MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-198M09
Chromosome	7 (Build37)
Map Location	56,405,886 - 56,560,885
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465, 9130015G15Rik
Downstream gene	5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5, Nell1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mrgprb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404239 MGI:3033121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233230 MGI:3033119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620137 MGI:3033193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins

name	Mrgprb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404240 MGI:3033134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233231 MGI:3033115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243978 MGI:3588270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243979 MGI:2441674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb9-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404253 MGI:3033133
definition	gene_synonym : MrgB9 note : MAS-related GPR, member B9, pseudogene pseudo : _no_value

name	Mrgprb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404238 MGI:3033117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639116 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639116 MGI:3646194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins

name	Zdhhc13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243983 MGI:1919227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csrp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13009 MGI:1330824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E2f8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108961 MGI:1922038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040465 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	9130015G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74567 MGI:1921817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	5330421F07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78286 MGI:1925536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dbx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13172 MGI:94867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htatip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53415 MGI:1859271
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prmt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71974 MGI:1919224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc6a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104245 MGI:105090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nell1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338352 MGI:2443902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430531 GeneID:404239 MGI:3033121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B5 transcript_id : NM_207538.1

name	Mrgprb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45429987 GeneID:233230 MGI:3033119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B4 transcript_id : NM_205795.1

name	Mrgprb13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82906020 GeneID:620137 MGI:3033193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins product : MAS-related GPR, member B13 transcript_id : XM_884524.1

name	Mrgprb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430533 GeneID:404240 MGI:3033134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B8 transcript_id : NM_207539.1

name	Mrgprb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356046 GeneID:233231 MGI:3033115
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B1 transcript_id : NM_205810.3

name	Mrgprx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802509 GeneID:243978 MGI:3588270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member X2 transcript_id : NM_001034868.2

name	Mrgprb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801044 GeneID:243979 MGI:2441674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B2 transcript_id : NM_175531.3

name	Mrgprb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46430529 GeneID:404238 MGI:3033117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member B3 transcript_id : NM_207537.1

name	EG639116 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257275 GeneID:639116 MGI:3646194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 38 Proteins product : predicted gene, EG639116 transcript_id : XM_001474703.1

name	Zdhhc13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354488 GeneID:243983 MGI:1919227
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 13 transcript_id : NM_028031.2

name	Csrp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476047 GeneID:13009 MGI:1330824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and glycine-rich protein 3 transcript_id : NM_013808.3

name	E2f8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380194 GeneID:108961 MGI:1922038
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E2F transcription factor 8 transcript_id : NM_001013368.4

name	LOC100040465 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257277 GeneID:100040465
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100040465 transcript_id : XM_001474722.1

name	9130015G15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257320 GeneID:74567 MGI:1921817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 9130015G15 gene transcript_id : XM_001477673.1

name	5330421F07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341493 GeneID:78286 MGI:1925536
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330421F07 gene transcript_id : NM_175272.2

name	Dbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52421337 GeneID:13172 MGI:94867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developing brain homeobox 1 transcript_id : NM_001005232.1

name	Htatip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475634 GeneID:53415 MGI:1859271
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HIV-1 tat interactive protein 2, homolog (human) transcript_id : NM_016865.2

name	Prmt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347894 GeneID:71974 MGI:1919224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein arginine N-methyltransferase 3 transcript_id : NM_133740.2

name	Slc6a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26080427 GeneID:104245 MGI:105090
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, glycine), member 5 transcript_id : NM_148931.2

name	Nell1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130973 GeneID:338352 MGI:2443902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NEL-like 1 (chicken) transcript_id : NM_001037906.2

name	Mrgprb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430532 CCDS:CCDS21300.1 GeneID:404239 MGI:3033121
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B5 protein_id : NP_997421.1

name	Mrgprb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45429988 CCDS:CCDS21301.1 GeneID:233230 MGI:3033119
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : MrgB4 G protein-coupled receptor product : MAS-related GPR, member B4 protein_id : NP_991364.1

name	Mrgprb13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906021 GeneID:620137 MGI:3033193
definition	codon_start : 1 product : similar to MRGB8 protein_id : XP_889617.1

name	Mrgprb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430534 CCDS:CCDS21302.1 GeneID:404240 MGI:3033134
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B8 protein_id : NP_997422.1

name	Mrgprb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370266 GeneID:233231 MGI:3033115
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : MrgB1 G protein-coupled receptor product : MAS-related GPR, member B1 protein_id : NP_991379.2

