BAC Information

Click to search

BAC

Clone NameB6Ng01-203H23
Chromosome7 (Build37)
Map Location 124,665,854 - 124,789,701
singlet/doubletdoublet
Overlap geneXylt1
Upstream geneNucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203H23.bB6Ng01-203H23.g
ACCGA023693GA023694
length6331,113
definitionB6Ng01-203H23.b B6Ng01-203H23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,665,854 - 124,666,486)(124,788,583 - 124,789,701)
sequence
gaattctccccctgtcatctggaattttcctacaaggctccccacagtgt
gcatttaaacttcaatctcatctcattaacagaaaggctgggcatccaga
ttccattcctgctgcctgggaccagctttgaaatgaggctgaaaaggtca
atccaagaggatgtgcagggtctggggtggggggtgggggctttcctgtg
actggtctttcgatggcatttcggagaacttagggtcacaatcagttgac
tcacaggccacttttgctaagtcctgtctgtcttccagtagccagcgaaa
ccttctcaggagtccccattcagcaatgtcagtggggacaaacccatccc
tctttctttgaccccccatcagtgaggtttccatgacgacttgtagacac
actattacagagacctcagttaggaagccgcaagatacagggacactcga
aattcatggaaggtgatttgagccactctctctgcagtactacagtaatg
aaaacaaccttagtttaaagtcagtgaagtttggaggtttgttctgtgag
ctcttttgagcagattaatggatggacggggatggatgggaatttggctg
ttaatgtctggggtaaagtctctcttgctctcc
gaattcactgggaatgcccaaggtatgtttctcccatcccttatttaaat
aaagtgagctttgggaaaatagagcaacatacagttttgggtttctagtt
gccttggaaaagcagatgatttgatagtcaacctcaagttgacatcttaa
ccacattgggcaagagttgagcctggaaccacaagtggtctaggctggaa
tgcacagtgcctgcctcatgcagggctcatcctgacttgcaggtgcatgg
acctcaggcagtctctgttagtgtgaacaacgccccctgtgggactcaca
ccaactcacaagtagtagtatttgctggagcctgagttaaggttttgtag
taacattattggcatctcaatccctacatggtggatcagaagtagcttct
attttcttgttctcctatgtttgaatctgctatatcacacatttctgcaa
aagaacatgcattactttataatgagaaactgaatcaataagcactgttt
tacgaaaggttgcaccacagcctagaactacacagagtgcatgaactgcc
cagatccggtgaaaggcacttgctatttccctagatgccccacgggtagc
aattcattctcctcggccttttcgggataagggtcctttgtcctgattta
ttcccagtctccgattcataaatacatgggtttgcccatggcaaggcaca
atagctccatcacaataaaaaatgaaggagaaaagccaaaggattctggg
cctgaggcaactagatggcttgcttcgtttcaaagcaagtaccaggagga
agtttcaacaaccctaaataatcgggagtgtctcttggaatttcctataa
gatcatttatcttataggttttaggaggctcgtgattaaagctggaagga
cagttgctggccaagtttgggacactgtgctctgcatcagtggtttcaag
attgatactcttcccacagactggacagggggaaagatattcactgacat
tgatactagtgtaacaaccacatgtgatggcctgttggagtgatgttcct
tagcttgggagaaagagttggggggtgtctgactctcttgaccaaagagg
gttggtaaagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124665854_124666486
seq2: B6Ng01-203H23.b_42_674

seq1  GAATTCTCCCCCTGTCATCTGGAATTTTCCTACAAGGCTCCCCACAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCCTGTCATCTGGAATTTTCCTACAAGGCTCCCCACAGTGT  50

seq1  GCATTTAAACTTCAATCTCATCTCATTAACAGAAAGGCTGGGCATCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAACTTCAATCTCATCTCATTAACAGAAAGGCTGGGCATCCAGA  100

seq1  TTCCATTCCTGCTGCCTGGGACCAGCTTTGAAATGAGGCTGAAAAGGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCCTGCTGCCTGGGACCAGCTTTGAAATGAGGCTGAAAAGGTCA  150

