BAC Information

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BAC

Clone NameB6Ng01-198O01
Chromosome7 (Build37)
Map Location 86,254,169 - 86,430,724
singlet/doubletdoublet
Overlap geneAcan, Hapln3, Mfge8, Abhd2
Upstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20
Downstream geneRlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198O01.bB6Ng01-198O01.g
ACCGA020359GA020360
length1,1711,159
definitionB6Ng01-198O01.b B6Ng01-198O01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,254,169 - 86,255,319)(86,429,566 - 86,430,724)
sequence
gaattccacgttccttggaggcattgccaagggtacagctgacagatgtg
catagggcttctgtagtaaggttgggacactcatctttcctgcagcctcc
tgccttctacgtataccccaagaagtcaggtgcatgggggtctcagccgg
gcaggaatagagtacaaggattttccctccaaaatgccacatgggagaaa
gggctggaaaatccacacagacaacagctctggaacttaccttggaaaga
gagcctgtgctccaaaagggactgggtgcaacaggggccaggctgtgcct
tatagaccaggaaagtggttccagagccacccacctgagccctaggccta
agtgcccagcaggacaaggctctgtcacaacctggttgcaatgcctcatg
ggatcttgtgtcttgcttgtctcaggtatcattgccttttctagccattt
tggaagtctgtctatgttcactacctctactggcatggtcctcccaacat
gcccagctccttccctccctgaccctccctgcccagctcagccctcaggt
tctgaggcgtcacaagccctggccaacaggcctgggatggcatctctgtc
tcagtgctgagcatcctctaaggcctccttggcctctttccagattttta
tcctggcccttgaggaaggcactggtatgagggggaccctcttcctcctg
gcctctactctgcctctttcttctccaacagccaaccttctgctccccct
ctttccctttctagcctttccaagcacccaccccatagcccaaagaagat
cccttcccctcggaaactccctatccttcctgggacagccagattagtga
aaccacctagtttggaagctgccactcatcctgagatatctgtgggccac
tccctgagccccagggtcctccccctccatatggaaggccgcaggcaaag
aaggaaaaaagatgggatttagagttccctctggtccagtgctctctcta
ctgaacagatgttttaactactggaagctcacagaaggagaagggagtcc
ttgacaggaggcttcttttcagtcctggagaatggcaaaccccttctaca
tggcttaccccaccaggtccaccaccacgccttaccactgggagccggtt
agcctaacatctactcctctg
gaattcaaactgaggaagcagagggaagagggagatggcgtggcagttgg
tgatcctcgagaagagatgggacagaagaaagaaatgaggtgtgcgcaga
caccaaggtcacagctgagcagtgtgaggcagacagaaccagagggatag
gtttggagcggcgaccgtgagtcactgtggaatgatgcttccacgatgtt
tacaaggggaattccaggagtcagcctggaagccggtgccacacggatgc
tgtcatggcagtgggcaatgagctgtgtatatcctactgttcatgcgagg
ggctgacgtaaggccggaagtgtggggaacatttacttggccactggaac
cagaactcttggctctgtggggagtatcgtcactcactactgaagccaca
gtgacagtccttgatggcttctaactcatcttgtaggaacttctgtagcg
gaggcctccctgattctaagactctagatctaagattctagattcaccgc
cgtggcctaccctcacatgtaaatgccagtcataactaggaaatctgcta
gtgccatctcttcataagactgacagtcacctttcattactctctgcgtt
ggggattccagccaacgtctttcaaatgaactcttcctatttgacattct
acacagatgggaacccatgcttttgagcacacagtggttatcttataacc
agatggagcctactggaaaggctcaattaggtgaacgcacaaccccggtg
attcttttaatcgtattttcttgccagattactccatcaggctgagaggt
agccagcttgccttgctgctgtgcactgagagaaagctggacttgcggca
gcttttcgggtgttctaaagactaccgtgaagatttggcaaaccatttgt
ccatccatgaaagttttccattttctgtcattcagagaagctattgtttc
catggctctattttttttccctagtctcttgccctcttgactaaagatat
ctcagtaggccaaaaagtttagaaatcttacttcagacatgttctgctcg
aaaattagagataagccacagtgggtaactagcgccggctgtatgtatga
gatctggtacctcgtcatgaggcgagtactgacctagctgtcagaatctt
tataaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86254169_86255319
seq2: B6Ng01-198O01.b_44_1214