name	Mrgprx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781696 GeneID:243978 MGI:3588270
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : MAS-related GPR, member B10 protein_id : NP_001030040.1

name	Mrgprb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425306 CCDS:CCDS21303.1 GeneID:243979 MGI:2441674
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : MAS-related GPR, member B2 protein_id : NP_780740.1

name	Mrgprb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430530 CCDS:CCDS21304.1 GeneID:404238 MGI:3033117
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS-related GPR, member B3 protein_id : NP_997420.1

name	EG639116 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257276 GeneID:639116 MGI:3646194
definition	codon_start : 1 product : similar to MrgB2 G protein-coupled receptor protein_id : XP_001474753.1

name	Zdhhc13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229145 GeneID:243983 MGI:1919227
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : HIP14-related protein product : zinc finger, DHHC domain containing 13 protein_id : NP_082307.1

name	Csrp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304987 CCDS:CCDS21305.1 GeneID:13009 MGI:1330824
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IGI]; GO:0002026 - cardiac inotropy [Evidence IGI]; GO:0048738 - cardiac muscle development [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007519 - striated muscle development [Evidence IEA] codon_start : 1 note : cysteine-rich protein 3; muscle LIM protein; cardiac LIM protein product : cysteine and glycine-rich protein 3 protein_id : NP_038836.1

name	E2f8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67972650 GeneID:108961 MGI:1922038
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E2f family member 8 protein_id : NP_001013386.2

name	LOC100040465 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257278 GeneID:100040465
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474772.1

name	9130015G15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149257321 GeneID:74567 MGI:1921817
definition	codon_start : 1 product : hypothetical protein LOC74567 protein_id : XP_001477723.1

name	5330421F07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424928 GeneID:78286 MGI:1925536
definition	codon_start : 1 product : hypothetical protein LOC78286 protein_id : NP_780481.1

name	Dbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52421338 CCDS:CCDS21306.1 GeneID:13172 MGI:94867
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Mmox C product : developing brain homeobox 1 protein_id : NP_001005232.1

name	Htatip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15723368 GeneID:53415 MGI:1859271
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0051170 - nuclear import [Evidence ISS]; GO:0043068 - positive regulation of programmed cell death [Evidence ISS]; GO:0046022 - positive regulation of transcription from RNA polymerase II promoter, mitotic [Evidence ISS]; GO:0046777 - protein amino acid autophosphorylation [Evidence ISS]; GO:0045765 - regulation of angiogenesis [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence ISS] codon_start : 1 note : tat-interacting protein 30 kDa; HIV-1 tat interactive protein 2, 30 kDa homolog product : HIV-1 tat interactive protein 2, homolog protein_id : NP_058561.1

name	Prmt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789323 CCDS:CCDS21307.1 GeneID:71974 MGI:1919224
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : protein arginine methyltransferase 3; heterogeneous nuclear ribonucleoprotein methyltransferase-like 3 product : protein arginine N-methyltransferase 3 protein_id : NP_598501.1

name	Slc6a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507331 CCDS:CCDS21308.1 GeneID:104245 MGI:105090
definition	GO_component : GO:0005624 - membrane fraction [Evidence IEA] GO_function : GO:0005279 - amino acid-polyamine transporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006865 - amino acid transport [Evidence IEA]; GO:0007269 - neurotransmitter secretion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glycine transporter 2 product : solute carrier family 6 (neurotransmitter transporter, glycine), member 5 protein_id : NP_683733.1

name	Nell1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776571 CCDS:CCDS21309.1 GeneID:338352 MGI:2443902
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : protein kinase C-binding protein NELL1 protein_id : NP_001032995.1

