BAC Information

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BAC

Clone NameB6Ng01-204A23
Chromosome7 (Build37)
Map Location 129,821,705 - 129,932,468
singlet/doubletdoublet
Overlap geneCacng3
Upstream geneUsp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486
Downstream gene4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204A23.bB6Ng01-204A23.g
ACCGA024108GA024109
length411772
definitionB6Ng01-204A23.b B6Ng01-204A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,932,052 - 129,932,468)(129,821,705 - 129,822,473)
sequence
ttgtagatcaggctggcctcaaactgacagatatctgactacttgttccc
caagtgctggggttaaatgtgtgccatcacacaggggccctaacattaca
ttcttacagaaagtaactgaggacaatctctctctctctctctctctctc
tctctctctctctctctctctcacacacacacacacaaacacacggaagg
ggaggtgggcagctccctccagtttgggatggtgactgttgtaagctgct
ggttaataatcttttgaccactgtgtccctgaaaatcttgagaaatctta
gtttctctttagtgtcttcagtctggaagtgggataagagaggatatata
ggaccgaccatctgtgtggtactggtgtttaggttaacacttaaatgttt
atcttgtccag
gaattcttactgttgagttgagtaaaacttgacatcagccaactaagtac
atgaggagaaatgtgcttgtaatagtttgaaagttatactttgcaatatg
gaagcacttccgaatgaaaacagtgtttaacagaagctttaaaaaaagac
tcaggattgatttcttttcccttgccctggacactctaagagacacattc
ttctactagaaacaatctcatctttagtaacagctccaagagtatggtgc
aacagcagaggtctggggtcttacctgggtcccatccttcagtgggtgtg
gaatcttggggatggctaaacctctggttgtctccttgccaggtgtatcg
ctgtgcaaatgctatcaccaaaacgatgccagacagaagcaacttaaggg
agaaaaggcttattttggagcacagtttcagagcattcgatctgtcagtc
attgcttggccctggcatttggggaaaacactggagcagtgaaaacaaat
ggcagagaacaattgtgcacattacagctgacaggaaataacgtggcagg
aaccaggaactagtgagtgccttcaaaggcctcctctagtgaactagttc
tgcaagccaaagatctaaacacaccaaggactctccaaatggtgcatcct
gctgcagatcaaacattcagaatatgttcagacgcatttcagatttgaaa
tgtggtacctaaaagcagcaagtctcattcaaacctcttcctttgcaggt
ctctgttggttctgttaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_129932052_129932468
seq2: B6Ng01-204A23.b_48_464 (reverse)

seq1  CTGGACATGCTAACCATTTAAGTGTTCACCTAAACACCAGTACCACACAG  50
      ||||||| | ||| |||||||||||| |||||||||||||||||||||||
seq2  CTGGACAAGATAAACATTTAAGTGTTAACCTAAACACCAGTACCACACAG  50

seq1  ATGGTCGGTCCTATATATCCTCTCTTATCCCACTTCCAGACTGAAGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCGGTCCTATATATCCTCTCTTATCCCACTTCCAGACTGAAGACAC  100

seq1  TAAAGAGAAACTAAGATTTCTCAAGATTTTCAGGGACACAGTGGTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGAAACTAAGATTTCTCAAGATTTTCAGGGACACAGTGGTCAAAA  150

seq1  GATTATTAACCAGCAGCTTACAACAGTCACCATCCCAAACTGGAGGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTAACCAGCAGCTTACAACAGTCACCATCCCAAACTGGAGGGAGC  200

seq1  TGCCCACCTCCCCTTCCGTGTGTTTGTGTGTGTGTGTGTGAGAGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCTCCCCTTCCGTGTGTTTGTGTGTGTGTGTGTGAGAGAGAGAG  250

