BAC Information

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BAC

Clone NameB6Ng01-199A12
Chromosome7 (Build37)
Map Location 76,661,026 - 76,799,314
singlet/doubletdoublet
Overlap geneEG665410
Upstream geneEG384639, Arrdc4, LOC384741
Downstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199A12.bB6Ng01-199A12.g
ACCGA020471GA020472
length1,0261,159
definitionB6Ng01-199A12.b B6Ng01-199A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,661,026 - 76,661,960)(76,798,154 - 76,799,314)
sequence
gaattccataggactcttttggctagtgattcaacaagttgttactcctt
tgttatgctggaggttgtacttggtgatgtaatatgcctaaatgaggtat
tggctcccctattatacgatgactccatttacattcattgtatatgtgtg
gatagtttctacagcagtaggtttccatattgtttttccaatgctttgta
tggttagttgtccccttttcaacgatttctcccatatcttacctcattta
attaccctaataaagattttctttatctttcccaaacactatattgcatt
tccccttccttggaagatcttctttctccagtttcttactgaatatttaa
cattggtatttattcacattgtagcatacatattgaaatcttaaaagcta
acattcacatataagagaatcatataacattcgccttttgggatttttaa
ggttagctttaaggtaacctctttaaggttatcttactcaggaaggtttt
attctagctctatctatctacttatattttaatgattggataatattcca
ttctataaatacacattttttttttactcattcacaaggctatttcttgt
tgaggtttggtcttttgttatgtgctgtaatgctagatactgtctctctt
tttttttttcatagtagccttttttttttttttttttttttttatagata
ctgtctcttaagagctggttgccctcaggggcaagaaaatctgcacatac
acaaagtaaagttatataatcttgttccttaatttaaaactatttggttg
aatgaagatgcccacacactatagctggacagaagagagacagcctggaa
ttttttggttcccaggcttggggctgagtttaggagattatggggagaag
aaaaagaaggtggagagatgacaagaggccaatggggttagttaagctat
gaaaacatgggcattgcgggctgttcagttgtagtttagagagctcaaat
ggaacacagctgttacctatcagagt

gaattccttaagtgtgagagggagctctctatggagcaggtatatattga
acaggccttttaaccatcacaaccgattaatgcaactaattactgggcta
gtatatatagtcaattaacatttctgtggaaaacactccaaatatttaaa
aatgtataatttcagccagcaattcacatttcaaaaattcctctgagtaa
gacaacccaatgtaagacttcaccacagtaatatttattatgacagtgat
gataatgttataatacattctatgtatagcaaatatggtattataatata
gctaataatgtaatacatgctatgtacaacatatactataatatagctaa
tcatgtaatataatatgtataatatatactatataataatatacctaata
ctagttttcaccctgtatcagaggcagtttatctttcttttatttaataa
aataaattaataaatctgggatccagacagatatagaacatttaggtaaa
taccacttgaactgttaaagatgtcagtttacccaggctgccataactga
atgccccacagagatagctaaataaaaagatgtatttctaagtccaggaa
atggggaatctaagaccaagaaactgaaaagaacatttcatcatgaggac
cctgtttgccatttgttatcaaacaatgtgctttgcatagcacatactgc
tgaagaaatgcaggagaggatgaagggaaagggaactatgaagttctttg
gatttttttattttttataaggacaatgatccttttaggccagggtccca
ttcttgtaacctaactgaacattaatcattataccttcttatagacctta
tcatcaaatggaggtgaactattgtcaagggtttcaccctatctatgact
ttttggaaatttagacccccccagtctgtaacataggatcttttatgtta
gtgaaacttttattaggagacacttctaaatattgtggcattttactgac
tctcaaataagaattatatgactagatgaaagtaattcacattgataggc
caaatggggtgttcctcacattccttttctaaagcagtcgttaagacttg
acgttacccttaaccagctctgattgaagataggccagtatggcttattt
tcagtatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76661026_76661960
seq2: B6Ng01-199A12.b_131_1071

seq1  GCCTAAATGAGGTATTGGCTCCCCTATTATACGATGACTCCATTTACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAATGAGGTATTGGCTCCCCTATTATACGATGACTCCATTTACATT  50

seq1  CATTGTATATGTGTGGATAGTTTCTACAGCAGTAGGTTTCCATATTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTATATGTGTGGATAGTTTCTACAGCAGTAGGTTTCCATATTGTTT  100

seq1  TTCCAATGCTTTGTATGGTTAGTTGTCCCCTTTTCAACGATTTCTCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGCTTTGTATGGTTAGTTGTCCCCTTTTCAACGATTTCTCCCAT  150

