BAC Information

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BAC

Clone NameB6Ng01-203G11
Chromosome7 (Build37)
Map Location 33,175,341 - 33,296,165
singlet/doubletdoublet
Overlap geneEG384589, EG668393, EG330689, LOC100043362
Upstream geneLOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneLOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203G11.bB6Ng01-203G11.g
ACCGA023629GA023630
length4311,124
definitionB6Ng01-203G11.b B6Ng01-203G11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,295,729 - 33,296,165)(33,175,341 - 33,176,403)
sequence
ttctgtgagatgtaagaacactgactttcatccatgctcatttatatgcc
acaaaaccattcacaacagcacggttttataggttattttaaaattctag
tacaatccaatatcatgttgtttagttttttgttcaaattgttttatatt
tgtcaattgggagcttgttcatgcttcctcatgccagtttccacagaaaa
ttctacatgtctgtacatatgtttgtttacttgtgtatgtgcctgtgtat
ggacagtggtgctaagatgtatgtgtttttttgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtacatgtgaaggtcagaaaacaatttgaaggagtttatt
ctcttcctttatcaggtggtttctgagatttgaactctggtcttcacctt
caatcactgcacctttaatcactgagcaatc
gaattctcacctgaggaatactgaatggctaagaagcacctgaaaaaatg
ttgagcatgctcaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagcactcttaagataaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagagaaagactcctccaatgttgttt
ggattgcaagctcgtacaaacactctggaaatcagtcatgctgttcctca
gaaaattggacatagaactaccatagaaccccacaatacccctgctgggc
atatatccagaagatgttccaaatggtaagaaggacatgtgcttcaccat
gttcatagcagccttatttataatgtccagaagctggaaagaacacagat
atctctcaaaagaggcatatatgcctcagtacaagggaatgccagggcca
agatgtaggagtgggtgactaggggactgggcaggcgggtatgggtgact
ttttggatggcattggaaatataaatgatgaaaatatataataacatttt
gaaaaaaaatgaacatgaatgaaagactgtgttcttacaacttacagaag
aattccagaggatctgtagatgttacttctgggaattgatttccctccag
tcaaaagacccaagacaaggtaatgtatttgggaaagaggttaatttgct
tcatgatctgaaatgttgaaagtcaagatagggcaaactcaggttgccag
ggacttgtaaagtctgatcccagggtacacagcagaaggttacctgggga
ttgtagaagacagagcagagactccacgctgcttctcaagcacccatgat
atgctcactgaccaggcctgccacaatggggatcagtactcaatgtgggt
attggtgtgttcctcatacatgttaatgcataggtggcccttccttcgga
cattttttttttttatgcagactgggtatttaggagacaattacccagac
aggtggagaaaaaagtgttttaggcaatgagggcagagcatattgaaggg
ccctggttttgctgtgtcacacttaacgagaaaggtggccatacctagta
ccaatgttctctcaatgacacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33295729_33296165
seq2: B6Ng01-203G11.b_44_480 (reverse)

seq1  GATAGCTCAGTGATTAAAGGTGCAGTGATTGAAGGTGAAGACCTGAGTTC  50
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATTGCTCAGTGATTAAAGGTGCAGTGATTGAAGGTGAAGACCAGAGTTC  50

seq1  AAATCTCAGAAACCACCTGATAAAGGAAGAGAATAAACTCCTTCAAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAGAAACCACCTGATAAAGGAAGAGAATAAACTCCTTCAAATTG  100

seq1  TTTTCTGACCTTCACATGTACACACACACACACACACACACACACACAAA  150
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTTCTGACCTTCACATGTACACACACACACACACACACACACACACACA  150

seq1  AAAAAACACATACATCTTAGCACCACTGTCCATACACAGGCACATACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACATACATCTTAGCACCACTGTCCATACACAGGCACATACACA  200

seq1  AGTAAACAAACATATGTACAGACATGTAGAATTTTCTGTGGAAACTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAAACATATGTACAGACATGTAGAATTTTCTGTGGAAACTGGCA  250

seq1  TGAGGAAGCATGAACAAGCTCCCAATTGACAAATATAAAACAATTTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGCATGAACAAGCTCCCAATTGACAAATATAAAACAATTTGAAC  300

seq1  AAAAAACTAAACAACATGATATTGGATTGTACTAGAATTTTAAAATAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTAAACAACATGATATTGGATTGTACTAGAATTTTAAAATAACC  350

seq1  TATAAAACCGTGCTGTTGTGAATGGTTTTGTGGCATATAAATGAGCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACCGTGCTGTTGTGAATGGTTTTGTGGCATATAAATGAGCATGG  400

seq1  ATGAAAGTCAGTGTTCTTACATCTCACAGAAGAATTC  437
      |||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGTCAGTGTTCTTACATCTCACAGAAGAATTC  437