seq1  GAATTCCACGTTCCTTGGAGGCATTGCCAAGGGTACAGCTGACAGATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGTTCCTTGGAGGCATTGCCAAGGGTACAGCTGACAGATGTG  50

seq1  CATAGGGCTTCTGTAGTAAGGTTGGGACACTCATCTTTCCTGCAGCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGCTTCTGTAGTAAGGTTGGGACACTCATCTTTCCTGCAGCCTCC  100

seq1  TGCCTTCTACGTATACCCCAAGAAGTCAGGTGCATGGGGGTCTCAGCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTACGTATACCCCAAGAAGTCAGGTGCATGGGGGTCTCAGCCGG  150

seq1  GCAGGAATAGAGTACAAGGATTTTCCCTCCAAAATGCCACATGGGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATAGAGTACAAGGATTTTCCCTCCAAAATGCCACATGGGAGAAA  200

seq1  GGGCTGGAAAATCCACACAGACAACAGCTCTGGAACTTACCTTGGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGAAAATCCACACAGACAACAGCTCTGGAACTTACCTTGGAAAGA  250

seq1  GAGCCTGTGCTCCAAAAGGGACTGGGTGCAACAGGGGCCAGGCTGTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTGCTCCAAAAGGGACTGGGTGCAACAGGGGCCAGGCTGTGCCT  300

seq1  TATAGACCAGGAAAGTGGTTCCAGAGCCACCCACCTGAGCCCTAGGCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACCAGGAAAGTGGTTCCAGAGCCACCCACCTGAGCCCTAGGCCTA  350

seq1  AGTGCCCAGCAGGACAAGGCTCTGTCACAACCTGGTTGCAATGCCTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCAGCAGGACAAGGCTCTGTCACAACCTGGTTGCAATGCCTCATG  400

seq1  GGATCTTGTGTCTTGCTTGTCTCAGGTATCATTGCCTTTTCTAGCCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTGTGTCTTGCTTGTCTCAGGTATCATTGCCTTTTCTAGCCATTT  450

seq1  TGGAAGTCTGTCTATGTTCACTACCTCTACTGGCATGGTCCTCCCAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCTGTCTATGTTCACTACCTCTACTGGCATGGTCCTCCCAACAT  500

seq1  GCCCAGCTCCTTCCCTCCCTGACCCTCCCTGCCCAGCTCAGCCCTCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCTCCTTCCCTCCCTGACCCTCCCTGCCCAGCTCAGCCCTCAGGT  550

seq1  TCTGAGGCGTCACAAGCCCTGGCCAACAGGCCTGGGATGGCATCTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGCGTCACAAGCCCTGGCCAACAGGCCTGGGATGGCATCTCTGTC  600

seq1  TCAGTGCTGAGCATCCTCTAAGGCCTCCTTGGCCTCTTTCCAGATTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTGAGCATCCTCTAAGGCCTCCTTGGCCTCTTTCCAGATTTTTA  650

seq1  TCCTGGCCCTTGAGGAAGGCACTGGTATGAGGGGGACCCTCTTCCTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCCTTGAGGAAGGCACTGGTATGAGGGGGACCCTCTTCCTCCTG  700

seq1  GCCTCTACTCTGCCTCTTTCTTCTCCAACAGCCAACCTTCTGCTCCCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTACTCTGCCTCTTTCTTCTCCAACAGCCAACCTTCTGCTCCCCCT  750

seq1  CTTTCCCTTTCTAGCCTTTCCAAGCACCCACCCCATAGCCCAAAGAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTTTCTAGCCTTTCCAAGCACCCACCCCATAGCCCAAAGAAGAT  800

