BAC Information

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BAC

Clone NameB6Ng01-203A14
Chromosome7 (Build37)
Map Location 25,099,758 - 25,226,725
singlet/doubletdoublet
Overlap geneZfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1
Upstream geneNlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691
Downstream genePlaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A14.bB6Ng01-203A14.g
ACCGA023363GA023364
length893738
definitionB6Ng01-203A14.b B6Ng01-203A14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,225,834 - 25,226,725)(25,099,758 - 25,100,488)
sequence
gaattcacatttggggagaaggaaaccacatgtggcaatcgactataaaa
gggcagccatcttgtagcttccaaatcctgtcgctttctccttgatttcc
ttttcttctcttttctcattactacttggcctcatcttattttcattatc
tatatcttttaaaaatataagggctaaggctggagagatggctcagcagt
taagagcactggctgctcttccagaggtcccgagttcaagtcccagcaac
cacatggtggttcataaccatccctaatgagatctgatgccctcttctgg
tgtttctgaagacagctacagtgtacttatatataataaataaaattaaa
tcaaatcaatcattcatatatatatatatatgctagagagatggcgcaga
ggttaaaagccctggctgctgttcaagaggacatgagttcaattcccagc
ccccacatggcagctcacacctgtctgtaactccagttccagggggtctt
aaacattcacacagacatacatgcaggcaaaacaacaacaacacacacaa
ataaataaattaatgaaaatataagttccacaaaacaaggatcaacctgg
gctacatagtgagtctcaaggcagcctgagatgtagagtcctatccacta
ctgtgtccggcctagaacagaatctggtggccataaggcagccagtgttc
gaatgaataagagaaactctggaggatgatttcatgttggcgcgcgcgcg
cacacacacacacacacacacacacacacaccctgtatttccagcaccca
gaaagtgccagtgagaggaagaacgtccaaggtcatcttcagctacatgg
ttcaaggtcagcctggcctacaagagatctttgtcaaaagggg
gaattcaggaggcagaggctggaggatctctgtgggtttgaagccagcct
gattaacagcaaattttaggacagccagggttacacggaaaaactatctc
agggggaaataaaaacaaaaggtaaagagcccacgtgataatagatctcc
agggagaggtacttgtcaccaagtgatggcctgagttcagtctctaggac
tgactcttcctgagaggtctcctccatcctgcacatgctcagtgttgcat
gtgagtatgcacgcgtgtacacacacacaaattgtcattgtgaaaacaaa
ttattaaagaaaagcaggagaacctgaatttgaatcccagcactcatgta
caaagcattcagaagcatatatgtatcaacacatgcatgtaatggtacac
atatatgacccatacaaaaagtcttagaaagaaaaagcgagaataaaaca
gacttgtattttaaaaggctacgccttaacaggaggaaatacacttggct
tgatgcacctagatatgcttggtcaacagaccaccacttcctccttcctc
ccctgaatctgtaatgggggtagggttagaggtaaggggctacacttgat
caaaccatcttttttttccttttttgttttttgggtttttttggcttttt
gttttgttttgttttttcaagacagggttttctcttgtgcagccctggct
gtccctggaactcacttctgtagacccaggcttggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25225834_25226725
seq2: B6Ng01-203A14.b_46_938 (reverse)

seq1  CCCCCTTTGAC-AAGATCTCTTGTAGGCCAGGCTGACCTTGAACCATGTA  49
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTGACAAAGATCTCTTGTAGGCCAGGCTGACCTTGAACCATGTA  50

seq1  GCTGAAGATGACCTTGGACGTTCTTCCTCTCACTGGCACCTTCTGGGTGC  99
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTGAAGATGACCTTGGACGTTCTTCCTCTCACTGGCACTTTCTGGGTGC  100

seq1  TGGAAATACAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATACAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGC  150

seq1  GCGCCAACATGAAATCATCCTCCAGAGTTTCTCTTATTCATTCGAACACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCAACATGAAATCATCCTCCAGAGTTTCTCTTATTCATTCGAACACT  200

seq1  GGCTGCCTTATGGCCACCAGATTCTGTTCTAGGCCGGACACAGTAGTGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTTATGGCCACCAGATTCTGTTCTAGGCCGGACACAGTAGTGGA  250

seq1  TAGGACTCTACATCTCAGGCTGCCTTGAGACTCACTATGTAGCCCAGGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTCTACATCTCAGGCTGCCTTGAGACTCACTATGTAGCCCAGGTT  300

seq1  GATCCTTGTTTTGTGGAACTTATATTTTCATTAATTTATTTATTTGTGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGTTTTGTGGAACTTATATTTTCATTAATTTATTTATTTGTGTG  350

seq1  TGTTGTTGTTGTTTTGCCTGCATGTATGTCTGTGTGAATGTTTAAGACCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTTTGCCTGCATGTATGTCTGTGTGAATGTTTAAGACCC  400

seq1  CCTGGAACTGGAGTTACAGACAGGTGTGAGCTGCCATGTGGGGGCTGGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTGGAGTTACAGACAGGTGTGAGCTGCCATGTGGGGGCTGGGA  450

seq1  ATTGAACTCATGTCCTCTTGAACAGCAGCCAGGGCTTTTAACCTCTGCGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTCATGTCCTCTTGAACAGCAGCCAGGGCTTTTAACCTCTGCGC  500

