BAC Information

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BAC

Clone NameB6Ng01-204E17
Chromosome7 (Build37)
Map Location 136,449,927 - 136,575,490
singlet/doubletdoublet
Overlap genePpapdc1a
Upstream geneEG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144
Downstream geneBrwd2, LOC100043150, Fgfr2, LOC546005, Ate1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204E17.bB6Ng01-204E17.g
ACCGA024276GA024277
length884992
definitionB6Ng01-204E17.b B6Ng01-204E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,574,616 - 136,575,490)(136,449,927 - 136,450,890)
sequence
gaattctccggccaaatcacaccttcttctctgccctctggcggtgcagg
tgttccaaggttccatcaaggtgggaagagagaacacttaaggatactct
gggggaagagtctcccgatttgccctttccaaggtggttcaaggaaaata
taaggcggaggcatagatggtgctacaatgtaacaccctcaagcccaatg
tgtccatcactttactttttactcagaaattgctgtattgtagctcttaa
cctggatcatgactaaaccggtatagattccacttactagcatttaaaat
taacatttttctgcttgatccaattcctcatatctttattatgtaggttt
ttatgagttcatacaagatgtaagtcctgtcttcagctgctgtttggaca
tatatactaaccttctctctctctctctctctctctctctctctctatat
atatatatatatatatatatatatatattgattgatgtaagtatttttta
ttagatattttctttatttacatttcaaatgctatcccgaaagttcccta
taccctcccgctgccctgctcccctactcacccactcccacatcttggcc
ctggcattcccccgtactgaggcatataaagtttttcaagaccaaagggg
cctcttcttcccaatgatggccgactaggccattcttctgctacatatgc
agcttagagacataagctctgggggtactgggttagttcatattgttgtt
ccaccctatagggttgcagaccccttttagctccttgggtacttttagct
cctcccattgggggccctgtgatccatcaatagacgaactgtgagcaccc
actcagtatttgcctagcactggtcattagcctc
gaattcactgggacgctggtctgtttgatggtattactgtgaagctgctc
agagtgtatgttaagtttggcagtatcagggcttcctagtggggccagct
ctcctaggaggctctcagtccacagtccttgtatactcactgctgaaaac
gtgcatgaacgtgcagacagactaaggtcatatgacacccaagtttagga
tacatagtgaggttccaaggtggacagttctgctagaacctcgctcttgg
atgactgtcccttttttgcctaaaacaaggagaatttctggatccaggac
taaaataggggtgactatgggaagacccaagtttctagatccttttggct
caggatcaaaatttctcagccaggcagtggaagactggaacttcttgatg
ttccagcttccaacaattcatgcttgaaaccattctgaatgaaatttagg
tggaggcagggctggaaatgctgggcaaaggccgttggctgaagtctgat
tcataatattgcctgtctcccaacccccatcacttttttatttaaggctt
gcttttggttgtccaactaatgaagagctagcccaggctggggatgtgct
agattaccatggcaggagtagttctcagagggtaaaaagacgaagaggga
agatgcctagagctagcccattagcagactgaaaacatcccgtcgcctca
cctcatccttccactgccccctagtggaggtgaagcagcatcatgacctc
atctggacaatgggagggagggcggggaaacatcctgttcccctcgttag
gtccagggaacctgctgagtccactcctgttttcagatctttgttctcag
acactgtgctcacagccctggccggggccctggccccaagtgagccgctg
tgtggatacttgagcttttccagctcacgttggggagcctgggtttctta
gagttcttttgccaaagcttgtttccttggcctgtcctcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136574616_136575490
seq2: B6Ng01-204E17.b_44_927 (reverse)

seq1  GAGGCT-ATG-CCAGTGCTAGGCAAATACAGAAGTGGGTGCTCACAG-TC  47
      |||||| ||| |||||||||||||||||| | ||||||||||||||| ||
seq2  GAGGCTAATGACCAGTGCTAGGCAAATACTG-AGTGGGTGCTCACAGTTC  49

seq1  GTCTATTGGATGGATCACAGGGCCCCCAAT-GGAGGAGCT-AAAGTACCC  95
      ||||||| |||||||||||||||||||||| ||||||||| |||||||||
seq2  GTCTATT-GATGGATCACAGGGCCCCCAATGGGAGGAGCTAAAAGTACCC  98

