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGATAATGGCTCTATGTAAGAGGAATGAATTTGCCACTCCCACAA  791

seq1  TGCAAGAAGTGACTACTACCAACCAAAGAAAGTCACACCTGCATGAGATC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAAGTGACTACTACCAACCAAAGAAAGTCACACCTGCATGAGATC  841

seq1  TCAGGCTATCCCAGAACCACATTGGAAGGGGTCAGCTCCTAGAACAATCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTATCCCAGAACCACATTGGAAGGGGTCAGCTCCTAGAACAATCC  891

seq1  AGAGACAGATAAGTCACAAGCAGCTTGGAGGAGATCCCAGGCCAGAACCG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGATAAGTCACAAGCAGCTTGGAGGAGATCCCAGGCCAGAACCG  941

seq1  TCCGGTGCCTGCAAGGCCTTTGATGTGAATGACTCAAGGCCGCTCCAGAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTGCCTGCAAGGCCTTTGATGTGAATGACTCAAGGCCGCTCCAGAG  991

seq1  TTGCTGGAGCAAAACCCATCTTGGCAGCCTGGCTGATGGGGGATGGGAGA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGAGCAAAACCCATCTTGGCAGCCTGGCTGATGGGGGATGGGAGA  1041

seq1  CCAGAGAAGAAAACCATCAGGACACTTGCAAGGTTCTGTTGTGCATCTGC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAAGAAAACCATCAGGACACTTGCAAGGTTCTGTTGTGCATCTGC  1091

seq1  TAGAAGTAAATCTTTCGTCTGAATTC  1117
      ||||||||||||||||||||||||||
seq2  TAGAAGTAAATCTTTCGTCTGAATTC  1117