BAC Information

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BAC

Clone NameB6Ng01-200N08
Chromosome7 (Build37)
Map Location 93,553,525 - 93,554,634
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303
Downstream geneOlfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200N08.bB6Ng01-200N08.g
ACCGA021783GA021784
length1,1281,171
definitionB6Ng01-200N08.b B6Ng01-200N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttctgcttaacctgaatgtgaccttaactcatgagccaacac
tctagttcctctaccaatgtttgcaaagagttttccctgatgaatcttga
agactttccttagtatattttcatatttttatttcactagtaatatgttt
ttaatatattgataccatatatagttgatttttaaaagaggtaaagtatg
attaataaaccaaatatatgggataactctaaaaatattttcctggtgaa
gagaatattcttgttaaacttcattcttgaaattccatttcaactttaca
tgctttcagcagaaaaccaagaagaaaatcctttatagtttaaagtcaaa
gtaataaaatttaaggtatattcataaaaccatttaaaaatattaaatat
atttattatttacttacattagtcacccttaagaatgagttaaattttgt
tttcagatcacacagaagtttaaaattatatttagagatagaaattttct
ggttataaaggaatgtctacttcattataggaaatattagcatgttatgt
tcctcccagaggattcattctttcccttcgcttataaagaacttatcata
tttaatcaaaaagtgatatgtgtcctttgcaattaacatttctttataat
ttcctgatacatatgatgttaattcaatactcttaaatatttttcaagtt
ttttaataatttgaataaaggaatgtagttaaatgaatgtgtatttgcat
accagtcctaaaactgtgcaaatataaatattgagctttgggagacacat
tcagtacttcagaatgtaaataaattttatttccatattttgacagaaat
gaaaatagcaccagcttttgcttgaaacatggatatttaacttttgaaat
tcataaactattattttttaaattttactaatgcttatcagtttttaaag
gaccctattaaaagcttttaatttggtttgtctagtgtcaaatcttcatc
actgagaacacacaatacaaattatcataacagaattgagcaatgcttat
taaagcaatatttctggcatatacatatattattgatgaatggcaattac
tactagaaaaaagaagtcatggatttaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtaataccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctcccctat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgcgatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agctcccaaatgctgacaccatttgcatacactagcaagattttactgaa
aggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtacccaaggagctaaggggatcttcaccct
atagtggacacatttattgaactacccagtacccctgagctcctgactct
agctgcatttgtatccaaaagaatgtcctagtcgtccattcactgggaaa
gaagccattgaacacgcaacctttgtgccgtacagcgactcagtcaatgg
aggaagtggggtgacagcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93553525_93554634
seq2: B6Ng01-200N08.b_47_1174

seq1  GAATTCAGTTCTGCTTAACCTGAATGTGACCTTAACTCATGAGCCAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCTGCTTAACCTGAATGTGACCTTAACTCATGAGCCAACAC  50

seq1  TCTAGTTCCTCTACCAATGTTTGCAAAGAGTTTTCCCTGATGAATCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCCTCTACCAATGTTTGCAAAGAGTTTTCCCTGATGAATCTTGA  100

seq1  AGACTTTCCTTAGTATATTTTCATATTTTTATTTCACTAGTAATATGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCCTTAGTATATTTTCATATTTTTATTTCACTAGTAATATGTTT  150

seq1  TTAATATATTGATACCATATATAGTTGATTTTTAAAAGAGGTAAAGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATATTGATACCATATATAGTTGATTTTTAAAAGAGGTAAAGTATG  200

seq1  ATTAATAAACCAAATATATGGGATAACTCTAAAAATATTTTCCTGGTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAAACCAAATATATGGGATAACTCTAAAAATATTTTCCTGGTGAA  250

seq1  GAGAATATTCTTGTTAAACTTCATTCTTGAAATTCCATTTCAACTTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATTCTTGTTAAACTTCATTCTTGAAATTCCATTTCAACTTTACA  300