seq1  ATCCAAGAGGATGTGCAGGGTCTGGGGTGGGGGGTGGGGGCTTTCCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGAGGATGTGCAGGGTCTGGGGTGGGGGGTGGGGGCTTTCCTGTG  200

seq1  ACTGGTCTTTCGATGGCATTTCGGAGAACTTAGGGTCACAATCAGTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCTTTCGATGGCATTTCGGAGAACTTAGGGTCACAATCAGTTGAC  250

seq1  TCACAGGCCACTTTTGCTAAGTCCTGTCTGTCTTCCAGTAGCCAGCGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGCCACTTTTGCTAAGTCCTGTCTGTCTTCCAGTAGCCAGCGAAA  300

seq1  CCTTCTCAGGAGTCCCCATTCAGCAATGTCAGTGGGGACAAACCCATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCAGGAGTCCCCATTCAGCAATGTCAGTGGGGACAAACCCATCCC  350

seq1  TCTTTCTTTGACCCCCCATCAGTGAGGTTTCCATGACGACTTGTAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTGACCCCCCATCAGTGAGGTTTCCATGACGACTTGTAGACAC  400

seq1  ACTATTACAGAGACCTCAGTTAGGAAGCCGCAAGATACAGGGACACTCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTACAGAGACCTCAGTTAGGAAGCCGCAAGATACAGGGACACTCGA  450

seq1  AATTCATGGAAGGTGATTTGAGCCACTCTCTCTGCAGTACTACAGTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGGAAGGTGATTTGAGCCACTCTCTCTGCAGTACTACAGTAATG  500

seq1  AAAACAACCTTAGTTTAAAGTCAGTGAAGTTTGGAGGTTTGTTCTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACCTTAGTTTAAAGTCAGTGAAGTTTGGAGGTTTGTTCTGTGAG  550

seq1  CTCTTTTGAGCAGATTAATGGATGGACGGGGATGGATGGGAATTTGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGAGCAGATTAATGGATGGACGGGGATGGATGGGAATTTGGCTG  600

seq1  TCAATGTCTGGGGTGAAGTCTCTCTTGCTCTCC  633
      | |||||||||||| ||||||||||||||||||
seq2  TTAATGTCTGGGGTAAAGTCTCTCTTGCTCTCC  633

seq1: chr7_124788583_124789701
seq2: B6Ng01-203H23.g_65_1177 (reverse)

seq1  GAGCTTTTACCCAACCCCTCTCTGGGGTC-AGAGAGTCCAGACACCCCC-  48
      |||||||   ||||||   ||||  |||| ||||||| ||||||||||| 
seq2  GAGCTTT--ACCAACC---CTCTTTGGTCAAGAGAGT-CAGACACCCCCC  44

seq1  -AC-CTCTCTCCCAAGCCTAAGGGACATCACCTCCAACAGGCCCATCACA  96
       || || ||||||||| |||||| |||||| |||||||||| ||||||||
seq2  AACTCTTTCTCCCAAG-CTAAGGAACATCA-CTCCAACAGG-CCATCACA  91

seq1  TGTGGTTGTACCACCTAGTATCAATGTCAGTGAATATCTTTCCCCCTGTC  146
      |||||||||  || ||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGTTACA-CTAGTATCAATGTCAGTGAATATCTTTCCCCCTGTC  140

seq1  CAGTCTGTGGGAAGAGTATCAATCTTGAAACCACTGATGCAGAGCACAGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTGGGAAGAGTATCAATCTTGAAACCACTGATGCAGAGCACAGT  190

seq1  GTCCCAAACTTGGCCAGCAACTGTCCTTCCAGC-TTAATCACGAGCCTCC  245
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTCCCAAACTTGGCCAGCAACTGTCCTTCCAGCTTTAATCACGAGCCTCC  240

