BAC Information

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BAC

Clone NameB6Ng01-202P18
Chromosome7 (Build37)
Map Location 136,425,752 - 136,517,639
singlet/doubletdoublet
Overlap genePpapdc1a
Upstream geneBC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144
Downstream geneBrwd2, LOC100043150, Fgfr2, LOC546005
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202P18.bB6Ng01-202P18.g
ACCGA023323GA023324
length1,1521,102
definitionB6Ng01-202P18.b B6Ng01-202P18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,425,752 - 136,426,890)(136,516,535 - 136,517,639)
sequence
gaattcagcccatctctctaggtgcacactgatagctaagtccgggtacc
tcttccacctcttcatgaccgaagcacccgccttgcagagccacagatct
gaaatgtgttttctttgctagaatccttttattttatcttaaataaaaga
tctcttatgaaacaaatataggaaagttatataatacaaagggaaaagtg
gaaaaaatgaaattatttatgatcctatcaccaagaggaaacaagttaac
attttgattatatctttttagctttttcccctcttgcttttataatacag
aatgcttctgcacaaaagatgtgtctccaaatgaagccccccagctgcct
tttctctgacgttgtaccctctccatttgcctgcctttgtggaaggatat
tttccatcaacttgatttttttggaatactgtgatatagtccattaaatt
aaggcaaaaaaatcctagacacagctagctcactggtgctggagaggagg
agactatgtctggctttcccaggatgtagagaacatgatgacaaacatcc
tggaccaccatcactgtgaacatcttgtcctcctttcctcagttccttga
agaggaacttctgtggaaaaggttccttctactcctgccaaactaccctt
taggaaggccagtccattcctctttatcttcacgtaatctgactggttct
cccatctgccctgctccaatgtcccatgtgggcaccctttcacagaatag
tctatgcaatgtttcatgcctgtgtgtctctccatagcattgttctttta
ttttcatgtgtgtgtgtgtatgtgtgtacatgtgtgtctgtgcaacatgc
ttgagatgggccagtgggacagccttgattgtgccttgcttgagacggtg
cctcttgcttgtttgccactgttcacatctgggctagatggccacagact
tccagaaattcccatgtctccacctctaatttccatcccaggatcagtag
ggtattgaggcttcttgctactgtgcctgacttttacatacatcctgagg
gttccaacttgggtagtctgtgtattcagtgaagccattcttcttgacct
cttttccacaccctggggattcggaatggtaaccatctgtctctgagttg
gc
gaattccaagaacctgatttttctgagcaacacgttcactcacaggtata
ctagaatttggaacacatgtatgggtgcacacacacagacacatccattt
accacagatgagaaggaagtgggcatggtgatctacaagaaaaggccttg
tgccttttcctttcagagactgcaagctttcttggctagaagcagttaac
tgtaaatgttaacatgaggatctgcctgacagcagcaaagatgctcttag
ttaggaagaaagcaagctcttagctaggtagaaggcaaaagtgaaagtgt
ctcaccttctctcaaaaaaatgagcactcacttgttttcaatgacaaagg
caaggggaatggtccaggaggtgtaccgagccatccagtgacagggctgt
ctgcctcccaactgatactgggtagcaataactcattcctctccctgaaa
tccagataaatgagcagagatgtgtagctcttctctggcaaagtaaagta
tgtttactgagccctcttaggtacatactgtggcttgccttttctcctca
gatgactcttaaaccaactctcactttaaagatttaagtagtgagaaaac
tggcactgaagattcttcaaaaaacaatttgttcttcttataagtgagaa
gcacaatcctaagctttgggtgaaagctcggagacttcagatagctaaag
ccaacttgagtaaaaagggcaatactgaaggcatcattcaaagacctgat
tcaaagagcaatacaaacaaagccagcatggtgttggaacaaaaatggac
acattggtcaatggaatagaacagaggatccacattaaacatacacacag
ctagctacagtcacaagatctttgacaaaggtgtcaaaacttccactgaa
ttacaaacaatctctgagaaatggtgaggaagcttgttctctccacagag
agaacactagatcctcatttctcacccattcaaaccattcaattcaatac
attcggatagagacatcatcaaaggtagatcaagatcctcaatataagat
ctgaacctattaggagaaaacacttggaagaatacagaatagataagagc
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136425752_136426890
seq2: B6Ng01-202P18.b_50_1201

