BAC Information

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BAC

Clone NameB6Ng01-200F03
Chromosome7 (Build37)
Map Location 103,139,761 - 103,140,713
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666823, Frda-ps
Downstream geneEG666836, Odz4, LOC670727, LOC666858, Nars2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200F03.bB6Ng01-200F03.g
ACCGA021414GA021415
length366962
definitionB6Ng01-200F03.b B6Ng01-200F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgaaattcttaggcaactggagagaactagaaaatatcatgtgtgttct
tttgtgagtgaggtaacccagtcacaaaagaacacacatggtatgcactc
tctgataagtcgatattcatccagaagctcggaatacccaaaatacagtt
tgcagaccacttgaagctcaagaagaaggaagagcaaagtgtggacactt
caacccttcttagaaggggggacaaaatacccatggaaggagttacagag
acaaagtgtggagcagagactgaaggaaaggcccttggtcctgtgaaggc
tctctgtggtagtgtaggagaatgtcaggatcaggaatcaggagtgggtg
ggttggtgagcagggg

gaattcccatcaccacacctcacgtgtcagtgcccacggcctcctgagac
tacaaaagcttcccctctgctatctggagccaccgcacgtcggaaagcat
tttgtcccatttgtccagggacaggcgcatgggaaaatgccactcaatta
agcccttttgggtttccttagagctcttgccaaaatcataattgcatatt
aatttgcaactcaagtgagttttcctaattgcagctaggggagggggtcg
aggacccacgtgtgtatcagagggaagacaagatgctgctgcctaatgag
cctctgtaggaaaaggtcaaggttaaaggcttgcttcatcaatccttaaa
ggtctgatgggggtggtgaactcccattggaattgagctcattttcatat
gtatacactctaggaaataggattgagggggcggatctgagcatacacaa
gacacttcccaccacagtcccagagtggaaaatgtagtgcaagccacacc
ctctgtcttaccttctcttgctcagtcaggtttacatcttatcatctgta
gaatgggaatgagaatttgccaacgaatggattcaaattaaatggatcat
gtaaaattcctcaccccacatgtagcaattaaggagcctaataaatgaca
gctgctatttttatcttatttgttcctatgactatagagtgtcaggaacc
acagttgctccagctttgcaaaccaacatgcctttttaaaaagaagaaac
tcatttgaggaatgtgagtagaaatgggagggaccagcacagcatttggg
attgatttgagctctggcagaaggatgggtggggcacaggcacatgggag
aatgacagtttaggagtcagagtaaggggacctagaaacaaaggaaaact
ctttgggcatttttattccttaggataaacacacaacattataccattct
ctcccttgctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103139761_103140713
seq2: B6Ng01-200F03.g_68_1029

seq1  GAATTCCCATCACCACACCTCACGTGTCAGTGCCCACGGCCTCCTGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCACCACACCTCACGTGTCAGTGCCCACGGCCTCCTGAGAC  50

seq1  TACAAAAGCTTCCCCTCTGCTATCTGGAGCCACCGCACGTCGGAAAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGCTTCCCCTCTGCTATCTGGAGCCACCGCACGTCGGAAAGCAT  100

seq1  TTTGTCCCATTTGTCCAGGGACAGGCGCATGGGAAAATGCCACTCAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCATTTGTCCAGGGACAGGCGCATGGGAAAATGCCACTCAATTA  150

seq1  AGCCCTTTTGGGTTTCCTTAGAGCTCTTGCCAAAATCATAATTGCATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTTTGGGTTTCCTTAGAGCTCTTGCCAAAATCATAATTGCATATT  200

seq1  AATTTGCAACTCAAGTGAGTTTTCCTAATTGCAGCTAGGGGAGGGGGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAACTCAAGTGAGTTTTCCTAATTGCAGCTAGGGGAGGGGGTCG  250

seq1  AGGACCCACGTGTGTATCAGAGGGAAGACAAGATGCTGCTGCCTAATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCACGTGTGTATCAGAGGGAAGACAAGATGCTGCTGCCTAATGAG  300

seq1  CCTCTGTAGGAAAAGGTCAAGGTTAAAGGCTTGCTTCATCAATCCTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTAGGAAAAGGTCAAGGTTAAAGGCTTGCTTCATCAATCCTTAAA  350

seq1  GGTCTGATGGGGGTGGTGAACTCCCATTGGAATTGAGCTCATTTTCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGATGGGGGTGGTGAACTCCCATTGGAATTGAGCTCATTTTCATAT  400

seq1  GTATACACTCTAGGAAATAGGATTGAGGGGGCGGATCTGAGCATACACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACACTCTAGGAAATAGGATTGAGGGGGCGGATCTGAGCATACACAA  450

seq1  GACACTTCCCACCACAGTCCCAGAGTGGAAAATGTAGTGCAAGCCACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCCCACCACAGTCCCAGAGTGGAAAATGTAGTGCAAGCCACACC  500

seq1  CTCTGTCTTACCTTCTCTTGCTCAGTCAGGTTTACATCTTATCATCTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTTACCTTCTCTTGCTCAGTCAGGTTTACATCTTATCATCTGTA  550

seq1  GAATGGGAATGAGAATTTGCCAACGAATGGATTCAAATTAAATGGATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGAATGAGAATTTGCCAACGAATGGATTCAAATTAAATGGATCAT  600

seq1  GTAAAATTCCTCACCCCACATGTAGCAATTAAGGAGCCTAATAAATGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTCCTCACCCCACATGTAGCAATTAAGGAGCCTAATAAATGACA  650

seq1  GCTGCTATTTTTATCTTA-TTGTTCCTATGACTATAGAGTGTCAGGAACC  699
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTGCTATTTTTATCTTATTTGTTCCTATGACTATAGAGTGTCAGGAACC  700

seq1  ACAGTTGCTCCAGCTTTGCAAAACCAACATGCCTTTTTAAAAAAGAAGAA  749
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  ACAGTTGCTCCAGCTTTGC-AAACCAACATGCCTTTTT-AAAAAGAAGAA  748

seq1  ACTCATTTGAGGAATGTGAGTAGAAATGGGAGGGACCAGCACAGCATTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTGAGGAATGTGAGTAGAAATGGGAGGGACCAGCACAGCATTTG  798

seq1  GGA-TGATTTGAGCTCTGGCAGAAGGATGGGT-GGGCACAGGCACAT-GG  846
      ||| |||||||||||||||||||||||||||| |||||||||||||| ||
seq2  GGATTGATTTGAGCTCTGGCAGAAGGATGGGTGGGGCACAGGCACATGGG  848

seq1  AGAATGACAGTTTAGGAGCCAGAGTAAAGGGACCTAGAAACAAAGGAAAA  896
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  AGAATGACAGTTTAGGAGTCAGAGTAAGGGGACCTAGAAACAAAGGAAAA  898

seq1  CTCTTT-GGCATTTT--ATCCTTAGGATAAACACAC-ACA-TATACCA-T  940
      |||||| ||||||||   |||||||||||||||||| ||| ||||||| |
seq2  CTCTTTGGGCATTTTTATTCCTTAGGATAAACACACAACATTATACCATT  948

seq1  CTCT-CCTTGCTGG  953
      |||| |||||||||
seq2  CTCTCCCTTGCTGG  962


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