seq1  CCCTTCCCCTCGGAAACTCCCTATCCTTCCTGGGACAGCCAGATTAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCCTCGGAAACTCCCTATCCTTCCTGGGACAGCCAGATTAGTGA  850

seq1  AACCACCTAGTTTGGAAGCTGCCACTCATCCTGAGATATCTGT-GGCCAC  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACCACCTAGTTTGGAAGCTGCCACTCATCCTGAGATATCTGTGGGCCAC  900

seq1  TCCCTGAGCCCCAGGGTCCTCCCCCTCCATATGG-AGGCCGCAGGCAAAG  948
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCCTGAGCCCCAGGGTCCTCCCCCTCCATATGGAAGGCCGCAGGCAAAG  950

seq1  AAGGAAAAAAGAT-GGATTTAGAGTTCCCTCT-GTCCAGTGCTCTCTCTA  996
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  AAGGAAAAAAGATGGGATTTAGAGTTCCCTCTGGTCCAGTGCTCTCTCTA  1000

seq1  CTG-ACAGATG-TTTAACTACTGG-AGCTCACAG-AGGAG-AGGGAGTCC  1041
      ||| ||||||| |||||||||||| ||||||||| ||||| |||||||||
seq2  CTGAACAGATGTTTTAACTACTGGAAGCTCACAGAAGGAGAAGGGAGTCC  1050

seq1  -TGACAGGAGGCTTCTTTCCAGTCCT-GAG-ATGGCAA--CCCTTCCACC  1086
       ||||||||||||||||| ||||||| ||| |||||||  |||||| || 
seq2  TTGACAGGAGGCTTCTTTTCAGTCCTGGAGAATGGCAAACCCCTTCTACA  1100

seq1  AGGGCTACCCAAC--AGTCAACCA-CACGC--TACCACT-GGAGGCGGTT  1130
       ||  ||||| ||   ||| |||| |||||  ||||||| |||| |||||
seq2  TGGCTTACCCCACCAGGTCCACCACCACGCCTTACCACTGGGAGCCGGTT  1150

seq1  AGCTTACCATCTACTCCTCTG  1151
      ||| || ||||||||||||||
seq2  AGCCTAACATCTACTCCTCTG  1171

seq1: chr7_86429566_86430724
seq2: B6Ng01-198O01.g_63_1221 (reverse)

seq1  TGCCTTATAAAG--TCTG-CAGCTTGTGTCAGCTCCTCCGCCCCCCATGG  47
      ||||||||||||  |||| ||||| | |||||    | | | || |||| 
seq2  TGCCTTATAAAGATTCTGACAGCTAG-GTCAG----TACTCGCCTCATGA  45

seq1  CGGGGTTTCCAGATCTCTTCCCTTCCAGGCGGGCGCTTG-TCCCCACTGT  96
      || || | ||||||||| | | | |   || |||||| | | ||||||||
seq2  CGAGG-TACCAGATCTCATACATAC--AGCCGGCGCTAGTTACCCACTGT  92

seq1  GGCTTATCTCT-ATTTTCGAGGCAG-ACATGTCTGAAGT-AGATTTCTTA  143
      ||||||||||| |||||||| |||| ||||||||||||| |||||||| |
seq2  GGCTTATCTCTAATTTTCGA-GCAGAACATGTCTGAAGTAAGATTTCTAA  141

seq1  ACTTTTTGGCCTACTGAGATATTCTTTAGTCAAGAGGGCAAGAGACTAGG  193
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTTTTTGGCCTACTGAGATA-TCTTTAGTCAAGAGGGCAAGAGACTAGG  190

seq1  GAAAAAAAATAGAGCCATGG--ACAATAGCTTCTCTGAATGACAGAAAAT  241
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GAAAAAAAATAGAGCCATGGAAACAATAGCTTCTCTGAATGACAGAAAAT  240

seq1  GGAAAACCTTCATGGATGGACAAATGGTTTGCCAAATCTTCACGGTAGTC  291
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTTTCATGGATGGACAAATGGTTTGCCAAATCTTCACGGTAGTC  290