seq1  TAAAACCTATAAGATAAATGATCTTATAGGAAATTCCAAGAGACACTCCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTATAAGATAAATGATCTTATAGGAAATTCCAAGAGACACTCCC  290

seq1  GATTTATTTAGGGTTGTTGAAACTTCCTCCTGGTACTTGCTTTGAAACGA  345
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-TTATTTAGGGTTGTTGAAACTTCCTCCTGGTACTTGCTTTGAAACGA  339

seq1  AGCAAGCCATCTAGTTGCCTCAGGCCCAGAATCCTTTGGCTTTTCTCCTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCATCTAGTTGCCTCAGGCCCAGAATCCTTTGGCTTTTCTCCTT  389

seq1  CATTTTTTATTGTGATGGAGCTATTGTGCCTTGCCATGGGCAAACCCATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTATTGTGATGGAGCTATTGTGCCTTGCCATGGGCAAACCCATG  439

seq1  TATTTATGAATCGGAGACTGGGAATAAATCAGGACAAAGGACCCTTATCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGAATCGGAGACTGGGAATAAATCAGGACAAAGGACCCTTATCC  489

seq1  CGAAAAGGCCGAGGAGAATGAATTGCTACCCGTGGGGCATCTAGGGAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAGGCCGAGGAGAATGAATTGCTACCCGTGGGGCATCTAGGGAAAT  539

seq1  AGCAAGTGCCTTTCACCGGATCTGGGCAGTTCATGCACTCTGTGTAGTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTGCCTTTCACCGGATCTGGGCAGTTCATGCACTCTGTGTAGTTC  589

seq1  TAGGCTGTGGTGCAACCTTTCGTAAAACAGTGCTTATTGATTCAGTTTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGTGGTGCAACCTTTCGTAAAACAGTGCTTATTGATTCAGTTTCT  639

seq1  CATTATAAAGTAATGCATGTTCTTTTGCAGAAATGTGTGATATAGCAGAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAAGTAATGCATGTTCTTTTGCAGAAATGTGTGATATAGCAGAT  689

seq1  TCAAACATAGGAGAACAAGAAAATAGAAGCTACTTCTGATCCACCATGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATAGGAGAACAAGAAAATAGAAGCTACTTCTGATCCACCATGTA  739

seq1  GGGATTGAGATGCCAATAATGTTACTACAAAACCTTAACTCAGGCTCCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGAGATGCCAATAATGTTACTACAAAACCTTAACTCAGGCTCCAG  789

seq1  CAAATACTACTACTTGTGAGTTGGTGTGAGTCCCACAGGGGGCGTTGTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTACTACTTGTGAGTTGGTGTGAGTCCCACAGGGGGCGTTGTTC  839

seq1  ACACTAACAGAGACTGCCTGAGGTCCATGCACCTGCAAGTCAGGATGAGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAACAGAGACTGCCTGAGGTCCATGCACCTGCAAGTCAGGATGAGC  889

seq1  CCTGCATGAGGCAGGCACTGTGCATTCCAGCCTAGACCACTTGTGGTTCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGAGGCAGGCACTGTGCATTCCAGCCTAGACCACTTGTGGTTCC  939

seq1  AGGCTCAACTCTTGCCCAATGTGGTTAAGATGTCAACTTGAGGTTGACTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAACTCTTGCCCAATGTGGTTAAGATGTCAACTTGAGGTTGACTA  989

seq1  TCAAATCATCTGCTTTTCCAAGGCAACTAGAAACCCAAAACTGTATGTTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCATCTGCTTTTCCAAGGCAACTAGAAACCCAAAACTGTATGTTG  1039

seq1  CTCTATTTTCCCAAAGCTCACTTTATTTAAATAAGGGATGGGAGAAACAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTTCCCAAAGCTCACTTTATTTAAATAAGGGATGGGAGAAACAT  1089

seq1  ACCTTGGGCATTCCCAGTGAATTC  1119
      ||||||||||||||||||||||||
seq2  ACCTTGGGCATTCCCAGTGAATTC  1113