clone name	MSMg01-276D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441K19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-362E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320G09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-198M09.b	B6Ng01-198M09.g
ACC	GA020286	GA020287
length	1,126	1,155
definition	B6Ng01-198M09.b	B6Ng01-198M09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(56,405,886 - 56,407,005)	(56,559,760 - 56,560,885)
sequence	gaattcagagcacagggttcctccagagaggcatttttagttacacatcc atcatataagttgcttttaccgaagagcaatgtaaaagttttaagtggaa tatggtggcattcaaaggtaggagcacaaggttgaggagttgaagaccag agtcagctattcggtaagttcaagttcaagaacagcctatggctactgag atcctggctcaaaacacagaacgaatgagagaacatctaatccaaaatag caaaaacaagccagtccaggagccaacacacttgagcatggcagcccaga gctgggttccaaagggaagcgtactgtggttgattagcaatgtttgccat agtcacacagagcatgctagattattatcttgtgtcttcatagactccat agttttggataatgcccatagaagaaacatagtaagtgacagccacttat cattcagtatagagcaaaattggaggatccttggcactgcccagagccag aatgagaaaggccggggaatgaaaacctctgttggaaaacaagggcctag caagactgcagcggctgctggaacttctgagagcaaagaccagcaatata ggcagagcacagggtgatgtaacttggaatcctctcggttgggtctgctt cctgctcacttgtgccggataagacaggatgaagaagcctgcagtcatgg ggtaggcatgaacccagtggacaaatggcaggtggctgctggctctcctt tcctctatggtgcatcctatggagacctgggcacaaagtacccttcagcc cataggtaccaagacttatatcttatcttagggtttttattgcttcaaca aatcaccatgaccaaatttgaaggggctattcagcttacacttctagaat gctgttcataagagaaggaaatcaggacaggaactcaaacgggacaggaa cctgggaggcaggagctaatgtagaagccatgggaaaggtgctgcttact gtcttgctcctcatggcttgctcagcctaccttcttatagaacccaggac caccattccacagatagcacccaccgcagtggactgggccctcctccttg atcactaattggagaaaaaatgcccg	gaattccagtttatccatcctattttctattgagctcttatatatcaagc tcagaatgggatctgcaaagtgggaacctttccccccaaccccaaatgcg atgggtttattttaccctgatccactggatgctgaaggcactgaccagac cacagcactctctgacttctgggggaaagtttacaatccctgccagccga aaccatcagataaaacaaaacagagcaaacaaacaaacaaacaaacaaaa actccaccacatcttaagccaaagccagacaaacctttggatcccatttc ctgcttgagatgggaaaaaaaaaaaaatcagcccacctggagcagcaagg agagcactgctggtctcacctttcctgggagggagcagcagttactattt ggaaatggagggagggaaaaggcgtctgaagcctgcaggcttcttgcaag cttaaaatggagctaccacactgtgagaggaaaaataagaagaggggctg cacgttcccaccttccaaccccaaatgagctagaccacaagtgagcagca cccatgtgcatccgaagagactacaacacaatgctgggcagggatccagc aggcagaccacgctgcctcaagtcctgtctggagaacgcagctctgcacc aaggaaatgacccttgaggtgcaactgcagaagcctcaggaattaatagg tggaagggatggggacataagtcagttcagctctgctttcttgtgcgagc gcgcgcgcgcgcgcgcacacacgcacacacacacacacacacacacacac acacacacatacacacacacacacacacatacacacacacacccttcaag ataaaaaagaaataccaactgtggatcggggggttttccactccagcaac aattcagggatggtcaggaagagaccacagtagaagcttggtgagtctgc agtggtgcccttaccagcttcatgggtaggaaattgtttcttgttcccag gcggccacaggcatccacgcttcatctttacttcaagggtggaggaacgt tgggggaagagggaaaaggaaagtagaaaatagggaagcgagcaccttgt cggttgggtactggtccgggcgccaggtcggccacaccgttctgcaagcc tgggg
quality values	Open. Hide. 58 26 19 35 58 34 25 54 58 54 39 46 52 39 62 49 49 62 62 62 62 62 62 47 32 62 49 47 48 54 62 34 31 22 26 32 38 42 37 21 32 25 32 56 43 59 44 62 62 59 47 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 59 59 59 59 43 54 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 54 54 62 62 62 62 59 62 62 59 59 62 62 59 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 54 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 54 46 58 58 58 58 54 45 58 58 58 58 58 58 58 58 58 58 58 58 58 54 47 58 54 58 58 54 58 58 58 52 58 54 58 58 49 33 58 58 58 48 52 58 58 58 58 58 58 58 58 58 58 49 38 38 58 58 54 58 58 58 53 58 50 51 52 58 58 52 51 41 54 51 53 58 52 58 58 51 54 54 54 58 51 51 53 58 31 58 51 52 53 53 58 58 51 58 44 41 58 53 39 46 44 58 58 58 44 58 54 53 50 51 51 53 58 54 48 54 46 50 48 58 40 50 52 51 54 50 58 58 46 54 54 58 50 51 45 41 47 58 44 51 52 54 52 58 40 58 46 21 40 54 37 46 32 52 41 58 39 37 49 58 43 21 58 51 26 51 49 49 58 53 53 32 39 53 39 52 49 54 54 51 37 53 30 54 32 39 40 49 38 50 32 54 50 45 42 52 54 54 37 31 25 42 40 42 53 51 37 47 16 54 37 54 49 32 42 52 38 35 