BAC Information

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BAC

Clone NameB6Ng01-204D15
Chromosome7 (Build37)
Map Location 134,648,576 - 134,776,746
singlet/doubletdoublet
Overlap gene1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629
Upstream geneEif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1
Downstream geneBcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204D15.bB6Ng01-204D15.g
ACCGA024230GA024231
length893665
definitionB6Ng01-204D15.b B6Ng01-204D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,648,576 - 134,649,454)(134,776,080 - 134,776,746)
sequence
gaattcttaatactattaatctgtctctaatactgatttttttttttaca
ttatttaaaaatagagaggggctgcctggcagtggtagcacacaccatta
atctcagcatttgggaagtagaggcagatctctgcgtttgaggctagcct
ggtctacagaatgagtttcaaggcagaaattctgccaggtactcactccc
cccaccccaccccccaaaaaaaaaccagagtacttgctcttacagaggat
cagagttcagttcccagcaagtgtcatatatggtgactgacaacttataa
ctccagttccaagggatctgacaatcacatgcaagtacacacccaactat
gagcacacactctaatcttaggggaaaaaatctatatggagttgaacatg
gcgatgcatgcctgtaacctcaatatttactgttgttgcaatgaagagta
ggaggattactgtaagcttgaggaaaattctagctaccctacagaaatct
tttcaaaagactagggttggcagtaggtatagggccatacacccatctct
atactcacaggtaaggtaaggatggtgaattctcttaagccccagtctac
agagcaacagtcaatgtcaaacaagaaagctgtacagaatattatgttta
aattttgggtatagcagtatagcttaatggcacattacaacctttgattt
tttttccctagtgaccaagacgcacacacacacactctcacactcacaca
cgtttatgttttttgtatggaccaaattatccggggatggttgccgcatg
ccttttactcacaacatgtcgggagtgcgtagccggcgaattttctgatt
gagaggacccctcatgatctatgtatctagttccaggatgcct
gaattccaaaatagaccaacaaacaaatgacttgtgattggcatgggatg
gcatggtgtgagcccagcaggacagagttaagtcacagctcatcatagca
ggtatcgttagctaaggtgcttgctacatctctgaacttcaattctttgt
attgttttggttttgatgttttgtttgagacagggtctctccatgtaacc
cttgctgtcctggaactcactctatagaccaggctagcctagaactcgca
gagatcccttagcctctgcctcctgagtgctgggattaatggttgtgtgc
caccatgcctggctaggtttggggactgttttgttttgttctgttttgat
aagagtttctctgtgtagccttggctgtcctggaattcactgtgtagtgg
gataagctggtctccagatctcagatttcagcctgccttttgcctctgcc
tctgcctctagaatgtgatatgaaaggtgtgtgccaccactctgggtaga
acttcaatttccataagctaggggcagcctgtcaggggctagggctgtag
ctaattagcattttcctaacattctgagttacagcaccgcagcataagtg
tgtggcgtggggtggcagtgaagtaggcttgaattcagaggttgtggctg
agatgagaacttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134648576_134649454
seq2: B6Ng01-204D15.b_40_927

seq1  GAATTCTTAATACTATTAATCTGTCTCTAATACTGATTTTTTTTTTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATACTATTAATCTGTCTCTAATACTGATTTTTTTTTTTACA  50

seq1  TTATTTAAAAATAGAGAGGGGCTGCCTGGCAGTGGTAGCACACACCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAAAATAGAGAGGGGCTGCCTGGCAGTGGTAGCACACACCATTA  100

seq1  ATCTCAGCATTTGGGAAGTAGAGGCAGATCTCTGCGTTTGAGGCTAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCATTTGGGAAGTAGAGGCAGATCTCTGCGTTTGAGGCTAGCCT  150

seq1  GGTCTACAGAATGAGTTTCAAGGCAGAAATTCTGCCAGGTACTCACTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACAGAATGAGTTTCAAGGCAGAAATTCTGCCAGGTACTCACTCCC  200

seq1  CCCACCCCACCCCCCAAAAAAAAACCAGAGTACTTGCTCTTACAGAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCACCCCCCAAAAAAAAACCAGAGTACTTGCTCTTACAGAGGAT  250

seq1  CAGAGTTCAGTTCCCAGCAAGTGTCATATATGGTGACTGACAACTTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCAGTTCCCAGCAAGTGTCATATATGGTGACTGACAACTTATAA  300

seq1  CTCCAGTTCCAAGGGATCTGACAATCACATGCAAGTACACACACAACTAT  350
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCCAGTTCCAAGGGATCTGACAATCACATGCAAGTACACACCCAACTAT  350

seq1  GAGCACACACTCAAATCTTAGGGGAAAAAATCTATATGGAGTTGAACATG  400
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAGCACACACTCTAATCTTAGGGGAAAAAATCTATATGGAGTTGAACATG  400

seq1  GTGATGCATGCCTGTAACCTCAATATTTACTGTTGTTGCAGTGAAGAGTA  450
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCGATGCATGCCTGTAACCTCAATATTTACTGTTGTTGCAATGAAGAGTA  450

seq1  GGAGGATTACTGTAAGCTTGAGGAAAATTCTAGCTACCCTACAGAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATTACTGTAAGCTTGAGGAAAATTCTAGCTACCCTACAGAAATCT  500

seq1  TTTCAAAAGACTAGGGTTGGCAGTAGGTATGGTGCCATACACCCATCTCT  550
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  TTTCAAAAGACTAGGGTTGGCAGTAGGTATAGGGCCATACACCCATCTCT  550

