BAC Information

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BAC

Clone NameB6Ng01-200L07
Chromosome7 (Build37)
Map Location 89,896,701 - 89,897,281
singlet/doubletsinglet
Overlap geneEftud1
Upstream gene2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1, Sh3gl3, Adamtsl3, 1700129I04Rik
Downstream geneLOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik, EG666160, Tmc3, Stard5, Il16, Phgdh-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200L07.bB6Ng01-200L07.g
ACCGA021694GA021695
length1,0031,002
definitionB6Ng01-200L07.b B6Ng01-200L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagcaaaggacatgatccaaagagtaaaaacccttgatacctg
tgtgtatttaaattttttcaaatccttttttttttttttttcttgagaca
gggtttctctgtgtagccttggctgtcctggagctcactttgtagaccag
gctggcctcgaactcagaaatccacctgcttctgcctcccaagtgctggg
attaaaggcgtgagccaccaccgccaggacaaatccttttttaaaatggt
ggttcttaaatgctttaacctccctttagcccacccaccagaggtagtga
aaacaatggatacgggggaagaacctatttagaaatgttctttggagcaa
ctcccgtctgtgttgtctggaaattggcagctcagttcataggttagcag
gtagcgggagctcgatccactggcaaacacttcatggatacaccagcagt
ccagttcagttagcaccagggtgacatgacctagcagagacagtacggac
tcagcctctgctggagtcagcagcaggagggacctggagggacaccatga
aaagttctccgctgtgcctctctcagggaagcaaagatcagcgaagaagt
gagacccacaagcgctgcacagctagctgtaccagcaagctaagctcgct
ctccatcgccccgctgatccctatttataccctctaatcatcacgtgtcc
tccacaagccttgcctcagcacatgcatccagtcagcctgagtccaagga
cgtggcaagaaactgcagcacaccaccaccagaagtttcttctatggagt
cctgacaaatgctgctcaactacacagttgtaggtggggctaatcatgcg
tgttgttagccaagaacccttttattacgtcctttcacgtgctttgcttt
agcagagcattcctcctctcctgtgtctgcttcagccacaatgtttcctt
ctggagtccggccctaagcctttcacacctggtgtccacttttaataaaa
cgt
gaattcttatattggcacttgtcattctgtgctggttcattttgcttaac
ataatgacccccagtttccatccatgtcgtcacaggtgacagggttctgt
tcctgtgtcagaatatgtattccatgatataaatgcgccatggttttttt
ttatctgtttattgctgatgctcttcatctttcagctgctgtgaagtgca
cacacgtgggaaggcagattccttctcagcatactgatttcatttcctcc
agataaatatccactggtgggattgaccgaacatgtgctgcttctcttgt
aatttttttttttttagaaaattccatactgtttcccataatgggtacat
taagtgacattcctgtggaccaatggaatggcagggcccctttacttcac
accctcaccagaacttgttacctttgatctttttgatgaaattagtccta
caagagtaaggtaatatctcattgtggctcattgtggtatagtgagatca
ttcatgtgccccttggtcatatgaatgccttctcttaaaaagtgtctatt
taggtgattttgcccatttattaatggtactgcttggatttgctcactga
gatttatgcatcacacgtatgttctgagttacaccctcttctcaaaggca
tagggtacaaagcttttctctccttttgtggctcatctcttcgtttctga
aaatcgttccctttttttttgtggtgcagaagcttcgtagtgagatgaag
tcccattttgactgtgaagttgcttcctgttaccattaggggcacatcca
aaagttcttgtcttgtttcacttgcacaaacatgtgtgttcctctgcctt
cttctggtcgcttttcaggtccttaggttttcctctttcccctgtttgag
aaatggggatcgatcgtgcattcccctgtaatgccggtccccaacattgc
tttattggaagaaaccatttggtttctagtgcacttcctttagcaacctt
ta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_89896701_89897281
seq2: B6Ng01-200L07.b_49_629 (reverse)

seq1  CTTCCCTGAGAGAGGCACAGCGGAGAACTTTTCATGGTGTCCCTCCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGAGAGAGGCACAGCGGAGAACTTTTCATGGTGTCCCTCCAGGT  50

seq1  CCCTCCTGCTGCTGACTCCAGCAGAGGCTGAGTCCTGGCTGTCTCTGCTA  100
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  CCCTCCTGCTGCTGACTCCAGCAGAGGCTGAGTCCGTACTGTCTCTGCTA  100

seq1  GGTCATGTCACCCTGGTGCTAACTGAACTGGACTGCTGGTGTATCCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGTCACCCTGGTGCTAACTGAACTGGACTGCTGGTGTATCCATGA  150

seq1  AGTGTTTGCCAGTGGATCGAGCTCCCGCTACCTGCTAACCTATGAACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGCCAGTGGATCGAGCTCCCGCTACCTGCTAACCTATGAACTGA  200

seq1  GCTGCCAATTTCCAGACAACACAGACGGGAGTTGCTCCAAAGAACATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAATTTCCAGACAACACAGACGGGAGTTGCTCCAAAGAACATTTC  250

seq1  TAAATAGGTTCTTCCCCCGTATCCATTGTTTTCACTACCTCTGGTGGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGGTTCTTCCCCCGTATCCATTGTTTTCACTACCTCTGGTGGGTG  300

seq1  GGCTAAAGGGAGGTTAAAGCATTTAAGAACCACCATTTTAAAAAAGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAGGGAGGTTAAAGCATTTAAGAACCACCATTTTAAAAAAGGATT  350

seq1  TGTCCTGGCGGTGGTGGCTCACGCCTTTAATCCCAGCACTTGGGAGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGCGGTGGTGGCTCACGCCTTTAATCCCAGCACTTGGGAGGCAG  400

seq1  AAGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGCT  450

seq1  CCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCAAGAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCAAGAAAAAAAAAA  500

seq1  AAAAAAGGATTTGAAAAAATTTAAATACACACAGGTATCAAGGGTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGATTTGAAAAAATTTAAATACACACAGGTATCAAGGGTTTTTA  550

seq1  CTCTTTGGATCATGTCCTTTGCTATGAATTC  581
      |||||||||||||||||||||||||||||||
seq2  CTCTTTGGATCATGTCCTTTGCTATGAATTC  581