BAC Information

Click to search

BAC

Clone NameB6Ng01-199I22
Chromosome7 (Build37)
Map Location 23,062,832 - 23,063,860
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625
Downstream geneLOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083, EG667586, EG667599, LOC100043086, LOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199I22.bB6Ng01-199I22.g
ACCGA020860GA020861
length1,2081,049
definitionB6Ng01-199I22.b B6Ng01-199I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgcggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttttattgaa
aggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaa
cacagaagtggatgctcacagtcagcttaatggatggatcatagggctcc
caattggaggagctagagaaagtagccaaggagctaagggatctgcaacc
ctaataggtggaacaacattatgagctaaccagtaccctcggagcttctt
gactctagctgcattatatatcaaaaaagatgggccttagtcgcatcact
tgtaaggagaggtccaatgcacttgcaaattttatatgtctcaagtacat
ggataccatgaccaaaaagggggagttgcttggtcaggggggaaacttgt
cgtggcgt
gaattctttaaagaaagttaaaaaataaaaaaaagaaaagaaaagtagaa
aagtacttcaggagagagagagagagagagagagagagagagagagagag
agaaagagagagagagaaagaatatgagaataggaaatgggcttttcaag
ggagactcacagtttcttggtagtggatagacataagatcttaatggctc
tcaagttacacttctaaggttgctaagaaatattacacacacacacacac
acacacacacacacacacacactttgtggtgtaatttgtggtgctggaga
gacagctcagtgattaaaaatgtttgctgctcttctagaggacccacgtt
tggttctgacatgagtgactcaccgctgcctgtaaactccagcttcagtc
tactgataatcatcttctgacctctgcgcacataacacacacacacacac
acacacacacattgggggggtatgggaattttaaagtatttttaaaagaa
tgttattttgtaatgttaaaaatcaaaggcattgaggcttgggagagtgc
agcaggtggactgcagagctgaagtggaccaagcatactgtagccttggg
cttctgcagcctaaggccttccttttccgcaccacttgctgggtccctgt
ttccagggtgcacagtggagaaggaccaggctgtgccatgacaccctggg
actattgggcagcgtgcttgtttagcatcatcctgctgaagccaccatgt
ttgagtttgcatcctgaggttccacaaggtcgattggactgtcactgctg
ctgttgatttttaggtcttatgttcctgtttttggagaaaaaacataatt
taccaccttctgtttagttgaaatcaaatttagctttttgggataaaatg
agtgaagattttcgctccacctggcaaaggctgggctgactttaagaact
cagggcaaagaggagcaaggtccagggcatcccttccaggaccttggatg
ggggaagatgaagggagaagaaagaagcaataagaaacaagtagatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_23062832_23063860
seq2: B6Ng01-199I22.g_66_1114

seq1  GAATTCTTTAAAGAAAGTTAAAAAATAAAAAAAAGAAAAGAAAAGTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGAAAGTTAAAAAATAAAAAAAAGAAAAGAAAAGTAGAA  50

seq1  AAGTACTTCAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTCAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  100

seq1  AGAAAGAGAGAGAGAGAAAGAATATGAGAATAGGAAATGGGCTTTTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGAGAGAGAGAAAGAATATGAGAATAGGAAATGGGCTTTTCAAG  150

seq1  GGAGACTCACAGTTTCTTGGTAGTGGATAGACATAAGATCTTAATGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTCACAGTTTCTTGGTAGTGGATAGACATAAGATCTTAATGGCTC  200

seq1  TCAAGTTACACTTCTAAGGTTGCTAAGAAATATTACACACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTACACTTCTAAGGTTGCTAAGAAATATTACACACACACACACAC  250

seq1  ACACACACACACACACACACACTTTGTGGTGTAATTTGTGGTGCTGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACTTTGTGGTGTAATTTGTGGTGCTGGAGA  300