seq1  ATACTCACAGGTAAGGTAAGGATGGTGAATTCTCAGAAGCCCCAGTCTAC  600
      ||||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  ATACTCACAGGTAAGGTAAGGATGGTGAATTCTCTTAAGCCCCAGTCTAC  600

seq1  AGAGCAACAGTCAATGTCAAA-AAGAAAGCTGTACAGAATATTATGTTT-  648
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  AGAGCAACAGTCAATGTCAAACAAGAAAGCTGTACAGAATATTATGTTTA  650

seq1  AATTTTGGGTATAGCAGTATAGCTTAATGGTACAGTACAACCTTTGATTT  698
      |||||||||||||||||||||||||||||| ||| |||||||||||||||
seq2  AATTTTGGGTATAGCAGTATAGCTTAATGGCACATTACAACCTTTGATTT  700

seq1  TTTTTCCCTAG-CACCAACACACACACACACACACACACACACACACACA  747
      |||||||||||  ||||| || ||||||||||||| | ||||| ||||||
seq2  TTTTTCCCTAGTGACCAAGACGCACACACACACACTCTCACACTCACACA  750

seq1  CGTTTATTTTTTTTTAATGCTACAAATTAGCCGGGCATGG-TGGCGCATG  796
      ||||||| ||||||  |||   ||||||| ||||| |||| || ||||||
seq2  CGTTTATGTTTTTTGTATGGACCAAATTATCCGGGGATGGTTGCCGCATG  800

seq1  CC-TTTAATCCCAACA-CTCGGGAGGCAGAGGCAGGCGAA-TTTCTGAGT  843
      || |||| || |||||  |||||||   |  || |||||| ||||||| |
seq2  CCTTTTACTCACAACATGTCGGGAGTGCGTAGCCGGCGAATTTTCTGATT  850

seq1  TTGAGG--CCAGCCTGGTCTACAAAGTGAGTTCCAGGA  879
        ||||  ||  | || ||||   |   ||||||||||
seq2  GAGAGGACCCCTCATGATCTATGTATCTAGTTCCAGGA  888

seq1: chr7_134776080_134776746
seq2: B6Ng01-204D15.g_66_730 (reverse)

seq1  TTGAAGTTCTCATCTTCCTGCCACAACCTCTGAATTCAAGCCTACCTCAC  50
      |||||||||||||||  | |||||||||||||||||||||||||| ||||
seq2  TTGAAGTTCTCATCT--CAGCCACAACCTCTGAATTCAAGCCTACTTCAC  48

seq1  TGCCACCCCACCCCACACACTTATGCTGCGGTGCTGTAACTCAGAATGTT  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCCCACGCCACACACTTATGCTGCGGTGCTGTAACTCAGAATGTT  98

seq1  AGGAAAATGCTAATTAGCTACAGCCCTAGCCCCTGACAGGCTGCCCCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATGCTAATTAGCTACAGCCCTAGCCCCTGACAGGCTGCCCCTAG  148

seq1  CTTATGGAAATTGAAGTTCTACCCAGTGTGGTGGCACACACCTTTCATCT  200
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  CTTATGGAAATTGAAGTTCTACCCAGAGTGGTGGCACACACCTTTCATAT  198

seq1  CACATTCTAGAGGCAGAGGCAGAGGCAAAAGGCAGGCTGAAATCTGCGAG  250
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  CACATTCTAGAGGCAGAGGCAGAGGCAAAAGGCAGGCTGAAATCTGAGAT  248

seq1  CTGGAGACCAGCTTATCCCACTACACAGTGAATTCCAGGACAGCCAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACCAGCTTATCCCACTACACAGTGAATTCCAGGACAGCCAAGGC  298

seq1  TACACAGAGAAACTCTTATCAAAACAGAACAAAACAAAACAGTCCCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACTCTTATCAAAACAGAACAAAACAAAACAGTCCCCAAA  348

seq1  CCTAGCCAGGCATGGTGGCACACAACCATTAATCCCAGCACTCAGGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCAGGCATGGTGGCACACAACCATTAATCCCAGCACTCAGGAGGC  398

seq1  AGAGGCTAAGGGATCTCTGCGAGTTCTAGGCTAGCCTGGTCTATAGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTAAGGGATCTCTGCGAGTTCTAGGCTAGCCTGGTCTATAGAGTG  448

seq1  AGTTCCAGGACAGCAAGGGTTACATGGAGAGACCCTGTCTCAAACAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCAAGGGTTACATGGAGAGACCCTGTCTCAAACAAAAC  498

seq1  ATCAAAACCAAAACAATACAAAGAATTGAAGTTCAGAGATGTAGCAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACCAAAACAATACAAAGAATTGAAGTTCAGAGATGTAGCAAGCA  548

seq1  CCTTAGCTAACGATACCTGCTCTGATGAGCTGTGACTTAACTCTGTCCTG  600
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTTAGCTAACGATACCTGCTATGATGAGCTGTGACTTAACTCTGTCCTG  598

seq1  CTGGGCTCACACCATGCCATCCCATGCCAATCACAAGTCATTTGTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCACACCATGCCATCCCATGCCAATCACAAGTCATTTGTTTGTT  648

seq1  GGTCTATTTTGGAATTC  667
      |||||||||||||||||
seq2  GGTCTATTTTGGAATTC  665