46 54 35 51 53 40 45 35 44 54 45 26 45 39 45 45 35 40 35 54 31 53 42 40 39 40 51 39 45 38 45 51 41 32 31 18 51 39 47 49 46 32 29 34 31 51 53 40 40 32 31 47 40 41 45 40 33 24 40 49 21 29 32 33 10 53 32 25 32 36 34 33 32 42 24 37 53 32 32 30 31 37 31 36 24 27 31 45 32 27 31 51 33 38 51 51 46 33 28 28 41 41 31 33 30 35 30 31 40 29 51 34 31 31 31 31 40 32 39 31 16 12 27 24 46 24 30 48 31 31 38 41 25 46 46 41 27 31 31 20 30 31 27 32 30 32 33 31 31 23 31 32 43 38 36 31 31 33 32 25 30 19 34 31 31 31 31 26 31 31 33 20 37 10 32 26 21 31 31 48 19 26 32 31 24 24 27 27 20 19 21 26 25 25 37 27 30 41 28 26 26 44 21 19 27 22 25 18 25 14 14 26 30 10 41 10 28 12 21 19 19 24 12 38 15 32 36 19 21 31 42 28 32 22 33 31 17 24 26 18 20 10 37 9 33 40 25 12 30 12 20 31 32 30 25 20 20 14 21 27 32 14 19 12 16 24 15 32 33 15 32 27 22 17 30 26 14 22 24 22 13 21 24 22 10 18 15 10 16 14 17 25 20 23 21 7 8 15 17 28 28 21 7 16 12 6 8 6 9 12 19 14 16 25 9 18 16 16 16 8 9 13 6 14 15 24 22 11 13 7 34 11 6 17 8 11 23 20 7 6 11 17 4 10 18 19 47 24 6 40 13 4 6 19 5 10 19 5 15 18 14 18 16 10 23 12 8 10 13 12 7 7 21 4 6 18 28 29 18 20 9 7 11 26 22 7	Open. Hide. 62 47 59 59 62 62 47 36 62 62 59 46 50 46 59 59 28 43 34 34 28 62 54 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 54 62 59 62 62 62 62 62 62 54 54 59 62 62 54 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 59 59 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 59 59 62 62 62 54 62 62 62 49 49 54 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 56 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 59 62 62 44 44 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 49 49 44 56 56 62 56 62 56 51 56 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 47 51 62 56 43 43 62 56 62 62 62 62 62 62 56 56 56 56 56 56 62 56 56 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 56 62 46 56 62 56 62 62 43 62 56 62 62 62 56 62 49 38 47 43 62 62 62 62 62 62 47 52 51 50 62 54 52 62 62 62 62 62 48 62 62 62 62 62 62 62 62 62 62 52 52 58 54 58 43 52 39 43 58 58 58 58 58 52 52 58 58 58 58 52 54 54 52 52 54 47 54 42 58 54 58 54 58 58 58 52 58 54 52 52 36 42 52 44 48 48 58 52 52 52 52 54 53 54 50 58 45 39 58 22 38 40 54 48 58 48 58 43 41 54 54 48 54 58 50 51 51 58 58 51 49 43 51 33 32 47 51 58 52 50 47 47 48 58 50 58 41 46 46 46 37 51 48 58 51 58 58 54 46 49 50 47 45 41 37 54 50 58 50 53 53 58 43 43 39 58 42 39 32 51 50 36 46 53 53 51 50 49 33 43 35 50 50 37 41 41 46 22 19 50 37 19 38 43 48 50 54 28 22 41 32 49 37 49 38 50 40 47 50 50 18 58 58 27 54 50 50 53 33 37 51 35 39 34 45 34 38 39 50 50 58 32 51 49 39 50 24 51 46 32 31 42 54 54 44 24 21 29 49 52 40 42 52 39 53 32 46 51 28 21 35 42 39 34 45 40 32 33 54 21 29 38 40 44 44 52 53 37 49 30 40 54 32 54 42 46 40 44 27 45 35 45 42 51 40 40 32 39 24 30 32 42 45 53 45 25 47 24 47 24 42 19 52 32 27 9 33 25 24 15 33 13 33 25 32 21 33 23 32 31 47 23 35 25 36 28 36 19 32 13 31 9 46 32 47 21 40 25 40 21 36 13 36 20 33 16 26 11 16 9 28 24 33 6 31 16 28 9 24 11 41 21 23 22 20 16 19 11 8 14 23 31 13 32 45 40 40 40 33 13 41 37 21 15 11 12 27 18 31 28 30 32 20 32 24 10 21 26 23 42 40 40 37 14 10 43 40 29 27 16 6 12 27 24 17 23 12 27 8 10 32 15 27 25 41 31 24 11 39 21 16 14 14 22 35 26 6 7 14 9 16 6 10 5 10 17 27 15 7 6 8 5 11 9 31 13 7 21 20 41 13 23 18 16 28 14 28 21 10 11 31 27 25 11 19 26 15 28 26 36 24 14 24 30 23 25 15 24 29 22 8 10 9 23 30 44 18 8 6 25 18 32 36 13 32 25 32 14 30 7 12 9 5 7 14 18 18 24 33 10 7 9 12 7 6 29 29 7 17 14 8 6 19 16 12 8 14 11 31 14 24 11 9 18 23 18 10 7 32 13 21 22 8 22 6 5 7 32 39 11 10 27 8 20 8 22 5 3 3 11 6 5 8 29 28 32 3 3 3 4 13 5 15 10 19 29 28 7 14 9 8 21 11 11 7 13 5 3 10 9 22 6 18 16 30 6 5 3 3 16 4 6 3 4 9 21 16 10 7 5 3 5 7 6 14 14 9 11 11 4 4 7 15 6 17 3 4 11 7 22 6 3 5 11 16 8 13 15 8 4 4 4 6 6 4 4 4 7 16 11 7 21 4 10 4 1 2 3 1 4 2 2 4 15 9 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_56405886_56407005
seq2: B6Ng01-198M09.b_50_1175