seq1: chr7_33175341_33176403
seq2: B6Ng01-203G11.g_124_1188

seq1  CTCAATCATCAGGGAAATGCAAATCAAAACAATCCTGAGATTCCACCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATCATCAGGGAAATGCAAATCAAAACAATCCTGAGATTCCACCTCA  50

seq1  CACCAGTCAGCACTCTTAAGATAAAAAATTCAGGTGACAGCAGATGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTCAGCACTCTTAAGATAAAAAATTCAGGTGACAGCAGATGCTGG  100

seq1  TGAGGATGTGGAGAAAGAGAAAGACTCCTCCAATGTTGTTTGGATTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGTGGAGAAAGAGAAAGACTCCTCCAATGTTGTTTGGATTGCAA  150

seq1  GCTCGTACAAACACTCTGGAAATCAGTCATGCTGTTCCTCAGAAAATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTACAAACACTCTGGAAATCAGTCATGCTGTTCCTCAGAAAATTGG  200

seq1  ACATAGAACTACCATAGAACCCCACAATACCCCTGCTGGGCATATATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAACTACCATAGAACCCCACAATACCCCTGCTGGGCATATATCCA  250

seq1  GAAGATGTTCCAAATGGTAAGAAGGACATGTGCTTCACCATGTTCATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTTCCAAATGGTAAGAAGGACATGTGCTTCACCATGTTCATAGC  300

seq1  AGCCTTATTTATAATGTCCAGAAGCTGGAAAGAACACAGATATCTCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTATTTATAATGTCCAGAAGCTGGAAAGAACACAGATATCTCTCAA  350

seq1  AAGAGGCATATATGCCTCAGTACAAGGGAATGCCAGGGCCAAGATGTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCATATATGCCTCAGTACAAGGGAATGCCAGGGCCAAGATGTAGG  400

seq1  AGTGGGTGACTAGGGGACTGGGCAGGCGGGTATGGGTGACTTTTTGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGACTAGGGGACTGGGCAGGCGGGTATGGGTGACTTTTTGGATG  450

seq1  GCATTGGAAATATAAATGATGAAAATATATAATAACATTTTGAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGAAATATAAATGATGAAAATATATAATAACATTTTGAAAAAAAA  500

seq1  TGAACATGAATGAAAGACTGTGTTCTTACAACTTACAGAAGAATTCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGAATGAAAGACTGTGTTCTTACAACTTACAGAAGAATTCCAGA  550

seq1  GGATCTGTAGATGTTACTTCTGGGAATTGATTTCCCTCCAGTCAAAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTAGATGTTACTTCTGGGAATTGATTTCCCTCCAGTCAAAAGAC  600

seq1  CCAAGACAAGGTAATGTATTTGGGAAAGAGGTTAATTTGCTTCATGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACAAGGTAATGTATTTGGGAAAGAGGTTAATTTGCTTCATGATCT  650

seq1  GAAATGTTGAAAGTCAAGATAGGGCAAACTCAGGTTGCCAGGGACTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTGAAAGTCAAGATAGGGCAAACTCAGGTTGCCAGGGACTTGTA  700

seq1  AAGTCTGATCCCAGGGTACACAGCAGAAGGTTACCTGGGGATTGTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGATCCCAGGGTACACAGCAGAAGGTTACCTGGGGATTGTAGAAG  750

seq1  ACAGAGCAGAGACTCCACGCTGCTTCTCAAGCACCCATGATATGCTCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAGAGACTCCACGCTGCTTCTCAAGCACCCATGATATGCTCACT  800

seq1  GACCAGGCCTGCCACAATGGGGATCAGTACTCAATGTGGGTATTGGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCCTGCCACAATGGGGATCAGTACTCAATGTGGGTATTGGTGTG  850

seq1  TTCCTCATACATGTTAATGCATAGGTGGCCCTTCCTTCGGACA--TTTTT  898
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TTCCTCATACATGTTAATGCATAGGTGGCCCTTCCTTCGGACATTTTTTT  900

seq1  TTTTTATGCAGACTGGGTATTTAGGAGACAAATTACCCAGACAGGTGGAG  948
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTTATGCAGACTGGGTATTTAGGAGAC-AATTACCCAGACAGGTGGAG  949

seq1  -AAAAAGTGTTTTAGGCAATGAGGGCAGAGCATA-TGAA-GGCCCTGGTT  995
       ||||||||||||||||||||||||||||||||| |||| |||||||| |
seq2  AAAAAAGTGTTTTAGGCAATGAGGGCAGAGCATATTGAAGGGCCCTGG-T  998

seq1  TTTGCTTGTGTCACACTTACAGAGAAAGGGTGCCATACCTAGTACAAAGT  1045
      ||||| |||||||||||||  ||||||||  |||||||||||||| ||  
seq2  TTTGC-TGTGTCACACTTAACGAGAAAGGTGGCCATACCTAGTACCAATG  1047

seq1  CTCTGCAAATGACACAGT  1063
       |||   |||||||||||
seq2  TTCTCTCAATGACACAGT  1065