BAC Information

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BAC

Clone NameB6Ng01-199B15
Chromosome7 (Build37)
Map Location 129,160,217 - 129,265,384
singlet/doubletdoublet
Overlap geneGga2, Ears2, Ubfd1, Ndufab1, Palb2
Upstream geneMettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31, Scnn1g, Scnn1b, Cog7
Downstream geneDctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199B15.bB6Ng01-199B15.g
ACCGA020525GA020526
length390533
definitionB6Ng01-199B15.b B6Ng01-199B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,264,995 - 129,265,384)(129,160,217 - 129,160,753)
sequence
cagaatagcttgggctacagagaaaccctgactctagaaacaaaagagaa
agagagagacaaagagagagacagagagacagagagtaggggtgtggggg
tgcacacttgtaatcccagcacttgggacttgggaggccagctggatcta
cctttcaagttctaaaccagcctggataccaacctgcaagtgtcaggtag
gcaaggacaacctgcctgtgacaatgactctggcccccaagcaacatctc
taccaagcaacatctctacctattgagtcattcattttctttaattgatg
agttgttcaccaggatctttaatttccaaacaagtcagttcttgtgggct
aactttgtgtgtggggtgtgtgtgtgtgtgtgtgtgtgtg
tctgtgtagccctggctgtcctggaactcagtgtagaccaggctggcctc
aaactcagagatccacctgcctctgcctcttgagtgctgggatgaaaggc
atgcaccacccagctttttggggggcatagctgttgtctttgtatgtttc
ggtaacagcttcctcatgctgctttggggaactatcccttctcaaaccaa
agtctaaagttcacctaggactcatcactgccctcttccacccctctggt
ctggtaatcttcctatgacatcctcttggtcatccagatctcaagaccac
agtctaagccatcaggtccacagacagagcagttacttttgaaagtcatg
gtgaaatgagacatttctgcagtgaatgaggcagggagcataggcctgag
caaatccaagaaacaaaagctcagtggcaggacggagcattatggggtta
ggcccgctcccactctgagcctttctttctttctatctgggtttcagcct
ctgtttctgacatcttatgcctgtaatgtggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129264995_129265384
seq2: B6Ng01-199B15.b_39_428 (reverse)

seq1  CACACACACACACACACACACACACCCCACACACAAAGTTAGCCCACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACCCCACACACAAAGTTAGCCCACAAG  50

seq1  AACTGACTTGTTTGGAAATTAAAGATCCTGGTGAACAACTCATCAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTTGTTTGGAAATTAAAGATCCTGGTGAACAACTCATCAATTAA  100

seq1  AGAAAATGAATGACTCAATAGGTAGAGATGTTGCTTGGTAGAGATGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGAATGACTCAATAGGTAGAGATGTTGCTTGGTAGAGATGTTGC  150

seq1  TTGGGGGCCAGAGTCATTGTCACAGGCAGGTTGTCCTTGCCTACCTGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGCCAGAGTCATTGTCACAGGCAGGTTGTCCTTGCCTACCTGACA  200

seq1  CTTGCAGGTTGGTATCCAGGCTGGTTTAGAACTTGAAAGGTAGATCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGTTGGTATCCAGGCTGGTTTAGAACTTGAAAGGTAGATCCAGC  250

seq1  TGGCCTCCCAAGTCCCAAGTGCTGGGATTACAAGTGTGCACCCCCACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCCAAGTCCCAAGTGCTGGGATTACAAGTGTGCACCCCCACACC  300

seq1  CCTACTCTCTGTCTCTCTGTCTCTCTCTTTGTCTCTCTCTTTCTCTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCTCTGTCTCTCTGTCTCTCTCTTTGTCTCTCTCTTTCTCTTTTG  350

seq1  TTTCTAGAGTCAGGGTTTCTCTGTAGCCCAAGCTATTCTG  390
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGAGTCAGGGTTTCTCTGTAGCCCAAGCTATTCTG  390

seq1: chr7_129160217_129160753
seq2: B6Ng01-199B15.g_59_596

seq1  GAATTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAGTGTAGACCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCAGTGTAGACCAGGCT  50

seq1  GGCCTCAAACTCAGAGATCCACCTGCCTCTGCCTCTTGAGTGCTGGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAAACTCAGAGATCCACCTGCCTCTGCCTCTTGAGTGCTGGGATG  100

seq1  AAAGGCATGCACCACCCAGCTTTTTGGGGGGCATAGCTGTTGTCTTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATGCACCACCCAGCTTTTTGGGGGGCATAGCTGTTGTCTTTGTA  150

seq1  TGTTTCGGTAACAGCTTCCTCATGCTGCTTTGGGGAACTATCCCTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGGTAACAGCTTCCTCATGCTGCTTTGGGGAACTATCCCTTCTCA  200

seq1  AACCAAAGTCTAAAGTTCACCTAGGACTCATCACTGCCCTCTTCCACCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGTCTAAAGTTCACCTAGGACTCATCACTGCCCTCTTCCACCCC  250

seq1  TCTGGTCTGGTAATCTTCCTATGACATCCTCTTGGTCATCCAGATCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTGGTAATCTTCCTATGACATCCTCTTGGTCATCCAGATCTCAA  300

seq1  GACCACAGTCTAAGCCATCAGGTCCACAGACAGAGCAGTTACTTTTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAGTCTAAGCCATCAGGTCCACAGACAGAGCAGTTACTTTTGAAA  350

seq1  GTCATGGTGAAATGAGACATTTCTGCAGTGAATGAGGCAGGGAGCAGAGG  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCATGGTGAAATGAGACATTTCTGCAGTGAATGAGGCAGGGAGCATAGG  400

seq1  CCTGAGCAAATCCAAGAAACAAAAGCTCAGTGGCAGGACGGAGCAGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTGAGCAAATCCAAGAAACAAAAGCTCAGTGGCAGGACGGAGCATTATG  450

seq1  GGGTTAGGCCCGCTCCCACTCTGAGCCTTTCTTTCTTTCTATCTGGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGCCCGCTCCCACTCTGAGCCTTTCTTTCTTTCTATCTGGGTTT  500

seq1  CAGCCTCTGTAACTGACATCTTAGGCCTG-AATGTGGT  537
      ||||||||||  ||||||||||| ||||| ||||||||
seq2  CAGCCTCTGTTTCTGACATCTTATGCCTGTAATGTGGT  538