seq1  CATCTCTCTAGCATATATATATATATATGAATGATTGATTTGATTTAATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTAGCATATATATATATATATGAATGATTGATTTGATTTAATT  550

seq1  TTATTTATTATATATAAGTACACTGTAGCTGTCTTCAGAAACACCAGAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTATATATAAGTACACTGTAGCTGTCTTCAGAAACACCAGAAG  600

seq1  AGGGCATCAGATCTCATTAGGGATGGTTATGAACCACCATGTGGTTGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCAGATCTCATTAGGGATGGTTATGAACCACCATGTGGTTGCTG  650

seq1  GGACTTGAACTCGGGACCTCTGGAAGAGCAGCCAGTGCTCTTAACTGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGAACTCGGGACCTCTGGAAGAGCAGCCAGTGCTCTTAACTGCTG  700

seq1  AGCCATCTCTCCAGCCTTAGCCCTTATATTTTTAAAAGATATAGATAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCTCCAGCCTTAGCCCTTATATTTTTAAAAGATATAGATAATG  750

seq1  AAAATAAGATGAGGCCAAGTAGTAATGAGAAAAGAGAAGAAAAGGAAATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGATGAGGCCAAGTAGTAATGAGAAAAGAGAAGAAAAGGAAATC  800

seq1  AAGGAGAAAGCGACAGGATTTGGAAGCTACAAGATGGCTGCCCTTTTATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAAGCGACAGGATTTGGAAGCTACAAGATGGCTGCCCTTTTATA  850

seq1  GTCGATTGCCACATGTGGTTTCCTTCTCCCCAAATGTGAATTC  892
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATTGCCACATGTGGTTTCCTTCTCCCCAAATGTGAATTC  893

seq1: chr7_25099758_25100488
seq2: B6Ng01-203A14.g_65_802

seq1  GAATTCAGGAGGCAGAGGCTGGAGGATCTCTGTGGGTTTGAAGCCAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGGCAGAGGCTGGAGGATCTCTGTGGGTTTGAAGCCAGCCT  50

seq1  GATTAACAGCAAATTTTAGGACAGCCAGGGTTACACGGAAAAACTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACAGCAAATTTTAGGACAGCCAGGGTTACACGGAAAAACTATCTC  100

seq1  AGGGGGAAATAAAAACAAAAGGTAAAGAGCCCACGTGATAATAGATCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAATAAAAACAAAAGGTAAAGAGCCCACGTGATAATAGATCTCC  150

seq1  AGGGAGAGGTACTTGTCACCAAGTGATGGCCTGAGTTCAGTCTCTAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGGTACTTGTCACCAAGTGATGGCCTGAGTTCAGTCTCTAGGAC  200

seq1  TGACTCTTCCTGAGAGGTCTCCTCCATCCTGCACATGCTCAGTGTTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTCCTGAGAGGTCTCCTCCATCCTGCACATGCTCAGTGTTGCAT  250

seq1  GTGAGTATGCACGCGTGTACACACACACAAATTGTCATTGTGAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTATGCACGCGTGTACACACACACAAATTGTCATTGTGAAAACAAA  300

seq1  TTATTAAAGAAAAGCAGGAGAACCTGAATTTGAATCCCAGCACTCATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAGAAAAGCAGGAGAACCTGAATTTGAATCCCAGCACTCATGTA  350

seq1  CAAAGCATTCAGAAGCATATATGTATCAACACATGCATGTAATGGTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATTCAGAAGCATATATGTATCAACACATGCATGTAATGGTACAC  400

seq1  ATATATGACCCATACAAAAAGTCTTAGAAAGAAAAAGCGAGAATAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGACCCATACAAAAAGTCTTAGAAAGAAAAAGCGAGAATAAAACA  450

seq1  GACTTGTATTTTAAAAGGCTACGCCTTAACAGGAGGAAATACACTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTATTTTAAAAGGCTACGCCTTAACAGGAGGAAATACACTTGGCT  500

seq1  TGATGCACCTAGATATGCTTGGTCAACAGACCACCACTTCCTCCTTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCACCTAGATATGCTTGGTCAACAGACCACCACTTCCTCCTTCCTC  550

seq1  CCCTGAATCTGTAATGGGGGTAGGGTTAGAGGTAAGGGGCTACACTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATCTGTAATGGGGGTAGGGTTAGAGGTAAGGGGCTACACTTGAT  600

seq1  CAAACCATCTTTTTTTTCCTTTTTTGTTTTTTGGGTTTTTTTGGCTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATCTTTTTTTTCCTTTTTTGTTTTTTGGGTTTTTTTGGCTTTTT  650

seq1  GTTTTGTTTTG-TTTTTCAAGACAGGG-TTTCTC-TGTGCAGCCCTGGCT  697
      ||||||||||| ||||||||||||||| |||||| |||||||||||||||
seq2  GTTTTGTTTTGTTTTTTCAAGACAGGGTTTTCTCTTGTGCAGCCCTGGCT  700

seq1  GT-CCTGGAACTCAC-TCTGTAGA-CCAGGC-TGGCCT  731
      || |||||||||||| |||||||| |||||| ||||||
seq2  GTCCCTGGAACTCACTTCTGTAGACCCAGGCTTGGCCT  738