seq1  AAGGAGCT-AAAGGGGTCTGCAACCCTATA-GGTGGAACAACAATATGAA  143
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AAGGAGCTAAAAGGGGTCTGCAACCCTATAGGGTGGAACAACAATATGAA  148

seq1  CTAA-CCAGTACCCCCAGAGCTTATGTCTCT-AGCTGCATATGTAGCAGA  191
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTAACCCAGTACCCCCAGAGCTTATGTCTCTAAGCTGCATATGTAGCAGA  198

seq1  AG-ATGGCCTAGTCGGCCATCATTGGGAAG-AGAGGCCCC-TTGGTCTTG  238
      || ||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  AGAATGGCCTAGTCGGCCATCATTGGGAAGAAGAGGCCCCTTTGGTCTTG  248

seq1  -AAAACTTTATATGCCTCAGTACGGGGGAATGCCAGGGCCAAGATGTGGG  287
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTTATATGCCTCAGTACGGGGGAATGCCAGGGCCAAGATGTGGG  298

seq1  AGTGGGTGAGTAGGGGAGCAGGGCAGCGGGAGGGTATAGGGAACTTTCGG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGAGTAGGGGAGCAGGGCAGCGGGAGGGTATAGGGAACTTTCGG  348

seq1  GATAGCATTTGAAATGTAAATAAAGAAAATATCTAATAAAAAATACTTAC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCATTTGAAATGTAAATAAAGAAAATATCTAATAAAAAATACTTAC  398

seq1  ATCAATCAATATATATATATATATATATATATATATATATAGAGAGAGAG  437
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  ATCAATCAATATATATATATATATATATATATATATATAT--AGAGAGAG  446

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAAGGTTAGTATATATGTCCAAACAGC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAAGGTTAGTATATATGTCCAAACAGC  496

seq1  AGCTGAAGACAGGACTTACATCTTGTATGAACTCATAAAAACCTACATAA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGACAGGACTTACATCTTGTATGAACTCATAAAAACCTACATAA  546

seq1  TAAAGATATGAGGAATTGGATCAAGCAGAAAAATGTTAATTTTAAATGCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATATGAGGAATTGGATCAAGCAGAAAAATGTTAATTTTAAATGCT  596

seq1  AGTAAGTGGAATCTATACCGGTTTAGTCATGATCCAGGTTAAGAGCTACA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTGGAATCTATACCGGTTTAGTCATGATCCAGGTTAAGAGCTACA  646

seq1  ATACAGCAATTTCTGAGTAAAAAGTAAAGTGATGGACACATTGGGCTTGA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCAATTTCTGAGTAAAAAGTAAAGTGATGGACACATTGGGCTTGA  696

seq1  GGGTGTTACATTGTAGCACCATCTATGCCTCCGCCTTATATTTTCCTTGA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTACATTGTAGCACCATCTATGCCTCCGCCTTATATTTTCCTTGA  746

seq1  ACCACCTTGGAAAGGGCAAATCGGGAGACTCTTCCCCCAGAGTATCCTTA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTTGGAAAGGGCAAATCGGGAGACTCTTCCCCCAGAGTATCCTTA  796

seq1  AGTGTTCTCTCTTCCCACCTTGATGGAACCTTGGAACACCTGCACCGCCA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTCTCTTCCCACCTTGATGGAACCTTGGAACACCTGCACCGCCA  846

seq1  GAGGGCAGAGAAGAAGGTGTGATTTGGCCGGAGAATTC  875
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGAGAAGAAGGTGTGATTTGGCCGGAGAATTC  884

seq1: chr7_136449927_136450890
seq2: B6Ng01-204E17.g_68_1044

seq1  GAATTCACTGGGACGCTGGTCTGTTTGATGGTATTACTGTGAAGCTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGGACGCTGGTCTGTTTGATGGTATTACTGTGAAGCTGCTC  50

seq1  AGAGTGTATGTTAAGTTTGGCAGTATCAGGGCTTCCTAGTGGGGCCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTATGTTAAGTTTGGCAGTATCAGGGCTTCCTAGTGGGGCCAGCT  100