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTCCTCAGTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTCCTCAGTTACT  300

seq1  TTCTGTAAGAATGTAATGTTAGGGCCCCTGTGTGATGGCACACATTTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGAATGTAATGTTAGGGCCCCTGTGTGATGGCACACATTTAAC  350

seq1  CCCAGCACTTGGGGAACAAGTAGTCAGATATCTGTCAGTTTGAGGCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTTGGGGAACAAGTAGTCAGATATCTGTCAGTTTGAGGCCAGC  400

seq1  CTGATCTACAAGAATTC  417
      |||||||||||||||||
seq2  CTGATCTACAAGAATTC  417

seq1: chr7_129821705_129822473
seq2: B6Ng01-204A23.g_65_836

seq1  GAATTCTTACTGTTGAGTTGAGTAAAACTTGACATCAGCCAACTAAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTGTTGAGTTGAGTAAAACTTGACATCAGCCAACTAAGTAC  50

seq1  ATGAGGAGAAATGTGCTTGTAATAGTTTGAAAGTTATACTTTGCAATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAGAAATGTGCTTGTAATAGTTTGAAAGTTATACTTTGCAATATG  100

seq1  GAAGCACTTCCGAATGAAAACAGTGTTTAACAGAAGCTTTAAAAAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTTCCGAATGAAAACAGTGTTTAACAGAAGCTTTAAAAAAAGAC  150

seq1  TCAGGATTGATTTCTTTTCCCTTGCCCTGGACACTCTAAGAGACACATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTGATTTCTTTTCCCTTGCCCTGGACACTCTAAGAGACACATTC  200

seq1  TTCTACTAGAAACAATCTCATCTTTAGTAACAGCTCCAAGAGTATGGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTAGAAACAATCTCATCTTTAGTAACAGCTCCAAGAGTATGGTGC  250

seq1  AACAGCAGAGGTCTGGGGTCTTACCTGGGTCCCATCCTTCAGTGGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGAGGTCTGGGGTCTTACCTGGGTCCCATCCTTCAGTGGGTGTG  300

seq1  GAATCTTGGGGATGGCTAAACCTCTGGTTGTCTCCTTGCCAGGTGTATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTGGGGATGGCTAAACCTCTGGTTGTCTCCTTGCCAGGTGTATCG  350

seq1  CTGTGCAAATGCTATCACCAAAACGATGCCAGACAGAAGCAACTTAAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAAATGCTATCACCAAAACGATGCCAGACAGAAGCAACTTAAGGG  400

seq1  AGAAAAGGCTTATTTTGGAGCACAGTTTCAGAGCATTCGATCTGTCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGCTTATTTTGGAGCACAGTTTCAGAGCATTCGATCTGTCAGTC  450

seq1  ATTGCTTGGCCCTGGCATTTGGGGAAAACACTGGAGCAGTGAAAACAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTGGCCCTGGCATTTGGGGAAAACACTGGAGCAGTGAAAACAAAT  500

seq1  GGCAGAGAACAATTGTGCACATTACAGCTGACAGGAAATAACGTGGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAACAATTGTGCACATTACAGCTGACAGGAAATAACGTGGCAGG  550

seq1  AACCAGGAACTAGTGAGTGCCTTCAAAGGCCTCCTCTAGTGAACTAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGAACTAGTGAGTGCCTTCAAAGGCCTCCTCTAGTGAACTAGTTC  600

seq1  TGCAAGCCAAAGATCTAAACACACCAAGGACTCTCCAAATGGTGCATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCCAAAGATCTAAACACACCAAGGACTCTCCAAATGGTGCATCCT  650

seq1  GCTGCAGATCAAACATTCAGAATATGTTCAGACGCATTTCAGATTTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGATCAAACATTCAGAATATGTTCAGACGCATTTCAGATTTGAAA  700

seq1  TGTGGTACCTAAAAGCAGCAAGCCTCTTTC-AACCTCTTCCTTTGCA-GT  748
      |||||||||||||||||||||| ||| ||| |||||||||||||||| ||
seq2  TGTGGTACCTAAAAGCAGCAAGTCTCATTCAAACCTCTTCCTTTGCAGGT  750

seq1  TTCTG-TGGTTCTGTTAATAAT  769
       |||| |||||||||||||| |
seq2  CTCTGTTGGTTCTGTTAATATT  772