seq1  ATCTTACCTCATTTAATTACCCTAATAAAGATTTTCTTTATCTTTCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACCTCATTTAATTACCCTAATAAAGATTTTCTTTATCTTTCCCAA  200

seq1  ACACTATATTGCATTTCCCCTTCCTTGGAAGATCTTCTTTCTCCAGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATATTGCATTTCCCCTTCCTTGGAAGATCTTCTTTCTCCAGTTTC  250

seq1  TTACTGAATATTTAACATTGGTATTTATTCACATTGTAGCATACATATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAATATTTAACATTGGTATTTATTCACATTGTAGCATACATATTG  300

seq1  AAATCTTAAAAGCTAACATTCACATATAAGAGAATCATATAACATTCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAAAAGCTAACATTCACATATAAGAGAATCATATAACATTCGCC  350

seq1  TTTTGGGATTTTTAAGGTTAGCTTTAAGGTAACCTCTTTAAGGTTATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGATTTTTAAGGTTAGCTTTAAGGTAACCTCTTTAAGGTTATCTT  400

seq1  ACTCAGGAAGGTTTTATTCTAGCTCTATCTATCTACTTATATTTTAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAAGGTTTTATTCTAGCTCTATCTATCTACTTATATTTTAATGA  450

seq1  TTGGATAATATTCCATTCTATAAATACACATTTTTTTTTTACTCATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAATATTCCATTCTATAAATACACATTTTTTTTTTACTCATTCAC  500

seq1  AAGGCTATTTCTTGTTGAGGTTTGGTCTTTTGTTATGTGCTGTAATGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTATTTCTTGTTGAGGTTTGGTCTTTTGTTATGTGCTGTAATGCTA  550

seq1  GATACTGTCTCTCTTTTTTTTTTTCATAGTAGCCTTTTTTTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGTCTCTCTTTTTTTTTTTCATAGTAGCCTTTTTTTTTTTTTTTT  600

seq1  TTTTTTTTATAGATACTGTCTCTTAAGAGCTGGTTGCCCTCAGGGGCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATAGATACTGTCTCTTAAGAGCTGGTTGCCCTCAGGGGCAAG  650

seq1  AAAATCTGCACATACACAAAGTAAAGTTATATAATCTTGTTCCTTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGCACATACACAAAGTAAAGTTATATAATCTTGTTCCTTAATTT  700

seq1  AAAACTA-TTGGTTGAATGAAGATGCCCACACACTATAGCTGGACAGAAG  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATTTGGTTGAATGAAGATGCCCACACACTATAGCTGGACAGAAG  750

seq1  AGAGACAGCCTGGAA-TTTTTGGTTCCCAGGCTTGGGGCTGAG-TTAGGA  797
      ||||||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  AGAGACAGCCTGGAATTTTTTGGTTCCCAGGCTTGGGGCTGAGTTTAGGA  800

seq1  GATTATGGGGAGA--GAAAAGAAGGTGGAGAGATGACAAGAGGCC-ATGG  844
      |||||||||||||   ||||||||||||||||||||||||||||| ||||
seq2  GATTATGGGGAGAAGAAAAAGAAGGTGGAGAGATGACAAGAGGCCAATGG  850

seq1  GG-TAGGTAAGCTATGAAAACATGGGCA-TGCGGGCTGGTCAGTTGTAGT  892
      || ||| ||||||||||||||||||||| ||||||||| |||||||||||
seq2  GGTTAGTTAAGCTATGAAAACATGGGCATTGCGGGCTGTTCAGTTGTAGT  900

seq1  TAAGAGAAGCCCAAATGGAACACAGCATGTTACTATTCAGAGT  935
      | |||| ||| ||||||||||||||| ||||||   |||||||
seq2  TTAGAG-AGCTCAAATGGAACACAGC-TGTTACCTATCAGAGT  941


seq1: chr7_76798154_76799314
seq2: B6Ng01-199A12.g_61_1219 (reverse)

seq1  AGATACTGAAAATAAGCATTACTGGCCTATCTTTCAATCAGAGCTGGTTA  50
      |||||||||||||||||  |||||||||||| ||||||||||||||||||
seq2  AGATACTGAAAATAAGCCATACTGGCCTATC-TTCAATCAGAGCTGGTTA  49

seq1  AGGGTAATGTCAAGGTCTTAACGACTGCTTTAGAAAAGGGAATGTGAAGA  100
      ||||||| ||||| ||||||||||||||||||||||| ||||||||| ||
seq2  AGGGTAACGTCAA-GTCTTAACGACTGCTTTAGAAAA-GGAATGTGAGGA  97