seq1  GACAGCTCAGTGATTAAAAATGTTTGCTGCTCTTCTAGAGGACCCACGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTCAGTGATTAAAAATGTTTGCTGCTCTTCTAGAGGACCCACGTT  350

seq1  TGGTTCTGACATGAGTGACTCACCGCTGCCTGTAAACTCCAGCTTCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGACATGAGTGACTCACCGCTGCCTGTAAACTCCAGCTTCAGTC  400

seq1  TACTGATAATCATCTTCTGACCTCTGCGCACATAACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATAATCATCTTCTGACCTCTGCGCACATAACACACACACACACAC  450

seq1  ACACACACACATTGGGGGGGTATGGGAATTTTAAAGTATTTTTAAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACATTGGGGGGGTATGGGAATTTTAAAGTATTTTTAAAAGAA  500

seq1  TGTTATTTTGTAATGTTAAAAATCAAAGGCATTGAGGCTTGGGAGAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTTGTAATGTTAAAAATCAAAGGCATTGAGGCTTGGGAGAGTGC  550

seq1  AGCAGGTGGACTGCAGAGCTGAAGTGGACCAAGCATACTGTAGCCTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGGACTGCAGAGCTGAAGTGGACCAAGCATACTGTAGCCTTGGG  600

seq1  CTTCTGCAGCCTAAGGCCTTCCTTTTCCGCACCACTTGCTGGGTCCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGCCTAAGGCCTTCCTTTTCCGCACCACTTGCTGGGTCCCTGT  650

seq1  TTCCAGGGTGCACAGTGGAGAAGGACCAGGCTGTGCCATGACACCCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGGTGCACAGTGGAGAAGGACCAGGCTGTGCCATGACACCCTGGG  700

seq1  ACTATTGGGCAGCGTGCTTGTTTAGCATCATCCTGCTGAAGCCACCATG-  749
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTATTGGGCAGCGTGCTTGTTTAGCATCATCCTGCTGAAGCCACCATGT  750

seq1  TTGAGTTTGCATCCTGAGGTTCCACAAGGTCGATTGGACTGTCACTGCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTGCATCCTGAGGTTCCACAAGGTCGATTGGACTGTCACTGCTG  800

seq1  CTGTTGA-TTTTAGGTCTTATGTCCCTG-TTTTGGAG-AAAAACATAA-T  845
      ||||||| ||||||||||||||| |||| |||||||| |||||||||| |
seq2  CTGTTGATTTTTAGGTCTTATGTTCCTGTTTTTGGAGAAAAAACATAATT  850

seq1  TACCACC-TCTGTTTAGTTGAAATCAAA-TTAGCTTTT--GGAT-AAATG  890
      ||||||| |||||||||||||||||||| |||||||||  |||| |||||
seq2  TACCACCTTCTGTTTAGTTGAAATCAAATTTAGCTTTTTGGGATAAAATG  900

seq1  AGTGAAGA-TTTCGCTCCACCTG--CAAGGCT-GGCTGACTTTA--GACT  934
      |||||||| ||||||||||||||   |||||| |||||||||||   |||
seq2  AGTGAAGATTTTCGCTCCACCTGGCAAAGGCTGGGCTGACTTTAAGAACT  950

seq1  CAGGGCAAAGAGGAGC-AGGTCCA-GGCAT-CCTTCCAGGGACCTGGATG  981
      |||||||||||||||| ||||||| ||||| |||||||||  | ||||||
seq2  CAGGGCAAAGAGGAGCAAGGTCCAGGGCATCCCTTCCAGGACCTTGGATG  1000

seq1  GGGGAAGATG-AGGGAGGAGGAAAGAGCAATAAAGAAACAAG-AGATGCC  1029
      |||||||||| |||||| || ||  |||||| |||||||||| |||||||
seq2  GGGGAAGATGAAGGGAGAAGAAAGAAGCAAT-AAGAAACAAGTAGATGCC  1049