seq1  GAATTCAGAGCACAGGGTTCCTCCAGAGAGGCATTTTTAGTTACACATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCACAGGGTTCCTCCAGAGAGGCATTTTTAGTTACACATCC  50

seq1  ATCATATAAGTTGCTTTTACCGAAGAGCAATGTAAAAGTTTTAAGTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATAAGTTGCTTTTACCGAAGAGCAATGTAAAAGTTTTAAGTGGAA  100

seq1  TATGGTGGCATTCAAAGGTAGGAGCACAAGGTTGAGGAGTTGAAGACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGGCATTCAAAGGTAGGAGCACAAGGTTGAGGAGTTGAAGACCAG  150

seq1  AGTCAGCTATTCGGTAAGTTCAAGTTCAAGAACAGCCTATGGCTACTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCTATTCGGTAAGTTCAAGTTCAAGAACAGCCTATGGCTACTGAG  200

seq1  ATCCTGGCTCAAAACACAGAACGAATGAGAGAACATCTAATCCAAAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGCTCAAAACACAGAACGAATGAGAGAACATCTAATCCAAAATAG  250

seq1  CAAAAACAAGCCAGTCCAGGAGCCAACACACTTGAGCATGGCAGCCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAGCCAGTCCAGGAGCCAACACACTTGAGCATGGCAGCCCAGA  300

seq1  GCTGGGTTCCAAAGGGAAGCGTACTGTGGTTGATTAGCAATGTTTGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTCCAAAGGGAAGCGTACTGTGGTTGATTAGCAATGTTTGCCAT  350

seq1  AGTCACACAGAGCATGCTAGATTATTATCTTGTGTCTTCATAGACTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACAGAGCATGCTAGATTATTATCTTGTGTCTTCATAGACTCCAT  400

seq1  AGTTTTGGATAATGCCCATAGAAGAAACATAGTAAGTGACAGCCACTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGGATAATGCCCATAGAAGAAACATAGTAAGTGACAGCCACTTAT  450

seq1  CATTCAGTATAGAGCAAAATTGGAGGATCCTTGGCACTGCCCAGAGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTATAGAGCAAAATTGGAGGATCCTTGGCACTGCCCAGAGCCAG  500

seq1  AATGAGAAAGGCCGGGGAATGAAAACCTCTGTTGGAAAACAAGGGCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAAGGCCGGGGAATGAAAACCTCTGTTGGAAAACAAGGGCCTAG  550

