BAC Information

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BAC

Clone NameB6Ng01-198O07
Chromosome7 (Build37)
Map Location 31,341,423 - 31,508,330
singlet/doubletdoublet
Overlap gene1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a
Upstream gene4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6
Downstream geneTmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198O07.bB6Ng01-198O07.g
ACCGA020371GA020372
length1,078970
definitionB6Ng01-198O07.b B6Ng01-198O07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,507,254 - 31,508,330)(31,341,423 - 31,342,383)
sequence
gaattctgtgtgaatgacattactaggaaattgacagaagagggccattt
gaatctgagatgaaatggtctgtcaggatagcaagagagtcacctctatc
tgaaagcctcagaagcagaagatgaagctaagagtggtgagaaaaagtgt
cccagcaaccaccgaggcagggtgggagtgcctgacactctagctggact
gacaacaacggtgcttgtcgctgggtaggaggaagtgggagctcacccat
tcctggccgtagctgtcttgaagatcttgtagatggtggtcctcccattg
tggccgcagtcctacacacaacagagggaaccagccctcctgcgccatgg
ccgtgaagtagtcagcaaagccggcaaatgactgaatggcacctggggaa
ggtgagacacaggagtgtagggacagaggtggagacagatacacaaaacc
aagcacacacagagcacagggacacaggacagaaatacaagaaagacaca
gacaaagtgcatgcagacaagaacagagagaatcccagaagaccaagaca
ctgaccaggaaacagcaaggtcagagttttacactcagactagagttaca
catggatactcagggacatgcagccgccaagccccagagccccacccagg
aggaccacagcaggagaggaccccaatcttggttcacagggcttaccaat
ctggaaataggaataagcagccaggggttcgttgaccaaccggtcacgct
tagggttccgtgggcgcaggtgcatgatgtcgctctcagccttctcgtac
gccagggacacagatggaaactggccaggagcagaaggaagtagggctga
gggtagcctgggccactgactccttcatcctgaagccaaccttgcccccc
cacacccccctacctctaggtaaacacaagagggaggccctgcagtggcc
acacacccacactggcccaacaacctgggccgcttgacccatgtgtgcag
gctgtatgtctggtcacattgtgtcctagtgtccatcttcctaccaatgt
tcgccttcgttttgtggttgttttgttt
gaattccatctctatctgtcagcccaggggcagagggtggtcaagatgct
ctctttacgcagttgtctagggcaggtgtcatgtctacttttatcttgag
agccccaagaatcaaagtcatgtatctgtcccaggaatccatgtctaccc
tttcaggccagatgattttcaaacctgttaccctccgcccagcccgtaag
gtccacatgtgctcaccaaggccccatctggtagccacatctgtttgcac
ttaagatccctgttccctaggaagccatatctatgtggcctagggacctc
tgtccataatcctaagagcaaatagctatctgtcctacccgattctctat
tcattgaggggggcccaggcattaaagctatctaccactcatgggggagt
tgttgacttatccacccactcttcaatctggcctcctgattgaactcatc
ctacctctccatcctcgggcagaggaggcagcggtgagccgggtgagcgc
tcgcgctctcgcactgtggggctgttgcgcatccaggcgcggcagatggg
gtacagtggtgtgttctcactgaactgggccaagtccacactccggtcaa
atagcttgatcacatacgtatctggggtggtaaggtaggcgataagtgtg
tagttcctggctccacacccaccctctcagtcccctgcctactcactgga
tctctgaggacccccctcagcgagcccatcgtccatctccctcctcttct
ttcctccgctggtgggggaagcgggcagatggcctgtgtggtttaaggtg
agttgtcaggcccggagctggggactgggaaacctttttagtgagctggg
gtcccagccacctttaccttttgcctgtggcaagcatgggaacaatccct
tgcagggagaagacatggtgtcaggaggctttaataacagctgctcaacc
gctgccccctaaggtggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_31507254_31508330
seq2: B6Ng01-198O07.b_46_1123 (reverse)

seq1  AAACAAAACAA-CACAAACGAAAGGCCGACATTGGTAGGGAGATGGACAC  49
      ||||||||||| ||||||   |||||  ||||||||||| ||||||||||
seq2  AAACAAAACAACCACAAAACGAAGGCGAACATTGGTAGGAAGATGGACAC  50

seq1  TAGGACAC-ATGTGACCCAGACATACAGCCTGCACACATGGGTCAAGCGG  98
      |||||||| |||||| ||||||||||||||||||||||||||||||||||
seq2  TAGGACACAATGTGA-CCAGACATACAGCCTGCACACATGGGTCAAGCGG  99

