BAC Information

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BAC

Clone NameB6Ng01-199O08
Chromosome7 (Build37)
Map Location 124,339,356 - 124,340,338
singlet/doubletsinglet
Overlap genenone
Upstream geneRps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199O08.bB6Ng01-199O08.g
ACCGA021107GA021108
length997994
definitionB6Ng01-199O08.b B6Ng01-199O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtattagtcagggttctctagagtcacagaa
cttatggatagtctctagataataaaggaatttattgatgacttacagtc
ggcagctcaattcccaacaatcgttcagtcacagctgtgaatggaagtcc
aaggatctagcagttactcagtctcacgcagcaagcaggcgaaggagcag
gagcaagagcaagagctagactcccttcttccaatgtccttatattgtct
ccagcaaaaggtgtagcccagattaaatgtgtgttccaccacacctttaa
tcccagatgaaaggcatagcccagattaaaggtgtgttccttaactcgga
gattcaatcttctggaatccatagccactatggctcaagatcttcaaacc
aagatccagataaggatctccaagcctccagataagggtcactggtgagc
cttccaattccgaattgtagttcattccaaatattgtcaagttgacaacc
aggaatagccactacaagctctgaaccccatttttaatggggtgttttga
atttttggagtctagcttctttaactctttatataaattgtatattagtc
ccctatcagttttaggactgataaaaaaccctttcccaatctgttggtgg
cttttttgtctttattgacggtatcttttgccttacagaagctttgcaat
tttatgaggtcccatttgtcaattcttgatcttacagcacaagccattga
tgttctattcaggaatttttcccctgtgcccatatgttcgaggttttccc
ccactttctcctctattaattttagtgtctctggtcttatgttgaggtct
ttgatccactttagacttgagttttgtacaaggagattagactgggatga
attcgcatttcttctacatgataacggccagttctgcccagcacccattt
gttgaaaaatgctgtcctttttccaactgggatcattttaagctccc
gaattcagaaatgactagtctttttagtttcacaaatagtgctacaggaa
ggactctggggccctagagcaaggtaacaagaacagcgagttgggtgggg
agatggctctgtgggtgtgctagttagtctttgtcaacttgacacaaact
aaagtcacctgggaagagagaacctcaactgtaggattgcctctatcgga
ttggcctgtgggcagatctctgcgggtatttttctgattaatggttagtg
tgggaggatccaggccactgagagtggttcttgcactgggcaggtggtcc
tagtgtataaggatgccaactgagcaagctgagtggagcaagccacggga
atcaagccagtaatcggcactcctccatggcctcagtttcagttcttgtc
tctatgttcctgccttggcttccctcagtgatggagatgctggatggtag
ccagtaaggcaagtaagtcccctcctccccaagatgattttggttatttt
tttttaacacagcaagaggaaagtaagtaggacagtcagcaagtacttgc
caggagttcatttcccagaacccacaaaaaatccagcagagtgacacatc
tgtaatctcagtgttgggcaaacagagacagaagatctttcatgttttca
ctagtcagctgcagtcacgtggtcatcgagctccaggtttcactgagaga
ccccacttcaaagagaataaggttgagtgtggttgaggaagatctcatca
ttccatctctgaccactatacacactacatatacgccacatgcgtgcatg
tgtacacttactcacacacatacatacacacacatacactcacacacaga
ggtactgagagggagctcaaagaaaactctcaagagctctaaaggtacag
atactaacttagattgggtcctttgcaggctgctcactttattgtttgta
gaatccttgcaatttaacagcacagaatagctatgaagcttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124339356_124340338
seq2: B6Ng01-199O08.g_66_1059 (reverse)

seq1  ATGATGCTTCAT-GCT-CTCTGTGCTGTT-AATTGCAAGGATTCTACAAA  47
      |||| ||||||| |||  ||||||||||| ||||||||||||||||||||
seq2  ATGAAGCTTCATAGCTATTCTGTGCTGTTAAATTGCAAGGATTCTACAAA  50

seq1  CAATAAGGTGAGCAGCCTGCAAAGGA-CCAGTCTAAGTTAGTATCTGTAC  96
      |||||| ||||||||||||||||||| ||| |||||||||||||||||||
seq2  CAATAAAGTGAGCAGCCTGCAAAGGACCCAATCTAAGTTAGTATCTGTAC  100

seq1  CTTTAGAGCTCTTGA-AGTTTTCTTTGAGCT-CCTCTCAGTGCCTCTGTG  144
      ||||||||||||||| ||||||||||||||| ||||||||| ||||||||
seq2  CTTTAGAGCTCTTGAGAGTTTTCTTTGAGCTCCCTCTCAGTACCTCTGTG  150

