BAC Information

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BAC

Clone NameB6Ng01-204G04
Chromosome7 (Build37)
Map Location 24,409,485 - 24,410,355
singlet/doubletsinglet
Overlap geneEG546944
Upstream geneLOC667527, EG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083, EG667586, EG667599, LOC100043086, LOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103
Downstream geneV1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204G04.bB6Ng01-204G04.g
ACCGA024346GA024347
length874929
definitionB6Ng01-204G04.b B6Ng01-204G04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctttatgcaaatgagggattcctagtacttcagcttctgcca
atgatataaactcacactcaaacacttacacagtccccaatgtttatata
gccctaatttacccaaagcaaaagagttgtttcacccaaaactgtctcca
aagatgattatttccctgtattcatgccattccagatcctcctaacccat
ccaacctgataaggttcatttcttcaaatccagcccagtgcacaatggtg
cttggatatgctgagggcagaaaccaacccagactgatccttcagctgct
acaaatcacaatccaaacttcaaacacagacgataactttgttaaaatct
gtcaatattctattgtttttccttagaaaatcaagggagccatgctctca
gctcacagcagtggatgggtgtgctaccctgacctggctccttctgatac
tgtaaactctgctcaggtgtgctgtcctgtgctgagttgggaaagttggc
agcacagtggtgggacccatggcccggtgaccctggaacctgacagatat
gttaatggtcacctgagttagtagtttatccagagtttctttgagaccta
ataagatcttggcaagcctggtatgcatgcagtatcccatagttcagcca
gatctgcttacctgtgaataagaactaagagcccgaggtgattaggacag
aggagactgtagcaaaggatctaggtcggggacagccccggaccaccttg
ggcaggaactcggcagatggtcccttggtccccagaggcctctccatgat
gcaagtgctctatcatgctcaggatcttgggatcgatggtgagttggagt
tgcaacatcttgttccaagacagt
gaattccttgttttctccatctatggtaattgagtgttttgctgggttat
agtagcctgggctggcatttgtgttctcttgggtctgtatgatatatgcc
taggatcttctggctttcatagtctctggggagaagtcaggtgtaattct
gataggtctgcctttatatgttacttaacctttttcccttactgctttta
atattctttcattgttttgtgcatttggtgttttgattattatgtgacag
gaggaatttcttttcttgtccaaactatttggagttttgtagacttcttg
ttgtatgttcataggcatctctttctttaggttggggaagttttcttcta
cagttttgaagatatttactggccctttaagttaggaatcttccttcttg
tctatacctattatccttagattttttcttctcattgtatcctggatttc
ctggatgttttgggtttggatatttttgcattttctttgattgttgtgtc
aatgttttctatggtatcttgtgcacctgagagtctctttatctttttta
ttctgttggtgatgcttgcatccatggcttctgacttctttcctaggttt
tctatttctagagttgtctccctttgtgatttctttattgtttctacttc
catttttagatcctggatggttttattcaattctttctcttgtttagatg
tgttttcctgtaactctttaagggatttttgtgtttctttctttaagggg
ttctacttgtttacctgtgttctcctttatttctttaagagttatttatg
tccttatagtcctctatcatcatcatgaaaagtgactttagatccatatg
ttttatttttctagtgtgatgatatattccaggagtagcttatggtggga
agagttggcgtttctgaggatgatggcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_24409485_24410355
seq2: B6Ng01-204G04.b_46_919 (reverse)

seq1  ACTGTCTTGGAAC-AGATGTTGC-ACTCC-ACTCACCATCGATCCCAAGA  47
      ||||||||||||| ||||||||| ||||| ||||||||||||||||||||
seq2  ACTGTCTTGGAACAAGATGTTGCAACTCCAACTCACCATCGATCCCAAGA  50

seq1  TCCTGAGCATGATAGAGCACCTGCATCATGGAGAGGCCTCTGGGGACCAA  97
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCCTGAGCATGATAGAGCACTTGCATCATGGAGAGGCCTCTGGGGACCAA  100

seq1  GGGACCATCTGCCGAGTTCCTGCCCAAGGTGGTCCGGGGCTGTCCCCGAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCATCTGCCGAGTTCCTGCCCAAGGTGGTCCGGGGCTGTCCCCGAC  150

seq1  CTAGATCCTTTGCTACAGTCTCCTCTGTCCTAATCACCTCGGGCTCTTAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCCTTTGCTACAGTCTCCTCTGTCCTAATCACCTCGGGCTCTTAG  200

seq1  TTCTTATTCACAGGTAAGCAGATCTGGCTGAACTATGGGATACTGCATGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTCACAGGTAAGCAGATCTGGCTGAACTATGGGATACTGCATGC  250

seq1  ATACCAGGCTTGCCAAGATCTTATTAGGTCTCAAAGAAACTCTGGATAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGCTTGCCAAGATCTTATTAGGTCTCAAAGAAACTCTGGATAAA  300

seq1  CTACTAACTCAGGTGACCATTAACATATCTGTCAGGTTCCAGGGTCACCG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAACTCAGGTGACCATTAACATATCTGTCAGGTTCCAGGGTCACCG  350

seq1  GGCCATGGGTCCCACCACTGTGCTGCCAACTTTCCCAACTCAGCACAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGGTCCCACCACTGTGCTGCCAACTTTCCCAACTCAGCACAGGA  400

seq1  CAGCACACCTGAGCAGAGTTTACAGTATCAGAAGGAGCCAGGTCAGGGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACACCTGAGCAGAGTTTACAGTATCAGAAGGAGCCAGGTCAGGGTA  450

seq1  GCACACCCATCCACTGCTGTGAGCTGAGAGCATGGCTCCCTTGATTTTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCCATCCACTGCTGTGAGCTGAGAGCATGGCTCCCTTGATTTTCT  500

seq1  AAGGAAAAACAATAGAATATTGACAGATTTTAACAAAGTTATCGTCTGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAACAATAGAATATTGACAGATTTTAACAAAGTTATCGTCTGTG  550

seq1  TTTGAAGTTTGGATTGTGATTTGTAGCAGCTGAAGGATCAGTCTGGGTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTTGGATTGTGATTTGTAGCAGCTGAAGGATCAGTCTGGGTTG  600

seq1  GTTTCTGCCCTCAGCATATCCAAGCACCATTGTGCACTGGGCTGGATTTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCCCTCAGCATATCCAAGCACCATTGTGCACTGGGCTGGATTTG  650

seq1  AAGAAATGAACCTTATCAGGTTGGATGGGTTAGGAGGATCTGGAATGGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGAACCTTATCAGGTTGGATGGGTTAGGAGGATCTGGAATGGCA  700

seq1  TGAATACAGGGAAATAATCATCTTTGGAGACAGTTTTGGGTGAAACAACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACAGGGAAATAATCATCTTTGGAGACAGTTTTGGGTGAAACAACT  750

seq1  CTTTTGCTTTGGGTAAATTAGGGCTATATAAACATTGGGGACTGTGTAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTTTGGGTAAATTAGGGCTATATAAACATTGGGGACTGTGTAAG  800

seq1  TGTTTGAGTGTGAGTTTATATCATTGGCAGAAGCTGAAGTACTAGGAATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGTGTGAGTTTATATCATTGGCAGAAGCTGAAGTACTAGGAATC  850

seq1  CCTCATTTGCATAAAGAAGAATTC  871
      ||||||||||||||||||||||||
seq2  CCTCATTTGCATAAAGAAGAATTC  874