seq1  CAAGACTGCAGCGGCTGCTGGAACTTCTGAGAGCAAAGACCAGCAATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGCAGCGGCTGCTGGAACTTCTGAGAGCAAAGACCAGCAATATA  600

seq1  GGCAGAGCACAGGGTGATGTAACTTGGAATCCTCTCGGTTGGGTCTGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCACAGGGTGATGTAACTTGGAATCCTCTCGGTTGGGTCTGCTT  650

seq1  CCTGCTCACTTGTGCCGGATAAGACAGGATGAAGAAGCCTGCAGTCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCACTTGTGCCGGATAAGACAGGATGAAGAAGCCTGCAGTCATGG  700

seq1  GGTAGGCATGAACCCAGTGGACAAATGGCAGGTGGCTGCTGGCTCTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCATGAACCCAGTGGACAAATGGCAGGTGGCTGCTGGCTCTCCTT  750

seq1  TCCTCTATGGTGCATCCTATGGAGACCTGGGCACAAAGTACCCTTCAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTATGGTGCATCCTATGGAGACCTGGGCACAAAGTACCCTTCAGCC  800

seq1  CATAGGTACCAAGACTTATATCTTATCTTAGGGTTTTTATTGCTTCAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTACCAAGACTTATATCTTATCTTAGGGTTTTTATTGCTTCAACA  850

seq1  AATCACCATGACCAAATTTGAAGGGGCTATTCAGCTTACACTTCTAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCATGACCAAATTTGAAGGGGCTATTCAGCTTACACTTCTAGAAT  900

seq1  GCTGTTCATAAGAGAAGGAAATCAGGACAGGAACTCAAACGGGACAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCATAAGAGAAGGAAATCAGGACAGGAACTCAAACGGGACAGGAA  950

seq1  CCT-GGAGGCAGGAGCTAATGTAGAAGCCAT-GGAAAGGTGCTGCTTACT  998
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTGGGAGGCAGGAGCTAATGTAGAAGCCATGGGAAAGGTGCTGCTTACT  1000

seq1  GTCTTGCTCCTCATGGCTTGCTCAGCCTACCTTCTTATAGAACCCAGGAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCTCCTCATGGCTTGCTCAGCCTACCTTCTTATAGAACCCAGGAC  1050

seq1  CACCATTCCACAGATAGCA-CCACCGCAGTGGACTGGGCCCTCCCCCTTG  1097
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  CACCATTCCACAGATAGCACCCACCGCAGTGGACTGGGCCCTCCTCCTTG  1100

seq1  ATCACTAATT---GAGAAAATGCCCG  1120
      ||||||||||   || ||||||||||
seq2  ATCACTAATTGGAGAAAAAATGCCCG  1126

seq1: chr7_56559760_56560885
seq2: B6Ng01-198M09.g_65_1219 (reverse)

seq1  CCCCAGGGGCTGCAGAACG--GTGGACGACCTGGCGCCCGGGCCAG-ACC  47
      ||||| ||  |||||||||  |||| ||||||||||||||| |||| |||
seq2  CCCCA-GGCTTGCAGAACGGTGTGGCCGACCTGGCGCCCGGACCAGTACC  49

seq1  --AACGAC-AGGTGCTTCGGCT-CCTTTTTTCTTC-TTCCTTT--CCTCT  90
        | |||| |||||| |||  | ||| |||||| | |||||||  |||||
seq2  CAACCGACAAGGTGC-TCGCTTCCCTATTTTCTACTTTCCTTTTCCCTCT  98

seq1  TCCCCC-ACCCTCCT-CACCC-TGAAGT-AAGATG-AGCGT-GATG-CTG  133
      |||||| ||  |||| ||||| |||||| |||||| ||||| |||| |||
seq2  TCCCCCAACGTTCCTCCACCCTTGAAGTAAAGATGAAGCGTGGATGCCTG  148

seq1  TGGC--GCTGGGAACA--GAACAATTCC---ACCATGAAGCTGGTAAGGG  176
      ||||   |||||||||   ||||||| |    ||||||||||||||||||
seq2  TGGCCGCCTGGGAACAAGAAACAATTTCCTACCCATGAAGCTGGTAAGGG  198

seq1  CA-CACTGCAGACTCA-CAAGC-TCTACTGTGGTCTCTTCCCTGA-CAT-  221
      || ||||||||||||| ||||| |||||||||||||||| ||||| ||| 
seq2  CACCACTGCAGACTCACCAAGCTTCTACTGTGGTCTCTT-CCTGACCATC  247

seq1  CCTGAATTGTTGCTGGAGTGGAAAA-CCCCCGATCCACAGTTGGTATTTC  270
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTGAATTGTTGCTGGAGTGGAAAACCCCCCGATCCACAGTTGGTATTTC  297

seq1  -TTTTTATCTTGAAGGGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTAT  319
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATCTTGAAGGGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTAT  347

