BAC Information

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BAC

Clone NameB6Ng01-204D18
Chromosome7 (Build37)
Map Location 62,814,600 - 62,815,718
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622146, Luzp2, LOC668796
Downstream geneSiglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204D18.bB6Ng01-204D18.g
ACCGA024236GA024237
length9681,109
definitionB6Ng01-204D18.b B6Ng01-204D18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatctctgttccgaatttttaatagggttatttggttc
tctggggtccaacttcttgagttctttgtatatattagatactaaccctc
tatcagatgtagggttggtaaaaatcttttcccaatctgttgtttgtgtt
ttttttcctattgagagtgtcttttgccttacagaagctttgaaatttta
tgaggtaccatttgtcgatttttttttttcgagacagggtttctctgtgt
agccctggctgacctggaactcactctgtagaacaggctggcctcgaact
cagaaatccgcctgcctctgcctcccaagtgctgggattaaaggcgtgca
ccaccacgcccggctccatttgtcgattcttgatcttagagcataagtca
ttggtgttctgttcaggaaaatttcccctgtgcccatgtgttcgaggttt
ttccccactttctcttctattagattcagagtacgtgggtttatgtggaa
gtctttgatccacttggacttgagctttgtacagggagataagaacggac
caattttcattcttctacaaggtgacgaacagttgtgccagcaccatttg
ttgaaactgctgtctttttcccactggatggttttagttcctttgtcaaa
agatcatttctgggtcttcaattctattccattgatatttctgcctgtca
ctgtactaataacattcagttcttttttgttgttgttatttttttaatta
ggtattttcttcatttacatttcaaatgctatcccaaaagtccccatacc
aatctcccccctattcccctatccacccaccccacttcttggccctggca
ttcccctgtaccgaggcatataaagttataacatttcagttctttatcac
tattgctctgtaatccagcttgaggtcagggatggtgacctcccctgaag
aacttcctttttattgtt

gaattcatggaaatgaaactgttgtgttccttgactttgtcctttaaatt
ctagctttgtaacgttctgtccaattgtattctgctgcttaattatccta
aacccagtcaataaaactactttaataagagtttctttaatcctagaggt
acccaacaaaatttgaagcttttacaccagtatttccagaaatctctcag
tccaactttgtcaactcattctaatggatatggacaattctgagaatgat
aataacaagtaaatatctttcaagatcttgaccctcactagcagttcaca
tcaaagagaaaaaaaaatgcaaaatgcatttgccacatttggtgctaagc
tatttaaacttaagtgaaagcaaagtttaaaaaaaagccaaaagtaaaat
cctcactcacctttgtataagaaaataaaatgtataaattcatatctgag
gtcaaagagataaatatacaggaataatgaaatacttttactaatacatg
taaaaattataaaactttgtactggtgtaggctttttaaaaagaaattgt
gccgggtggtggtggtgcacgcctttaatcccagcacttgggaggcagag
gcaggtggatttctgagttcgaggccagcctggtctacagagtgagttcc
aggacagccagggctacacagagaaaccctgtcccgaaaaaaaacaaaac
caaaaacaaagaaagaaagaaattgtaaggttgtatctagaaacatttct
aattactctgtaatctgtacatagaaaatacaattaatcactgtagttcc
aataaagcagagttttatatgaagaacttctcacttgttcatcatttaaa
tattaaaactatatggaaatggaattatacaacagtgaaatgctatatta
atgaaatgtatctataaattatagttactatgaatagtgaagaaaatcgg
accatggtattttcttatcatatgaaatcatagatagtatgttcaaataa
tcaatatgcatttttcagaaaaatagatcttttcataaattagtagtaac
taagtaaaatgcacagacgtgaatgagaatatcaggtcatcatgcttacc
aatctactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62814600_62815718
seq2: B6Ng01-204D18.g_65_1173

seq1  GAATTCATGGAAATGAAACTGTTGTGTTCCTTGACTTTGTCCTTTAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGAAATGAAACTGTTGTGTTCCTTGACTTTGTCCTTTAAATT  50

seq1  CTAGCTTTGTAACGTTCTGTCCAATTGTATTCTGCTGCTTAATTATCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTGTAACGTTCTGTCCAATTGTATTCTGCTGCTTAATTATCCTA  100

