BAC Information

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BAC

Clone NameB6Ng01-203A19
Chromosome7 (Build37)
Map Location 70,342,351 - 70,446,269
singlet/doubletdoublet
Overlap geneChrna7
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A19.bB6Ng01-203A19.g
ACCGA023373GA023374
length907723
definitionB6Ng01-203A19.b B6Ng01-203A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,342,351 - 70,343,255)(70,445,547 - 70,446,269)
sequence
gaattctagcccagaatgtgtgtgcaaggaagactttcaggcactaaaga
tgacaccttttctttccacagcctctaaatggatgttggctgctggagcc
cacatgctggcagctaatcagtgcaagccagaattgagaatgtgctcaca
gatccttcagataatacctataatttttacatacattttctagaacaaac
aaattttctacttggcttagaagactacacaccacgttattgaaaagccc
aaagaaaaccagcagtaggtacacaggcacagtgtgtctcaaacaccaga
accgttgactagaggctggcaatgccatgattctttggtatgtgcgtgtg
tgtctatgtatgtatgtatgtatatatgtatttacttattattatgtgta
tgtgtgttttgcctataggattgtcatttgtgtgtgtgtctcattttgag
ccactgtttaggttatagggattgaactgttcctcctgaagacccttaac
tactgagcccctaggttactccagggtctgtgaatgattctaatgtatca
tgagttttaagagaaacttgtaatagaaaaaatacatttaaaaaaaagga
aaatgttgaaagtaaaaaatcaataaatgggaaaaacaatgagacaggaa
gaggatctgtgactgaacatgagtcatgagagccagcatcttgtgaagaa
acttgaagaaacagaagaatgcaaaatacaggaaaaaatactgagttggg
agtacagcagtcactcagtctggccacttctgacgcctggaccccaggtc
cattcttgatgcatccagctaattctccacactcagaagtgtcattgtct
ccttataatatctaaaaagcttcaagacacagctagacatcaccttaggt
gacaaaa
gaattcagagctccagacactgggcgccagtactttatttctggcctgta
tgatttgtctttctgataagaatttgttgatattcagcctatgtttctct
acacttaatgtttctttagctactttcgagatttttcttggcagttttca
aaaccttacactgccccaacagaagcatgtctttaattgacctcagaccc
aatcaagttgataaccaatattaaccattatgcggtgcaaacaggaacct
tacttaccagttcgagtgactttaaaattgtgcatacttgtgttttatct
caagatggtgtctgccttggtggaatatctgtttatggcatgttttgcat
atgtaggttatcttattggttaattgtgctggtcagggcacctgtgccct
ttcttgttttctggcaagtggatatccaagtcacagggcagtggtgctgc
gctccctaggaatcactgtgggtgacatttaggagcattacatctgcctg
gggcacaggtcttttattttcatagcaagtcactttctctttttaggcat
tttctttccatttgagcaaacctattagatgtcatatcactttccagttc
ccattttaataagaattttaataaggccattgatgtgtacattatgcatg
catatatatactatatattatatatgtatgtatatatatatactatatta
tatatgtatgtatatagatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70342351_70343255
seq2: B6Ng01-203A19.b_45_951

seq1  GAATTCTAGCCCAGAATGTGTGTGCAAGGAAGACTTTCAGGCACTAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCCCAGAATGTGTGTGCAAGGAAGACTTTCAGGCACTAAAGA  50

seq1  TGACACCTTTTCTTTCCACAGCCTCTAAATGGATGTTGGCTGCTGGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCTTTTCTTTCCACAGCCTCTAAATGGATGTTGGCTGCTGGAGCC  100

seq1  CACATGCTGGCAGCTAATCAGTGCAAGCCAGAATTGAGAATGTGCTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTGGCAGCTAATCAGTGCAAGCCAGAATTGAGAATGTGCTCACA  150

seq1  GATCCTTCAGATAATACCTATAATTTTTACATACATTTTCTAGAACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTCAGATAATACCTATAATTTTTACATACATTTTCTAGAACAAAC  200

seq1  AAATTTTCTACTTGGCTTAGAAGACTACACACCACGTTATTGAAAAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTACTTGGCTTAGAAGACTACACACCACGTTATTGAAAAGCCC  250

seq1  AAAGAAAACCAGCAGTAGGTACACAGGCACAGTGTGTCTCAAACACCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACCAGCAGTAGGTACACAGGCACAGTGTGTCTCAAACACCAGA  300

seq1  ACCGTTGACTAGAGGCTGGCAATGCCATGATTCTTTGGTATGTGCGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTGACTAGAGGCTGGCAATGCCATGATTCTTTGGTATGTGCGTGTG  350

seq1  TGTCTATGTATGTATGTATGTATATATGTATTTACTTATTATTATGTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATGTATGTATGTATGTATATATGTATTTACTTATTATTATGTGTA  400

seq1  TGTGTGTTTTGCCTATAGGATTGTCATTTGTGTGTGTGTCTCATTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTTGCCTATAGGATTGTCATTTGTGTGTGTGTCTCATTTTGAG  450

seq1  CCACTGTTTAGGTTATAGGGATTGAACTGTTCCTCCTGAAGACCCTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTTTAGGTTATAGGGATTGAACTGTTCCTCCTGAAGACCCTTAAC  500

