BAC Information

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BAC

Clone NameB6Ng01-200B24
Chromosome7 (Build37)
Map Location 107,307,386 - 107,432,124
singlet/doubletdoublet
Overlap gene2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1
Upstream geneDgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3
Downstream geneP4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200B24.bB6Ng01-200B24.g
ACCGA021273GA021274
length943697
definitionB6Ng01-200B24.b B6Ng01-200B24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,431,401 - 107,432,124)(107,307,386 - 107,308,077)
sequence
gaattcaccattaaagtcagttaattctaagctttcttttgggagatgtt
ttggttcttgattcagtctccatagcaactgttttagagcaggctgcatg
gcaatggagtctcttaatgttctttcctctaggattgctttattgctgag
gcttgtctccctggctataaaatttcacgttcacattgctttccttctgg
caccttaacgttctctgtcctctgtggaaaatgcccagctccttcagtca
ctctggtaacgttctctctagctagtttcaaagagttttctgtcatattt
cctttgcttttatctttcagcagtttaatgctaggcatcgaattctttga
gtttgtcctttttagaggtcacttaaatgtcttgcttctgtaagttgtga
cttttatcaaatttgagaactggtcctacttttttttttttttcctgaat
tgtcttgaattttttgaatgcagaaatctggtacttcctatcaggtcttt
gaggctcgggttatttttaaagtgatttttctctcattcacattacacac
tttctgtggatctgtgtttaaatatgccaactcctctgtcacctcaattc
tgcaatcagtcttagcatttctatttggtttgtcctcttgtcttctgtct
ttctcagctttctcttcatttcaagcatgctcacccgggcttcctagagc
atcgtctaacattgttttcaacaccttcaacatttgtgctttgttgtcat
caacatttatcggctgccttttctgttttgtttttctcttttatttcctt
tttatgctaattgagattttctttactctttgtatgctaagaattctttg
gattgaacactggacagttggaattttatgtcctacgtgtctggctcttt
cttttactttctcttctggcacgccattattccaggtagtctc
gaattctgtttttctttccatcattgaggaaaatacgtaataaataaatt
aattaaattaaaaaaaagaatttacatggtgaaacagaaagacaatttct
gaatattgtcaaaaaaaaaaactttaatattagcttgtcagctgtgaaca
cctaagcttccagggttggatcttcgtttctcaaatactctacactgcac
ggtccaagttcctgcagaacacagaacatactaaaaaatgattattggaa
tgaatgggtggttaagaccaatcctgcctggacttcgggtcacacaggta
ggcgggaactgaagctccactcgggctgaagctcaggggcgtggcccaga
gtccccgccccgagacccgccagaaggcgtggcccacgcacgccgcctcc
cgcgcgatgtcgctgcctgtggtccggctcgtttggcttggtcgggtgca
ctactcggagctgctggcgttgcaggagcattggctacggcggctacagg
cagaccctcgccctgggaccctgtcggggaccaaagcgggtgtgctcttg
gtctgcgagccagcggggccccgtatacacgggcgggctacgcgggtggc
cctgacaccccgaggagactacgcggctgagggccttgggcgccgaggtg
cgcgcctccggccgcggcggcctggccactttctcacggcccgggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107431401_107432124
seq2: B6Ng01-200B24.b_46_769 (reverse)

seq1  GTGTTGAAAACAATGTTAGACGATGCTCTAGGAAGCCCGGGTGAGCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAAAACAATGTTAGACGATGCTCTAGGAAGCCCGGGTGAGCATGC  50

seq1  TTGAAATGAAGAGAAAGCTGAGAAAGACAGAAGACAAGAGGACAAACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGAAGAGAAAGCTGAGAAAGACAGAAGACAAGAGGACAAACCAA  100

seq1  ATAGAAATGCTAAGACTGATTGCAGAATTGAGGTGACAGAGGAGTTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATGCTAAGACTGATTGCAGAATTGAGGTGACAGAGGAGTTGGCA  150

seq1  TATTTAAACACAGATCCACAGAAAGTGTGTAATGTGAATGAGAGAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAACACAGATCCACAGAAAGTGTGTAATGTGAATGAGAGAAAAAT  200

seq1  CACTTTAAAAATAACCCGAGCCTCAAAGACCTGATAGGAAGTACCAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTAAAAATAACCCGAGCCTCAAAGACCTGATAGGAAGTACCAGATT  250

seq1  TCTGCATTCAAAAAATTCAAGACAATTCAGGAAAAAAAAAAAAAAGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTCAAAAAATTCAAGACAATTCAGGAAAAAAAAAAAAAAGTAGG  300

seq1  ACCAGTTCTCAAATTTGATAAAAGTCACAACTTACAGAAGCAAGACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTCTCAAATTTGATAAAAGTCACAACTTACAGAAGCAAGACATTT  350

seq1  AAGTGACCTCTAAAAAGGACAAACTCAAAGAATTCGATGCCTAGCATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACCTCTAAAAAGGACAAACTCAAAGAATTCGATGCCTAGCATTAA  400