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTACACATGCA  194
      |||| |||| ||||||||| ||| |||||||| ||| |||||||||||||
seq2  TGTGAGTGTATGTGTGTGTATGTATGTGTGTGAGTAAGTGTACACATGCA  200

seq1  CGCATGT-GCGTATATGTAGTGTGTATAGTGGTCAGAGATGG-ATGTTGA  242
      ||||||| |||||||||||||||||||||||||||||||||| ||| |||
seq2  CGCATGTGGCGTATATGTAGTGTGTATAGTGGTCAGAGATGGAATGATGA  250

seq1  GTTCTTCCTCAACCACACTCAACCTTATTCTCTTTGAAGTGGGGTCTCTC  292
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCTCAACCACACTCAACCTTATTCTCTTTGAAGTGGGGTCTCTC  300

seq1  AGTG-AACCTGGAGCTCGATGACCACGTGACTGCAGCTGACTAGTG-AAA  340
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTGAAACCTGGAGCTCGATGACCACGTGACTGCAGCTGACTAGTGAAAA  350

seq1  CATG-AAGATCTTCTGTCTCTGTTTGCCCAACACTGAGATTACAGATGTG  389
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGATCTTCTGTCTCTGTTTGCCCAACACTGAGATTACAGATGTG  400

seq1  TCACTCTGCTGGATTTTTTGTGGGTTCTGGGAAATGAACTCCTGGCAAGT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGCTGGATTTTTTGTGGGTTCTGGGAAATGAACTCCTGGCAAGT  450

seq1  ACTTGCTGACTGTCCTACTTACTTTCCTCTTGCTGTGTTAAAAAAAAATA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTGACTGTCCTACTTACTTTCCTCTTGCTGTGTTAAAAAAAAATA  500

seq1  ACCAAAATCATCTTGGGGAGGAGGGGACTTACTTGCCTTACTGGCTACCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAATCATCTTGGGGAGGAGGGGACTTACTTGCCTTACTGGCTACCA  550

seq1  TCCAGCATCTCCATCACTGAGGGAAGCCAAGGCAGGAACATAGAGACAAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCATCTCCATCACTGAGGGAAGCCAAGGCAGGAACATAGAGACAAG  600

seq1  AACTGAAACTGAGGCCATGGAGGAGTGCCGATTACTGGCTTGATTCCCGT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAACTGAGGCCATGGAGGAGTGCCGATTACTGGCTTGATTCCCGT  650

seq1  GGCTTGCTCCACTCAGCTTGCTCAGTTGGCATCCTTATACACTAGGACCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTCCACTCAGCTTGCTCAGTTGGCATCCTTATACACTAGGACCA  700

seq1  CCTGCCCAGTGCAAGAACCACTCTCAGTGGCCTGGATCCTCCCACACTAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCAGTGCAAGAACCACTCTCAGTGGCCTGGATCCTCCCACACTAA  750

seq1  CCATTAATCAGAAAAATACCCGCAGAGATCTGCCCACAGGCCAATCCGAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAATCAGAAAAATACCCGCAGAGATCTGCCCACAGGCCAATCCGAT  800

seq1  AGAGGCAATCCTACAGTTGAGGTTCTCTCTTCCCAGGTGACTTTAGTTTG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAATCCTACAGTTGAGGTTCTCTCTTCCCAGGTGACTTTAGTTTG  850

seq1  TGTCAAGTTGACAAAGACTAACTAGCACACCCACAGAGCCATCTCCCCAC  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTTGACAAAGACTAACTAGCACACCCACAGAGCCATCTCCCCAC  900

seq1  CCAACTCGCTGTTCTTGTTACCTTGCTCTAGGGCCCCAGAGTCCTTCCTG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCGCTGTTCTTGTTACCTTGCTCTAGGGCCCCAGAGTCCTTCCTG  950

seq1  TAGCACTATTTGTGAAACTAAAAAGACTAGTCATTTCTGAATTC  983
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTATTTGTGAAACTAAAAAGACTAGTCATTTCTGAATTC  994