seq1  GAATTCAGCCCATCTCTCTAGGTGCACACTGATAGCTAAGTCCGGGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCATCTCTCTAGGTGCACACTGATAGCTAAGTCCGGGTACC  50

seq1  TCTTCCACCTCTTCATGACCGAAGCACCCGCCTTGCAGAGCCACAGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACCTCTTCATGACCGAAGCACCCGCCTTGCAGAGCCACAGATCT  100

seq1  GAAATGTGTTTTCTTTGCTAGAATCCTTTTATTTTATCTTAAATAAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGTTTTCTTTGCTAGAATCCTTTTATTTTATCTTAAATAAAAGA  150

seq1  TCTCTTATGAAACAAATATAGGAAAGTTATATAATACAAAGGGAAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATGAAACAAATATAGGAAAGTTATATAATACAAAGGGAAAAGTG  200

seq1  GAAAAAATGAAATTATTTATGATCCTATCACCAAGAGGAAACAAGTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATGAAATTATTTATGATCCTATCACCAAGAGGAAACAAGTTAAC  250

seq1  ATTTTGATTATATCTTTTTAGCTTTTTCCCCTCTTGCTTTTATAATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATTATATCTTTTTAGCTTTTTCCCCTCTTGCTTTTATAATACAG  300

seq1  AATGCTTCTGCACAAAAGATGTGTCTCCAAATGAAGCCCCCCAGCTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTCTGCACAAAAGATGTGTCTCCAAATGAAGCCCCCCAGCTGCCT  350

seq1  TTTCTCTGACGTTGTACCCTCTCCATTTGCCTGCCTTTGTGGAAGGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGACGTTGTACCCTCTCCATTTGCCTGCCTTTGTGGAAGGATAT  400

seq1  TTTCCATCAACTTGATTTTTTTGGAATACTGTGATATAGTCCATTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCAACTTGATTTTTTTGGAATACTGTGATATAGTCCATTAAATT  450

seq1  AAGGCAAAAAAATCCTAGACACAGCTAGCTCACTGGTGCTGGAGAGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAAAAAATCCTAGACACAGCTAGCTCACTGGTGCTGGAGAGGAGG  500

seq1  AGACTATGTCTGGCTTTCCCAGGATGTAGAGAACATGATGACAAACATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTCTGGCTTTCCCAGGATGTAGAGAACATGATGACAAACATCC  550

seq1  TGGACCACCATCACTGTGAACATCTTGTCCTCCTTTCCTCAGTTCCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCACCATCACTGTGAACATCTTGTCCTCCTTTCCTCAGTTCCTTGA  600

seq1  AGAGGAACTTCTGTGGAAAAGGTTCCTTCTACTCCTGCCAAACTACCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAACTTCTGTGGAAAAGGTTCCTTCTACTCCTGCCAAACTACCCTT  650

seq1  TAGGAAGGCCAGTCCATTCCTCTTTATCTTCACGTAATCTGACTGGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGGCCAGTCCATTCCTCTTTATCTTCACGTAATCTGACTGGTTCT  700

seq1  CCCATCTGCCCTGCTCCAATGTCCCATGTGGGCACCCTTTCACAGAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTGCCCTGCTCCAATGTCCCATGTGGGCACCCTTTCACAGAATAG  750

seq1  TCTATGCAATGTTTCATGCCTGTGTGTCTCTCCATAGCATTGTTCTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCAATGTTTCATGCCTGTGTGTCTCTCCATAGCATTGTTCTTTTA  800