seq1  ACACCC--ATTGGGCTATCAATGTGAAATTACTTTCATCTAGTCATATAA  148
      ||||||   |||| ||||||||||| ||||||||||||||||||||||||
seq2  ACACCCCATTTGGCCTATCAATGTG-AATTACTTTCATCTAGTCATATAA  146

seq1  -TCTTATTTGAGAGTCAGTAAAATGCCACAATATTTAGAAAGTGTCTCCT  197
       ||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  TTCTTATTTGAGAGTCAGTAAAATGCCACAATATTTAG-AAGTGTCTCC-  194

seq1  TAATAAAAGTTTCACTAACATAAAAGATCCTATGTTACAGACT-GGGGGG  246
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAATAAAAGTTTCACTAACATAAAAGATCCTATGTTACAGACTGGGGGGG  244

seq1  TCTAAATTTCCAAAAAGTCATAGATAGGGTGAAACCCTTGACAATAGTTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTTCCAAAAAGTCATAGATAGGGTGAAACCCTTGACAATAGTTC  294

seq1  ACCTCCATTTGATGATAAGGTCTATAAGAAGGTATAATGATTAATGTTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATTTGATGATAAGGTCTATAAGAAGGTATAATGATTAATGTTCA  344

seq1  GTTAGGTTACAAGAATGGGACCCTGGCCTAAAAGGATCATTGTCCTTATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTTACAAGAATGGGACCCTGGCCTAAAAGGATCATTGTCCTTATA  394

seq1  AAAAATAAAAAAATCCAAAGAACTTCATAGTTCCCTTTCCCTTCATCCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAAAATCCAAAGAACTTCATAGTTCCCTTTCCCTTCATCCTC  444

seq1  TCCTGCATTTCTTCAGCAGTATGTGCTATGCAAAGCACATTGTTTGATAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATTTCTTCAGCAGTATGTGCTATGCAAAGCACATTGTTTGATAA  494

seq1  CAAATGGCAAACAGGGTCCTCATGATGAAATGTTCTTTTCAGTTTCTTGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGCAAACAGGGTCCTCATGATGAAATGTTCTTTTCAGTTTCTTGG  544

seq1  TCTTAGATTCCCCATTTCCTGGACTTAGAAATACATCTTTTTATTTAGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATTCCCCATTTCCTGGACTTAGAAATACATCTTTTTATTTAGCT  594

seq1  ATCTCTGTGGGGCATTCAGTTATGGCAGCCTGGGTAAACTGACATCTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTGGGGCATTCAGTTATGGCAGCCTGGGTAAACTGACATCTTTA  644

seq1  ACAGTTCAAGTGGTATTTACCTAAATGTTCTATATCTGTCTGGATCCCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCAAGTGGTATTTACCTAAATGTTCTATATCTGTCTGGATCCCAG  694

seq1  ATTTATTAATTTATTTTATTAAATAAAAGAAAGATAAACTGCCTCTGATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAATTTATTTTATTAAATAAAAGAAAGATAAACTGCCTCTGATA  744

seq1  CAGGGTGAAAACTAGTATTAGGTATATTATTATATAGTATATATTATACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGAAAACTAGTATTAGGTATATTATTATATAGTATATATTATACA  794

seq1  TATTATATTACATGATTAGCTATATTATAGTATATGTTGTACATAGCATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATTACATGATTAGCTATATTATAGTATATGTTGTACATAGCATG  844

seq1  TATTACATTATTAGCTATATTATAATACCATATTTGCTATACATAGAATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATTATTAGCTATATTATAATACCATATTTGCTATACATAGAATG  894

seq1  TATTATAACATTATCATCACTGTCATAATAAATATTACTGTGGTGAAGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAACATTATCATCACTGTCATAATAAATATTACTGTGGTGAAGTC  944

seq1  TTACATTGGGTTGTCTTACTCAGAGGAATTTTTGAAATGTGAATTGCTGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGGGTTGTCTTACTCAGAGGAATTTTTGAAATGTGAATTGCTGG  994

seq1  CTGAAATTATACATTTTTAAATATTTGGAGTGTTTTCCACAGAAATGTTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTATACATTTTTAAATATTTGGAGTGTTTTCCACAGAAATGTTA  1044

seq1  ATTGACTATATATACTAGCCCAGTAATTAGTTGCATTAATCGGTTGTGAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTATATATACTAGCCCAGTAATTAGTTGCATTAATCGGTTGTGAT  1094

seq1  GGTTAAAAGGCCTGTTCAATATATACCTGCTCCATAGAGAGCTCCCTCTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAAGGCCTGTTCAATATATACCTGCTCCATAGAGAGCTCCCTCTC  1144

seq1  ACACTTAAGGAATTC  1161
      |||||||||||||||
seq2  ACACTTAAGGAATTC  1159


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