BAC Information

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BAC

Clone NameB6Ng01-200L17
Chromosome7 (Build37)
Map Location 83,341,083 - 83,341,766
singlet/doubletsinglet
Overlap genenone
Upstream geneSv2b, 1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
Downstream geneLOC434200, EG244071
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200L17.bB6Ng01-200L17.g
ACCGA021712GA021713
length1,218973
definitionB6Ng01-200L17.b B6Ng01-200L17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagagtgtgccttgcactccagtgatcatcctaaatgtttacaa
gaaagcacttccaagagtctcactattttgctaagatgatgtgatgggtt
gaataagaatgagccatatgcagttatcatgtagaagaaagaaaattgat
ccattcttatctccttgtacaaagctcaagtctaagtggatcaagtaact
ccacataaaaccagagactctgaaacttatagaggagaaagtggggaaaa
cccttgaagatatgggcacaggggaaaaattcctgaacagaacagcaatg
gcttgtgctgtaagatcaagaatcaacaaatgggacctcataaaatttca
aagcttctgtaaggcaaaagacactgtcaataagggccaccaacagattg
ggataagatcgttaccaatcctaaatcagataggggactaatatccaata
tatataaagaactcaagaagattgactccagaaaatcaaataaccctgtt
aaaaatggggtacagagctaaacaaataattcttacctgaggaataccaa
atggctgagaagcacctgaaaaaatgtccaacatccttaatcatcaggga
aatgcgaatcaaaacaaccctgaaattccacctcacaccagtcagaatgg
ctaagataaaaaattcaggtgacagcagatgctggtgaggaggtggagaa
agaggaacactcctccattgctggtgggattgcaagctggtacatagtac
attggaagatccagcaatacctctcctgggactatacccagaagatcctc
caacttgtaataagaacacatgctctacaatgttcatagcagccttgttt
ataatagccagaagctggaaagaacccagatgtccctcaacagaggaatg
aatatagaaaatgtggtacacttacacaatgaagtactactcagcaatga
aaaatcatgaatttttattgaaattcttaggcaaatggatgcattcttag
aaggatattcattcttggagtgaggtactcctaatccacataagagaacc
atcacattgatatgctcttcactggattaagtagctcagaaagctaggac
tacccaagattacagttttacaaaatcacatggaacctcaagaggaagga
agacgaccgtgattcctcattccattctgaaattgggggaacaaaatatc
cctcatatgtgttacaga
gaattctataacctgtcacctagaatgtggacccagggcttggcttacta
cccagaagattatctacccacaaaggctataaccacgttctcaagaggct
accactgtgaaaaaggagcctagacacatgtgccacagatgtgtggagct
ggggaggcatggcatggctgggtacattagaagaagtttgggcgcaggca
gccggccaccgtccggaccagaggacaggtgtccgcctggctcgggaggc
ggcctcagcctcaggagcagcggtcgccatcttggttccgggactccctg
gaacttaggaatttagtctgcacaggtgagagtctgcaccacagaagctg
acagcttctgggaactgccaaagcaacacagcttctgagaaaggccctgt
tttgggccttcttcttcggccaggaggaggtccaaaaacaagatatctgc
tcaccttccctgtaagagtgcttgccagcagagagtgctctgagcactga
aactcagaggagagaatctgtctcccaggtctgctgatagacggtaacag
aatcaccagaagaacaatctctaaacagagtcaactacaactactaactc
cagaaattaccagatggcgaaaggtaaaagtaggaatcctactaacagga
gccaagaccactcaccatcatcagaacccagcactcccacttcgcccagt
ccagggcatcccaacatacccgaaaacctagacctagatttaaaagcata
tctcatgatgatggtagaggacatcaagaaggactttaataaatcactta
aagaaatacaggagaacactgctaaagagttacaagtccttaaagaaaaa
caggaaaacacaacaaacaggtagaagtccttacagaaaaagaggaaaaa
acatacaaacagggtgatggaaatgaaccaaaaccatactagacctaaaa
ggggaagtagacacaataaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_83341083_83341766
seq2: B6Ng01-200L17.g_66_749

seq1  GAATTCTATAACCTGTCACCTAGAATGTGGACCCAGGGCTTGGCTTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAACCTGTCACCTAGAATGTGGACCCAGGGCTTGGCTTACTA  50

seq1  CCCAGAAGATTATCTACCCACAAAGGCTATAACCACGTTCTCAAGAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAGATTATCTACCCACAAAGGCTATAACCACGTTCTCAAGAGGCT  100

seq1  ACCACTGTGAAAAAGGAGCCTAGACACATGTGCCACAGATGTGTGGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGTGAAAAAGGAGCCTAGACACATGTGCCACAGATGTGTGGAGCT  150

seq1  GGGGAGGCATGGCATGGCTGGGTACATTAGAAGAAGTTTGGGCGCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGCATGGCATGGCTGGGTACATTAGAAGAAGTTTGGGCGCAGGCA  200

seq1  GCCGGCCACCGTCCGGACCAGAGGACAGGTGTCCGCCTGGCTCGGGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCACCGTCCGGACCAGAGGACAGGTGTCCGCCTGGCTCGGGAGGC  250

seq1  GGCCTCAGCCTCAGGAGCAGCGGTCGCCATCTTGGTTCCGGGACTCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAGCCTCAGGAGCAGCGGTCGCCATCTTGGTTCCGGGACTCCCTG  300

seq1  GAACTTAGGAATTTAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAGGAATTTAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTG  350

seq1  ACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTGAGAAAGGCCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTGAGAAAGGCCCTGT  400

seq1  TTTGGGCCTTCTTCTTCGGCCAGGAGGAGGTCCAAAAACAAGATATCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCCTTCTTCTTCGGCCAGGAGGAGGTCCAAAAACAAGATATCTGC  450

seq1  TCACCTTCCCTGTAAGAGTGCTTGCCAGCAGAGAGTGCTCTGAGCACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCCCTGTAAGAGTGCTTGCCAGCAGAGAGTGCTCTGAGCACTGA  500

seq1  AACTCAGAGGAGAGAATCTGTCTCCCAGGTCTGCTGATAGACGGTAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAGGAGAGAATCTGTCTCCCAGGTCTGCTGATAGACGGTAACAG  550

seq1  AATCACCAGAAGAACAATCTCTAAACAGAGTCAACTACAACTACTAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCAGAAGAACAATCTCTAAACAGAGTCAACTACAACTACTAACTC  600

seq1  CAGAAATTACCAGATGGCGAAAGGTAAAAGTAGGAATCCTACTAACAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTACCAGATGGCGAAAGGTAAAAGTAGGAATCCTACTAACAGGA  650

seq1  GCCAAGACCACTCACCATCATCAGAACCCAGCAC  684
      ||||||||||||||||||||||||||||||||||
seq2  GCCAAGACCACTCACCATCATCAGAACCCAGCAC  684