seq1  TTTTCATGTGTGTGTGTGTATGTGTGTACATGTGTGTCTGTGCAACATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGTGTGTGTGTGTATGTGTGTACATGTGTGTCTGTGCAACATGC  850

seq1  TTGAGAT-GGCCAGT-GGACAGCCTTGATTGTGCCTTGCTTGAGACGGTG  898
      ||||||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGAGATGGGCCAGTGGGACAGCCTTGATTGTGCCTTGCTTGAGACGGTG  900

seq1  CCTCTTGCTTGTTTGCCACTGTTCACATCT-GGCTAGATGGCCACAGACT  947
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTCTTGCTTGTTTGCCACTGTTCACATCTGGGCTAGATGGCCACAGACT  950

seq1  TCCAGAAATTCCCATGTCTCCACCTCTAATTT-CATCCCAGGATCAGTAG  996
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCCAGAAATTCCCATGTCTCCACCTCTAATTTCCATCCCAGGATCAGTAG  1000

seq1  GGTATTG-GGC-TCCTGCTACTGTGCCTGACTTTTACATACATCCTGAGG  1044
      ||||||| ||| || |||||||||||||||||||||||||||||||||||
seq2  GGTATTGAGGCTTCTTGCTACTGTGCCTGACTTTTACATACATCCTGAGG  1050

seq1  GTTCAAACTTGGTAAGTCTGTGTATCCAGTG-AGCCAT--CTCCTGAACT  1091
      |||| |||||||  ||||||||||| ||||| ||||||   || ||| ||
seq2  GTTCCAACTTGGGTAGTCTGTGTATTCAGTGAAGCCATTCTTCTTGACCT  1100

seq1  CTTTTCCACA-CCTGGG--ATCTGAAAGGAAACCATCTGTCTCT-AGTTG  1137
      |||||||||| ||||||   || ||| || |||||||||||||| |||||
seq2  CTTTTCCACACCCTGGGGATTCGGAATGGTAACCATCTGTCTCTGAGTTG  1150

seq1  GC  1139
      ||
seq2  GC  1152

seq1: chr7_136516535_136517639
seq2: B6Ng01-202P18.g_67_1168 (reverse)

seq1  AAGCTCTTATCTATTCCTGTA-TCTT-CAAGTGTTTTCTCCTAATAGTTT  48
      ||||||||||||||| ||||| |||| |||||||||||||||||||| ||
seq2  AAGCTCTTATCTATT-CTGTATTCTTCCAAGTGTTTTCTCCTAATAGGTT  49

seq1  CAGATCTTATATTGA-GATCTTTGATCTA-CTTTGAATTGATGTCTCTAT  96
      ||||||||||||||| |||| |||||||| ||||||  ||||||||||||
seq2  CAGATCTTATATTGAGGATC-TTGATCTACCTTTGA--TGATGTCTCTAT  96

seq1  CGAATTGTATTGAATTGAATGGGTTTGAATGGGTGAGAAATGAGGATCTA  146
      |  | ||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCGAATGTATTGAATTGAAT-GGTTTGAATGGGTGAGAAATGAGGATCTA  145

seq1  GTGTTCTTCTCTGTGGAGAGAAC-AGCTTTCCCTCACCATTTCTCAGAGA  195
      |||||| |||||||||||||||| |||||  |||||||||||||||||||
seq2  GTGTTC-TCTCTGTGGAGAGAACAAGCTT--CCTCACCATTTCTCAGAGA  192

seq1  TTGTTTGTAATTCAGTGGAAGTTTTGACACCTTTGTCAAAGATCTTGTGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTAATTCAGTGGAAGTTTTGACACCTTTGTCAAAGATCTTGTGA  242