seq1  TGCTTTCAGCAGAAAACCAAGAAGAAAATCCTTTATAGTTTAAAGTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCAGCAGAAAACCAAGAAGAAAATCCTTTATAGTTTAAAGTCAAA  350

seq1  GTAATAAAATTTAAGGTATATTCATAAAACCATTTAAAAATATTAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAAATTTAAGGTATATTCATAAAACCATTTAAAAATATTAAATAT  400

seq1  ATTTATTATTTACTTACATTAGTCACCCTTAAGAATGAGTTAAATTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATTTACTTACATTAGTCACCCTTAAGAATGAGTTAAATTTTGT  450

seq1  TTTCAGATCACACAGAAGTTTAAAATTATATTTAGAGATAGAAATTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATCACACAGAAGTTTAAAATTATATTTAGAGATAGAAATTTTCT  500

seq1  GGTTATAAAGGAATGTCTACTTCATTATAGGAAATATTAGCATGTTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAAAGGAATGTCTACTTCATTATAGGAAATATTAGCATGTTATGT  550

seq1  TCCTCCCAGAGGATTCATTCTTTCCCTTCGCTTATAAAGAACTTATCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCAGAGGATTCATTCTTTCCCTTCGCTTATAAAGAACTTATCATA  600

seq1  TTTAATCAAAAAGTGATATGTGTCCTTTGCAATTAACATTTCTTTATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAAAAAGTGATATGTGTCCTTTGCAATTAACATTTCTTTATAAT  650

seq1  TTCCTGATACATATGATGTTAATTCAATACTCTTAAATATTTTTCAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGATACATATGATGTTAATTCAATACTCTTAAATATTTTTCAAGTT  700

seq1  TTTTAATAATTTGAATAAAGGAATGTAGTTAAATGAATGTGTATTTGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAATTTGAATAAAGGAATGTAGTTAAATGAATGTGTATTTGCAT  750

seq1  ACCAGTCCTAAAACTGTGCAAATATAAATATTGAGCTTTGGGAGACACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCCTAAAACTGTGCAAATATAAATATTGAGCTTTGGGAGACACAT  800

seq1  TCAGTACTTCAGAATGT-AATAAA-TTTATTTCCATATTTTGACAGAAAT  848
      ||||||||||||||||| |||||| |||||||||||||||||||||||||
seq2  TCAGTACTTCAGAATGTAAATAAATTTTATTTCCATATTTTGACAGAAAT  850

seq1  GAAAATAGCACCAGC-TTTGCTTGAAACATGGATATTTAAC-TTTGAAAT  896
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  GAAAATAGCACCAGCTTTTGCTTGAAACATGGATATTTAACTTTTGAAAT  900

seq1  TCATAAACTATTA-TTTTTAAATTTTACTAATGCTTATCAGTTTTTAAAG  945
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCATAAACTATTATTTTTTAAATTTTACTAATGCTTATCAGTTTTTAAAG  950

seq1  GA-CCTATTAAAAGC-TTTAATTTGG-TTGTCTAGTGTCAAATCTTCATC  992
      || |||||||||||| |||||||||| |||||||||||||||||||||||
seq2  GACCCTATTAAAAGCTTTTAATTTGGTTTGTCTAGTGTCAAATCTTCATC  1000

seq1  ACTGAGAACACAC-ATACAAA-TAACAT-ACAGAA-TGAGCAA-GGTTAT  1037
      ||||||||||||| ||||||| || ||| |||||| ||||||| | ||||
seq2  ACTGAGAACACACAATACAAATTATCATAACAGAATTGAGCAATGCTTAT  1050

seq1  T-AAGGAATATT--TTGTATATACATATA-TATTTATGAAT-GCAATAAC  1082
      | ||| ||||||  | | ||||||||||| |||| |||||| ||||| ||
seq2  TAAAGCAATATTTCTGGCATATACATATATTATTGATGAATGGCAATTAC  1100

seq1  TACTAGAAAAAAAGAGGTCAT-GATTTAA  1110
      |||||| |||||||| ||||| |||||||
seq2  TACTAG-AAAAAAGAAGTCATGGATTTAA  1128