seq1  TACTGAGCCCCTAGGTTACTCCAGGGTCTGTGAATGATTCTAATGTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGCCCCTAGGTTACTCCAGGGTCTGTGAATGATTCTAATGTATCA  550

seq1  TGAGTTTTAAGAGAAACTTGTAATAGAAAAAATACATTTAAAAAAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTAAGAGAAACTTGTAATAGAAAAAATACATTTAAAAAAAAGGA  600

seq1  AAATGTTGAAAGTAAAAAATCAATAAATGGGAAAAACAATGAGACAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGAAAGTAAAAAATCAATAAATGGGAAAAACAATGAGACAGGAA  650

seq1  GAGGATCTGTGACTGAACATGAGTCATGAGAGCCAGCAGC-TGTGAAGAA  699
      |||||||||||||||||||||||||||||||||||||| | |||||||||
seq2  GAGGATCTGTGACTGAACATGAGTCATGAGAGCCAGCATCTTGTGAAGAA  700

seq1  ACTTGAAGAAACAGAAGAATGCAAAATACAGGAAAAAATACTGAGTTGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGAAACAGAAGAATGCAAAATACAGGAAAAAATACTGAGTTGGG  750

seq1  AGTACAGCAGTCACTCAGTCTGGCCACTTCTGACGCCTGGA-CCCAGGTC  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTACAGCAGTCACTCAGTCTGGCCACTTCTGACGCCTGGACCCCAGGTC  800

seq1  CATTCTTGATGCATCCAGCTAATTTTCCACACTCAGAAATGTCAGTAGCA  848
      |||||||||||||||||||||||| ||||||||||||| ||||| |  | 
seq2  CATTCTTGATGCATCCAGCTAATTCTCCACACTCAGAAGTGTCATTGTCT  850

seq1  CCCTATAACAACCAAAAAGGCTTCAAGACACAGCTAGACATCACC-TAGG  897
      || ||||| | | ||||| |||||||||||||||||||||||||| ||||
seq2  CCTTATAATATCTAAAAA-GCTTCAAGACACAGCTAGACATCACCTTAGG  899

seq1  TGACAAAA  905
      ||||||||
seq2  TGACAAAA  907

seq1: chr7_70445547_70446269
seq2: B6Ng01-203A19.g_62_784 (reverse)

seq1  ATACATATATATACATACATATATAATATAGTATATATATATACATACAT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTATATACATACATATATAATATAGTATATATATATACATACAT  50

seq1  ATATAATATATAGTATATATATGCATGCATAATGTACACATCAATGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATATAGTATATATATGCATGCATAATGTACACATCAATGGCCT  100

seq1  TATTAAAATTCTTATTAAAATGGGAACTGGAAAGTGATATGACATCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTCTTATTAAAATGGGAACTGGAAAGTGATATGACATCTAAT  150

seq1  AGGTTTGCTCAAATGGAAAGAAAATGCCTAAAAAGAGAAAGTGACTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGCTCAAATGGAAAGAAAATGCCTAAAAAGAGAAAGTGACTTGCT  200

seq1  ATGAAAATAAAAGACCTGTGCCCCAGGCAGATGTAATGCTCCTAAATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATAAAAGACCTGTGCCCCAGGCAGATGTAATGCTCCTAAATGTC  250

seq1  ACCCACAGTGATTCCTAGGGAGCGCAGCACCACTGCCCTGTGACTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGTGATTCCTAGGGAGCGCAGCACCACTGCCCTGTGACTTGGAT  300

seq1  ATCCACTTGCCAGAAAACAAGAAAGGGCACAGGTGCCCTGACCAGCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTGCCAGAAAACAAGAAAGGGCACAGGTGCCCTGACCAGCACAA  350

seq1  TTAACCAATAAGATAACCTACATATGCAAAACATGCCATAAACAGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCAATAAGATAACCTACATATGCAAAACATGCCATAAACAGATATT  400

seq1  CCACCAAGGCAGACACCATCTTGAGATAAAACACAAGTATGCACAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAGGCAGACACCATCTTGAGATAAAACACAAGTATGCACAATTTT  450

seq1  AAAGTCACTCGAACTGGTAAGTAAGGTTCCTGTTTGCACCGCATAATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACTCGAACTGGTAAGTAAGGTTCCTGTTTGCACCGCATAATGGT  500

seq1  TAATATTGGTTATCAACTTGATTGGGTCTGAGGTCAATTAAAGACATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTGGTTATCAACTTGATTGGGTCTGAGGTCAATTAAAGACATGCT  550

seq1  TCTGTTGGGGCAGTGTAAGGTTTTGAAAACTGCCAAGAAAAATCTCGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGGGCAGTGTAAGGTTTTGAAAACTGCCAAGAAAAATCTCGAAA  600

seq1  GTAGCTAAAGAAACATTAAGTGTAGAGAAACATAGGCTGAATATCAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAAAGAAACATTAAGTGTAGAGAAACATAGGCTGAATATCAACAA  650

seq1  ATTCTTATCAGAAAGACAAATCATACAGGCCAGAAATAAAGTACTGGCGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATCAGAAAGACAAATCATACAGGCCAGAAATAAAGTACTGGCGC  700

seq1  CCAGTGTCTGGAGCTCTGAATTC  723
      |||||||||||||||||||||||
seq2  CCAGTGTCTGGAGCTCTGAATTC  723