seq1  TTTAGAACA-CCGAAAAGCTGCCGCAAGTCCAGCTTTCTCTCAGTGCACA  340
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAACACCCGAAAAGCTGCCGCAAGTCCAGCTTTCTCTCAGTGCACA  340

seq1  GCAGCAAGGCAAGCTGGCTACCTCTCAGCCTGATGGAGTAATCTGGCAAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAGGCAAGCTGGCTACCTCTCAGCCTGATGGAGTAATCTGGCAAG  390

seq1  AAAATACGATTAAAAGAATCACCGGGGTTGTGCGTTCACCTAATTGAGCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACGATTAAAAGAATCACCGGGGTTGTGCGTTCACCTAATTGAGCC  440

seq1  TTTCCAGTAGGCTCCATCTGGTTATAAGATAACCACTGTGTGCTCAAAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTAGGCTCCATCTGGTTATAAGATAACCACTGTGTGCTCAAAAG  490

seq1  CATGGGTTCCCATCTGTGTAGAATGTCAAATAGGAAGAGTTCATTTGAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTTCCCATCTGTGTAGAATGTCAAATAGGAAGAGTTCATTTGAAA  540

seq1  GACGTTGGCTGGAATCCCCAACGCAGAGAGTAATGAAAGGTGACTGTCAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTGGCTGGAATCCCCAACGCAGAGAGTAATGAAAGGTGACTGTCAG  590

seq1  TCTTATGAAGAGATGGCACTAGCAGATTTCCTAGTTATGACTGGCATTTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGAAGAGATGGCACTAGCAGATTTCCTAGTTATGACTGGCATTTA  640

seq1  CATGTGAGGGTAGGCCACGGCGGTGAATCTAGAATCTTAGATCTAGAGTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAGGGTAGGCCACGGCGGTGAATCTAGAATCTTAGATCTAGAGTC  690

seq1  TTAGAATCAGGGAGGCCTCCGCTACAGAAGTTCCTACAAGATGAGTTAGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATCAGGGAGGCCTCCGCTACAGAAGTTCCTACAAGATGAGTTAGA  740

seq1  AGCCATCAAGGACTGTCACTGTGGCTTCAGTAGTGAGTGACGATACTCCC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCAAGGACTGTCACTGTGGCTTCAGTAGTGAGTGACGATACTCCC  790

seq1  CACAGAGCCAAGAGTTCTGGTTCCAGTGGCCAAGTAAATGTTCCCCACAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGCCAAGAGTTCTGGTTCCAGTGGCCAAGTAAATGTTCCCCACAC  840

seq1  TTCCGGCCTTACGTCAGCCCCTCGCATGAACAGTAGGATATACACAGCTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGCCTTACGTCAGCCCCTCGCATGAACAGTAGGATATACACAGCTC  890

seq1  ATTGCCCACTGCCATGACAGCATCCGTGTGGCACCGGCTTCCAGGCTGAC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCACTGCCATGACAGCATCCGTGTGGCACCGGCTTCCAGGCTGAC  940

seq1  TCCTGGAATTCCCCTTGTAAACATCGTGGAAGCATCATTCCACAGTGACT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAATTCCCCTTGTAAACATCGTGGAAGCATCATTCCACAGTGACT  990

seq1  CACGGTCGCCGCTCCAAACCTATCCCTCTGGTTCTGTCTGCCTCACACTG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTCGCCGCTCCAAACCTATCCCTCTGGTTCTGTCTGCCTCACACTG  1040

seq1  CTCAGCTGTGACCTTGGTGTCTGCGCACACCTCATTTCTTTCTTCTGTCC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGTGACCTTGGTGTCTGCGCACACCTCATTTCTTTCTTCTGTCC  1090

seq1  CATCTCTTCTCGAGGATCACCAACTGCCACGCCATCTCCCTCTTCCCTCT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTCTCGAGGATCACCAACTGCCACGCCATCTCCCTCTTCCCTCT  1140

seq1  GCTTCCTCAGTTTGAATTC  1159
      |||||||||||||||||||
seq2  GCTTCCTCAGTTTGAATTC  1159