seq1  ACTGCTGAAAGATAAAAGCAAAGGAAATATGACAGAAAACTCTTTGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGAAAGATAAAAGCAAAGGAAATATGACAGAAAACTCTTTGAAAC  450

seq1  TAGCTAGAGAGAACGTTACCAGAGTGACTGAAGGAGCTGGGCATTTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGAGAGAACGTTACCAGAGTGACTGAAGGAGCTGGGCATTTTCCA  500

seq1  CAGAGGACAGAGAACGTTAAGGTGCCAGAAGGAAAGCAATGTGAACGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACAGAGAACGTTAAGGTGCCAGAAGGAAAGCAATGTGAACGTGA  550

seq1  AATTTTATAGCCAGGGAGACAAGCCTCAGCAATAAAGCAATCCTAGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATAGCCAGGGAGACAAGCCTCAGCAATAAAGCAATCCTAGAGGA  600

seq1  AAGAACATTAAGAGACTCCATTGCCATGCAGCCTGCTCTAAAACAGTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATTAAGAGACTCCATTGCCATGCAGCCTGCTCTAAAACAGTTGC  650

seq1  TATGGAGACTGAATCAAGAACCAAAACATCTCCCAAAAGAAAGCTTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGACTGAATCAAGAACCAAAACATCTCCCAAAAGAAAGCTTAGAA  700

seq1  TTAACTGACTTTAATGGTGAATTC  724
      ||||||||||||||||||||||||
seq2  TTAACTGACTTTAATGGTGAATTC  724

seq1: chr7_107307386_107308077
seq2: B6Ng01-200B24.g_66_762

seq1  GAATTCTGTTTTTCTTTCCATCATTGAGGAAAATACGTAATAAATAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTTCTTTCCATCATTGAGGAAAATACGTAATAAATAAATT  50

seq1  AATTAAATTAAAAAAAAGAATTTACATGGTGAAACAGAAAGACAATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTAAAAAAAAGAATTTACATGGTGAAACAGAAAGACAATTTCT  100

seq1  GAATATTGTCAAAAAAAAAAACTTTAATATTAGCTTGTCAGCTGTGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGTCAAAAAAAAAAACTTTAATATTAGCTTGTCAGCTGTGAACA  150

seq1  CCTAAGCTTCCAGGGTTGGATCTTCGTTTCTCAAATACTCTACACTGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCTTCCAGGGTTGGATCTTCGTTTCTCAAATACTCTACACTGCAC  200

seq1  GGTCCAAGTTCCTGCAGAACACAGAACATACTAAAAAATGATTATTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAAGTTCCTGCAGAACACAGAACATACTAAAAAATGATTATTGGAA  250

seq1  TGAATGGGTGGTTAAGACCAATCCTGCCTGGACTTCGGGTCACACAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGGTGGTTAAGACCAATCCTGCCTGGACTTCGGGTCACACAGGTA  300

seq1  GGCGGGAACTGAAGCTCCACTCGGGCTGAAGCTCAGGGGCGTGGCCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGAACTGAAGCTCCACTCGGGCTGAAGCTCAGGGGCGTGGCCCAGA  350

seq1  GTCCCCGCCCCGAGACCCGCCAGAAGGCGTGGCCCACGCACGCCGCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCGCCCCGAGACCCGCCAGAAGGCGTGGCCCACGCACGCCGCCTCC  400

seq1  CGCGCGATGTCGCTGCCTGTGGTCCGGCTCGTTTGGCTTGGTCGGGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCGATGTCGCTGCCTGTGGTCCGGCTCGTTTGGCTTGGTCGGGTGCA  450

seq1  CTACTCGGAGCTGCTGGCGTTGCAGGAGCATTGGCTACGGCGGCTACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCGGAGCTGCTGGCGTTGCAGGAGCATTGGCTACGGCGGCTACAGG  500

seq1  CAGACCCTCGCCCTGGGACCCTGTCGGGGACCAAAGCGGGTGTGCTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTCGCCCTGGGACCCTGTCGGGGACCAAAGCGGGTGTGCTCTTG  550

seq1  GTCTGCGAGCCAGCGGGG-CCCGTATACACGGGCGGGCTACGC-GGTGG-  597
      |||||||||||||||||| |||||||||||||||||||||||| ||||| 
seq2  GTCTGCGAGCCAGCGGGGCCCCGTATACACGGGCGGGCTACGCGGGTGGC  600

seq1  CCTGACA-CCCGAGGAGACTACGCGGCTGAGGGCCTTGGGCGCCGAGGTG  646
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACACCCCGAGGAGACTACGCGGCTGAGGGCCTTGGGCGCCGAGGTG  650

seq1  CGCGCCACCGGCCGCGGCGGCCTGGCCACTTTC-CACGGCCCGGGCC  692
      |||||| |||||||||||||||||||||||||| |||||||||||||
seq2  CGCGCCTCCGGCCGCGGCGGCCTGGCCACTTTCTCACGGCCCGGGCC  697