seq1  AACCCAGTCAATAAAACTACTTTAATAAGAGTTTCTTTAATCCTAGAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTCAATAAAACTACTTTAATAAGAGTTTCTTTAATCCTAGAGGT  150

seq1  ACCCAACAAAATTTGAAGCTTTTACACCAGTATTTCCAGAAATCTCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAAAATTTGAAGCTTTTACACCAGTATTTCCAGAAATCTCTCAG  200

seq1  TCCAACTTTGTCAACTCATTCTAATGGATATGGACAATTCTGAGAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTTGTCAACTCATTCTAATGGATATGGACAATTCTGAGAATGAT  250

seq1  AATAACAAGTAAATATCTTTCAAGATCTTGACCCTCACTAGCAGTTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAGTAAATATCTTTCAAGATCTTGACCCTCACTAGCAGTTCACA  300

seq1  TCAAAGAGAAAAAAAAATGCAAAATGCATTTGCCACATTTGGTGCTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAGAAAAAAAAATGCAAAATGCATTTGCCACATTTGGTGCTAAGC  350

seq1  TATTTAAACTTAAGTGAAAGCAAAGTTTAAAAAAAAGCCAAAAGTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAACTTAAGTGAAAGCAAAGTTTAAAAAAAAGCCAAAAGTAAAAT  400

seq1  CCTCACTCACCTTTGTATAAGAAAATAAAATGTATAAATTCATATCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCACCTTTGTATAAGAAAATAAAATGTATAAATTCATATCTGAG  450

seq1  GTCAAAGAGATAAATATACAGGAATAATGAAATACTTTTACTAATACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAGATAAATATACAGGAATAATGAAATACTTTTACTAATACATG  500

seq1  TAAAAATTATAAAACTTTGTACTGGTGTAGGCTTTTTAAAAAGAAATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTATAAAACTTTGTACTGGTGTAGGCTTTTTAAAAAGAAATTGT  550

seq1  GCCGGGTGGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGTGGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAG  600

seq1  GCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCC  650

seq1  AGGACAGCCAGGGCTACACAGAGAAACCCTGTCCCGAAAAAAAACAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCAGGGCTACACAGAGAAACCCTGTCCCGAAAAAAAACAAAAC  700

seq1  CAAAAACAAAGAAAGAAAGAAATTGTAAGGTTGTATCTAGAAACATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAAGAAAGAAAGAAATTGTAAGGTTGTATCTAGAAACATTTCT  750

seq1  AATTACTCTGTAATCTGTACATAGAAAATACAATTAATCACTGTAGTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTCTGTAATCTGTACATAGAAAATACAATTAATCACTGTAGTTCC  800

seq1  AATAAAGCAGAGTTTTATATGAAGAACTTCTCACTTGTTCATCA-TTAAA  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATAAAGCAGAGTTTTATATGAAGAACTTCTCACTTGTTCATCATTTAAA  850

seq1  TATTAAAACTATATGGAAATGGAATTATACAACAGTGAAATGCTATATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAACTATATGGAAATGGAATTATACAACAGTGAAATGCTATATTA  900

seq1  ATGAAATGTATCTATAAATTATAGTTACTATGAATAGTGAAGAAAATCGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGTATCTATAAATTATAGTTACTATGAATAGTGAAGAAAATCGG  950

seq1  ACCATGGTATTTTCTTATCATATGAAATCATAGAATAGTTATGTTTAAAT  999
      ||||||||||||||||||||||||||||||||| |||| |||||| ||||
seq2  ACCATGGTATTTTCTTATCATATGAAATCATAG-ATAG-TATGTTCAAAT  998

seq1  AATTCAATTATGCATTTTTTCAG-AAAATAGATCTTTTCATAAATTAGTA  1048
      || |||| |||||| |||||||| ||||||||||||||||||||||||||
seq2  AA-TCAA-TATGCA-TTTTTCAGAAAAATAGATCTTTTCATAAATTAGTA  1045

seq1  GTAAATTAAAGGTAAAAATGCACAGGAAGTGATTGGAGGAATATCAAGTC  1098
      |||| |  |||   |||||||||| || |||| ||   |||||||| |||
seq2  GTAACT--AAG--TAAAATGCACA-GACGTGAATG--AGAATATCAGGTC  1088

seq1  ATCATGCTAACAAATCTACTG  1119
      |||||||| || |||||||||
seq2  ATCATGCTTACCAATCTACTG  1109


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