seq1  CCCAGGTTGTTGGGCCAGTGTGGGTGTGTGGCCACTGCAGGGCCTCCCTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTTGTTGGGCCAGTGTGGGTGTGTGGCCACTGCAGGGCCTCCCTC  149

seq1  TTGTGTTTACCTAGAGGTAGGGGGGTGTGGGGGGGCAAGGTTGGCTTCAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTACCTAGAGGTAGGGGGGTGTGGGGGGGCAAGGTTGGCTTCAG  199

seq1  GATGAAGGAGTCAGTGGCCCAGGCTACCCTCAGCCCTACTTCCTTCTGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGAGTCAGTGGCCCAGGCTACCCTCAGCCCTACTTCCTTCTGCT  249

seq1  CCTGGCCAGTTTCCATCTGTGTCCCTGGCGTACGAGAAGGCTGAGAGCGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCAGTTTCCATCTGTGTCCCTGGCGTACGAGAAGGCTGAGAGCGA  299

seq1  CATCATGCACCTGCGCCCACGGAACCCTAAGCGTGACCGGTTGGTCAACG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGCACCTGCGCCCACGGAACCCTAAGCGTGACCGGTTGGTCAACG  349

seq1  AACCCCTGGCTGCTTATTCCTATTTCCAGATTGGTAAGCCCTGTGAACCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTGGCTGCTTATTCCTATTTCCAGATTGGTAAGCCCTGTGAACCA  399

seq1  AGATTGGGGTCCTCTCCTGCTGTGGTCCTCCTGGGTGGGGCTCTGGGGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGGGTCCTCTCCTGCTGTGGTCCTCCTGGGTGGGGCTCTGGGGCT  449

seq1  TGGCGGCTGCATGTCCCTGAGTATCCATGTGTAACTCTAGTCTGAGTGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGCTGCATGTCCCTGAGTATCCATGTGTAACTCTAGTCTGAGTGTA  499

seq1  AAACTCTGACCTTGCTGTTTCCTGGTCAGTGTCTTGGTCTTCTGGGATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTGACCTTGCTGTTTCCTGGTCAGTGTCTTGGTCTTCTGGGATTC  549

seq1  TCTCTGTTCTTGTCTGCATGCACTTTGTCTGTGTCTTTCTTGTATTTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTCTTGTCTGCATGCACTTTGTCTGTGTCTTTCTTGTATTTCTG  599

seq1  TCCTGTGTCCCTGTGCTCTGTGTGTGCTTGGTTTTGTGTATCTGTCTCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTCCCTGTGCTCTGTGTGTGCTTGGTTTTGTGTATCTGTCTCCA  649

seq1  CCTCTGTCCCTACACTCCTGTGTCTCACCTTCCCCAGGTGCCATTCAGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCCCTACACTCCTGTGTCTCACCTTCCCCAGGTGCCATTCAGTC  699

seq1  ATTTGCCGGCTTTGCTGACTACTTCACGGCCATGGCGCAGGAGGGCTGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCGGCTTTGCTGACTACTTCACGGCCATGGCGCAGGAGGGCTGGT  749

seq1  TCCCTCTGTTGTGTGTAGGACTGCGGCCACAATGGGAGGACCACCATCTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGTTGTGTGTAGGACTGCGGCCACAATGGGAGGACCACCATCTA  799

seq1  CAAGATCTTCAAGACAGCTACGGCCAGGAATGGGTGAGCTCCCACTTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTTCAAGACAGCTACGGCCAGGAATGGGTGAGCTCCCACTTCCT  849

seq1  CCTACCCAGCGACAAGCACCGTTGTTGTCAGTCCAGCTAGAGTGTCAGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCAGCGACAAGCACCGTTGTTGTCAGTCCAGCTAGAGTGTCAGGC  899

seq1  ACTCCCACCCTGCCTCGGTGGTTGCTGGGACACTTTTTCTCACCACTCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCACCCTGCCTCGGTGGTTGCTGGGACACTTTTTCTCACCACTCTT  949

seq1  AGCTTCATCTTCTGCTTCTGAGGCTTTCAGATAGAGGTGACTCTCTTGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCATCTTCTGCTTCTGAGGCTTTCAGATAGAGGTGACTCTCTTGCT  999

seq1  ATCCTGACAGACCATTTCATCTCAGATTCAAATGGCCCTCTTCTGTCAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACAGACCATTTCATCTCAGATTCAAATGGCCCTCTTCTGTCAAT  1049

seq1  TTCCTAGTAATGTCATTCACACAGAATTC  1077
      |||||||||||||||||||||||||||||
seq2  TTCCTAGTAATGTCATTCACACAGAATTC  1078

seq1: chr7_31341423_31342383
seq2: B6Ng01-198O07.g_65_1034

seq1  GAATTCCATCTCTATCTGTCAGCCCAGGGGCAGAGGGTGGTCAAGATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTCTATCTGTCAGCCCAGGGGCAGAGGGTGGTCAAGATGCT  50