seq1  CTCCTAGGAGGCTCTCAGTCCACAGTCCTTGTATACTCACTGCTGAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGGAGGCTCTCAGTCCACAGTCCTTGTATACTCACTGCTGAAAAC  150

seq1  GTGCATGAACGTGCAGACAGACTAAGGTCATATGACACCCAAGTTTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGAACGTGCAGACAGACTAAGGTCATATGACACCCAAGTTTAGGA  200

seq1  TACATAGTGAGGTTCCAAGGTGGACAGTTCTGCTAGAACCTCGCTCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTGAGGTTCCAAGGTGGACAGTTCTGCTAGAACCTCGCTCTTGG  250

seq1  ATGACTGTCCCTTTTTTGCCTAAAACAAGGAGAATTTCTGGATCCAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTCCCTTTTTTGCCTAAAACAAGGAGAATTTCTGGATCCAGGAC  300

seq1  TAAAATAGGGGTGACTATGGGAAGACCCAAGTTTCTAGATCCTTTTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGGGGTGACTATGGGAAGACCCAAGTTTCTAGATCCTTTTGGCT  350

seq1  CAGGATCAAAATTTCTCAGCCAGGCAGTGGAAGACTGGAACTTCTTGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCAAAATTTCTCAGCCAGGCAGTGGAAGACTGGAACTTCTTGATG  400

seq1  TTCCAGCTTCCAACAATTCATGCTTGAAACCATTCTGAATGAAATTTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTTCCAACAATTCATGCTTGAAACCATTCTGAATGAAATTTAGG  450

seq1  TGGAGGCAGGGCTGGAAATGCTGGGCAAAGGCCGTTGGCTGAAGTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGGGCTGGAAATGCTGGGCAAAGGCCGTTGGCTGAAGTCTGAT  500

seq1  TCATAATATTGCCTGTCTCCCAACCCCCATCACTTTTTTATTTAAGGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATATTGCCTGTCTCCCAACCCCCATCACTTTTTTATTTAAGGCTT  550

seq1  GCTTTTGGTTGTCCAACTAATGAAGAGCTAGCCCAGGCTGGGGATGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGGTTGTCCAACTAATGAAGAGCTAGCCCAGGCTGGGGATGTGCT  600

seq1  AGATTACCATGGCAGGAGTAGTTCTCAGAGGGTAAAAAGACGAAGAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACCATGGCAGGAGTAGTTCTCAGAGGGTAAAAAGACGAAGAGGGA  650

seq1  AGATGCCTAGAGCTAGCCCATTAGCAGACTGAAAACATCCCGTCGCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCTAGAGCTAGCCCATTAGCAGACTGAAAACATCCCGTCGCCTCA  700

seq1  CCTCATCCTTCCACTGCCCCCTAGTGGAGGTGAAGCAGCATCATGACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCTTCCACTGCCCCCTAGTGGAGGTGAAGCAGCATCATGACCTC  750

seq1  ATCTGGACAATGGGAGGGAGGGCGGGGAAACATCCTG-TCCCCTCGTTAG  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCTGGACAATGGGAGGGAGGGCGGGGAAACATCCTGTTCCCCTCGTTAG  800

seq1  GTCCAGGGAACCTGCTGAGTCCACTCCTG-TTTCAGATCTTTGTTCTCAG  848
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCCAGGGAACCTGCTGAGTCCACTCCTGTTTTCAGATCTTTGTTCTCAG  850

seq1  ACACTGTGCTCACAG-CCTGGCC-GGGCCCTGGCCCCAAGTGAGCCGCTG  896
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  ACACTGTGCTCACAGCCCTGGCCGGGGCCCTGGCCCCAAGTGAGCCGCTG  900

seq1  TGT-GATACTTGAGCTTT--CAGCTCACGTT-GGGAGCCTGGG-TTCTTA  941
      ||| ||||||||||||||  ||||||||||| ||||||||||| ||||||
seq2  TGTGGATACTTGAGCTTTTCCAGCTCACGTTGGGGAGCCTGGGTTTCTTA  950

seq1  GAG-TCTTT--GCAAAGC-TGTTTCCT  964
      ||| |||||   |||||| ||||||||
seq2  GAGTTCTTTTGCCAAAGCTTGTTTCCT  977