seq1  CTGTAGCTAGCTGTGTGTATGTTTAATGTGGATCCTCTGTTCTATTCCAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTAGCTGTGTGTATGTTTAATGTGGATCCTCTGTTCTATTCCAT  292

seq1  TGACCAATGTGTCCATTTTTGTTCCAACACCATGCTGGCTTTGTTTGTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAATGTGTCCATTTTTGTTCCAACACCATGCTGGCTTTGTTTGTAT  342

seq1  TGCTCTTTGAATCAGGTCTTTGAATGATGCCTTCAGTATTGCCCTTTTTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTGAATCAGGTCTTTGAATGATGCCTTCAGTATTGCCCTTTTTA  392

seq1  CTCAAGTTGGCTTTAGCTATCTGAAGTCTCCGAGCTTTCACCCAAAGCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTTGGCTTTAGCTATCTGAAGTCTCCGAGCTTTCACCCAAAGCTT  442

seq1  AGGATTGTGCTTCTCACTTATAAGAAGAACAAATTGTTTTTTGAAGAATC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTGCTTCTCACTTATAAGAAGAACAAATTGTTTTTTGAAGAATC  492

seq1  TTCAGTGCCAGTTTTCTCACTACTTAAATCTTTAAAGTGAGAGTTGGTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCCAGTTTTCTCACTACTTAAATCTTTAAAGTGAGAGTTGGTTT  542

seq1  AAGAGTCATCTGAGGAGAAAAGGCAAGCCACAGTATGTACCTAAGAGGGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCATCTGAGGAGAAAAGGCAAGCCACAGTATGTACCTAAGAGGGC  592

seq1  TCAGTAAACATACTTTACTTTGCCAGAGAAGAGCTACACATCTCTGCTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAACATACTTTACTTTGCCAGAGAAGAGCTACACATCTCTGCTCA  642

seq1  TTTATCTGGATTTCAGGGAGAGGAATGAGTTATTGCTACCCAGTATCAGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGGATTTCAGGGAGAGGAATGAGTTATTGCTACCCAGTATCAGT  692

seq1  TGGGAGGCAGACAGCCCTGTCACTGGATGGCTCGGTACACCTCCTGGACC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGACAGCCCTGTCACTGGATGGCTCGGTACACCTCCTGGACC  742

seq1  ATTCCCCTTGCCTTTGTCATTGAAAACAAGTGAGTGCTCATTTTTTTGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTTGCCTTTGTCATTGAAAACAAGTGAGTGCTCATTTTTTTGAG  792

seq1  AGAAGGTGAGACACTTTCACTTTTGCCTTCTACCTAGCTAAGAGCTTGCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGAGACACTTTCACTTTTGCCTTCTACCTAGCTAAGAGCTTGCT  842

seq1  TTCTTCCTAACTAAGAGCATCTTTGCTGCTGTCAGGCAGATCCTCATGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTAACTAAGAGCATCTTTGCTGCTGTCAGGCAGATCCTCATGTT  892

seq1  AACATTTACAGTTAACTGCTTCTAGCCAAGAAAGCTTGCAGTCTCTGAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTACAGTTAACTGCTTCTAGCCAAGAAAGCTTGCAGTCTCTGAAA  942

seq1  GGAAAAGGCACAAGGCCTTTTCTTGTAGATCACCATGCCCACTTCCTTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGCACAAGGCCTTTTCTTGTAGATCACCATGCCCACTTCCTTCT  992

seq1  CATCTGTGGTAAATGGATGTGTCTGTGTGTGTGCACCCATACATGTGTTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGGTAAATGGATGTGTCTGTGTGTGTGCACCCATACATGTGTTC  1042

seq1  CAAATTCTAGTATACCTGTGAGTGAACGTGTTGCTCAGAAAAATCAGGTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTAGTATACCTGTGAGTGAACGTGTTGCTCAGAAAAATCAGGTT  1092

seq1  CTTGGAATTC  1105
      ||||||||||
seq2  CTTGGAATTC  1102