seq1  CTCTTTACGCAGTTGTCTAGGGCAGGTGTCATGTCTACTTTTATCTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTACGCAGTTGTCTAGGGCAGGTGTCATGTCTACTTTTATCTTGAG  100

seq1  AGCCCCAAGAATCAAAGTCATGTATCTGTCCCAGGAATCCATGTCTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAAGAATCAAAGTCATGTATCTGTCCCAGGAATCCATGTCTACCC  150

seq1  TTTCAGGCCAGATGATTTTCAAACCTGTTACCCTCCGCCCAGCCCGTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCCAGATGATTTTCAAACCTGTTACCCTCCGCCCAGCCCGTAAG  200

seq1  GTCCACATGTGCTCACCAAGGCCCCATCTGGTAGCCACATCTGTTTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACATGTGCTCACCAAGGCCCCATCTGGTAGCCACATCTGTTTGCAC  250

seq1  TTAAGATCCCTGTTCCCTAGGAAGCCATATCTATGTGGCCTAGGGACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATCCCTGTTCCCTAGGAAGCCATATCTATGTGGCCTAGGGACCTC  300

seq1  TGTCCATAATCCTAAGAGCAAATAGCTATCTGTCCTACCCGATTCTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATAATCCTAAGAGCAAATAGCTATCTGTCCTACCCGATTCTCTAT  350

seq1  TCATTGAGGGGGGCCCAGGCATTAAAGCTATCTACCACTCATGGGGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAGGGGGGCCCAGGCATTAAAGCTATCTACCACTCATGGGGGAGT  400

seq1  TGTTGACTTATCCACCCACTCTTCAATCTGGCCTCCTGATTGAACTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTTATCCACCCACTCTTCAATCTGGCCTCCTGATTGAACTCATC  450

seq1  CTACCTCTCCATCCTCGGGCAGAGGAGGCAGCGGTGAGCCGGGTGAGCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTCCATCCTCGGGCAGAGGAGGCAGCGGTGAGCCGGGTGAGCGC  500

seq1  TCGCGCTCTCGCACTGTGGGGCTGTTGCGCATCCAGGCGCGGCAGATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCGCTCTCGCACTGTGGGGCTGTTGCGCATCCAGGCGCGGCAGATGGG  550

seq1  GTACAGTGGTGTGTTCTCACTGAACTGGGCCAAGTCCACACTCCGGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTGGTGTGTTCTCACTGAACTGGGCCAAGTCCACACTCCGGTCAA  600

seq1  ATAGCTTGATCACATACGTATCTGGGGTGGTAAGGTAGGCGATAAGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTGATCACATACGTATCTGGGGTGGTAAGGTAGGCGATAAGTGTG  650

seq1  TAGTTCCTGGCTCCACACCCACCCTCTCAGTCCCCTGCCTACTCACTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTGGCTCCACACCCACCCTCTCAGTCCCCTGCCTACTCACTGGA  700

seq1  TCTCTGAGGACCCCCCTCAGCGAGCCCATCGTCCATCTCCCTCCTCTTC-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTCTGAGGACCCCCCTCAGCGAGCCCATCGTCCATCTCCCTCCTCTTCT  750

seq1  TTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGTGTGG-TTAAGGTG  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCCTCCGCTGGTGGGGGAAGCGGGCAGATGGCCTGTGTGGTTTAAGGTG  800

seq1  AG-TGTCAGGCCCGGAGCTGGGGACTGGGAA--CCTTTTAGTGAGCTGGG  845
      || ||||||||||||||||||||||||||||  | |||||||||||||||
seq2  AGTTGTCAGGCCCGGAGCTGGGGACTGGGAAACCTTTTTAGTGAGCTGGG  850

seq1  GTCCCAGCCACC-TTACCTTTTGCCTGTGGC-AGCAATGGAACAATCCC-  892
      |||||||||||| |||||||||||||||||| ||||  ||||||||||| 
seq2  GTCCCAGCCACCTTTACCTTTTGCCTGTGGCAAGCATGGGAACAATCCCT  900

seq1  TGCAGGGAG-AGACATGGTGTCAGGAGGCTTTAATAAACAGCTGCTCAA-  940
      ||||||||| ||||||||||||||||||||||||| ||||||||||||| 
seq2  TGCAGGGAGAAGACATGGTGTCAGGAGGCTTTAAT-AACAGCTGCTCAAC  949

seq1  CGCTGCCCCCCAAGGTGGAAG  961
      |||||||||| ||||||||||
seq2  CGCTGCCCCCTAAGGTGGAAG  970