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCGCGCGC  369
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCGCGCGC  397

seq1  GCGCGCGCGCTCGCACAAG-AAGCAGAGCTGAACTGACTTATGTCCCCAT  418
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GCGCGCGCGCTCGCACAAGAAAGCAGAGCTGAACTGACTTATGTCCCCAT  447

seq1  CCCTTCCACCTATTAATTCCTGAGGCTTCTGCAGTTGCACCTCAAGGGTC  468
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCACCTATTAATTCCTGAGGCTTCTGCAGTTGCACCTCAAGGGTC  497

seq1  ATTTCCTTGGTGCAGAGCTGCGTTCTCCAGACAGGACTTGAGGCAGCGTG  518
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTGGTGCAGAGCTGCGTTCTCCAGACAGGACTTGAGGCAGCGTG  547

seq1  GTCTGCCTGCTGGATCCCTGCCCAGCATTGTGTTGTAGTCTCTTCGGATG  568
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTGCTGGATCCCTGCCCAGCATTGTGTTGTAGTCTCTTCGGATG  597

seq1  CACATGGGTGCTGCTCACTTGTGGTCTAGCTCATTTGGGGTTGGAAGGTG  618
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGTGCTGCTCACTTGTGGTCTAGCTCATTTGGGGTTGGAAGGTG  647

seq1  GGAACGTGCAGCCCCTCTTCTTATTTTTCCTCTCACAGTGTGGTAGCTCC  668
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGTGCAGCCCCTCTTCTTATTTTTCCTCTCACAGTGTGGTAGCTCC  697

seq1  ATTTTAAGCTTGCAAGAAGCCTGCAGGCTTCAGACGCCTTTTCCCTCCCT  718
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGCTTGCAAGAAGCCTGCAGGCTTCAGACGCCTTTTCCCTCCCT  747

seq1  CCATTTCCAAATAGTAACTGCTGCTCCCTCCCAGGAAAGGTGAGACCAGC  768
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCAAATAGTAACTGCTGCTCCCTCCCAGGAAAGGTGAGACCAGC  797

seq1  AGTGCTCTCCTTGCTGCTCCAGGTGGGCTGATTTTTTTTTTTTTCCCATC  818
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCTCCTTGCTGCTCCAGGTGGGCTGATTTTTTTTTTTTTCCCATC  847

seq1  TCAAGCAGGAAATGGGATCCAAAGGTTTGTCTGGCTTTGGCTTAAGATGT  868
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAGGAAATGGGATCCAAAGGTTTGTCTGGCTTTGGCTTAAGATGT  897

seq1  GGTGGAGTTTTTGTTTGTTTGTTTGTTTGTTTGCTCTGTTTTGTTTTATC  918
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGTTTTTGTTTGTTTGTTTGTTTGTTTGCTCTGTTTTGTTTTATC  947

seq1  TGATGGTTTCGGCTGGCAGGGATTGTAAACTTTCCCCCAGAAGTCAGAGA  968
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTTTCGGCTGGCAGGGATTGTAAACTTTCCCCCAGAAGTCAGAGA  997

seq1  GTGCTGTGGTCTGGTCAGTGCCTTCAGCATCCAGTGGATCAGGGTAAAAT  1018
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGGTCTGGTCAGTGCCTTCAGCATCCAGTGGATCAGGGTAAAAT  1047

seq1  AAACCCATCGCATTTGGGGTTGGGGGGAAAGGTTCCCACTTTGCAGATCC  1068
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCATCGCATTTGGGGTTGGGGGGAAAGGTTCCCACTTTGCAGATCC  1097

seq1  CATTCTGAGCTTGATATATAAGAGCTCAATAGAAAATAGGATGGATAAAC  1118
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAGCTTGATATATAAGAGCTCAATAGAAAATAGGATGGATAAAC  1147

seq1  TGGAATTC  1126
      ||||||||
seq2  TGGAATTC  1155

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Alignment Information