BAC Information

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BAC

Clone NameB6Ng01-204I14
Chromosome7 (Build37)
Map Location 56,194,312 - 56,377,427
singlet/doubletdoublet
Overlap genenone
Upstream geneMrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465
Downstream gene9130015G15Rik, 5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5, Nell1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204I14.bB6Ng01-204I14.g
ACCGA024460GA024461
length932893
definitionB6Ng01-204I14.b B6Ng01-204I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,376,501 - 56,377,427)(56,194,312 - 56,195,194)
sequence
gaattcagttgtaatgctctggaaaaactgtttcaaattagaatttaaga
tacatagatacgcctggcagtggtggtgccgggcggtggtggtgcacgcc
tttaatcccagcacttgggaggcagagacaggcggatttttctgagttca
aggccagcctggtctacaaagtgagttccaggacagccaagactatacag
agaaaccctgtctggaaaaaccaaaaaaaaaaaaaaaggtacatagatac
atattttctacagaaaggaccctgaatgcagactaaagatcagtttgtag
aaggcactaatctcttactagtgtccccctcccctgctcctgatcagcta
cttattgtcacttattctgaccttggaggacaatgttttaaaacgagaaa
gacctctcagaggtttttaacatgaaatgttccatcctccttttttacta
ctggaaaatagtggaaaacctgactccctttggattcctgtagagatttt
atcagttgggccttggagtcggctctgtacacccactgactggctcagcc
tgcgcagccagaagggggcagcaccactccgcagaattccctccgggctt
tgcttttctggtaagttcccgctggctggcaccacacagtcaggttggca
tggctttcaaccctcctgccttagcatgctggaggtgtatgtaccttcgg
gagggcgtggcaaaaccagcaggctagactcaatttgcagtgcccgagtg
cacctgaaatgtactctggcatttcaagtaaaactgtcagcttgtagacg
agaggccacttcagctttgctggacacttttacagttctgctgaatggca
tcttcttccgtctctcatcctggggagcttatgggggagccagtgtgtgt
gtgttgtgagtgtgtgttgtacacgtgcacgc
gaattcactatgtagattaggctggcctcgaactcatggagatctgctgg
gattaaaggcatgttccaccacaccaggtgccatttttaatttttggggg
ggcaggtatttgaaatacaactttttttttttctaattctaaacaaaaga
aagggactgacaggtatgaacaagatctgaccactgaacattgcaatgtg
actgtagcagtcttatctttgaaatttggggaggaaacaactgtgttcca
aagagctaaatacgcaagttccactcatgaccccagcccccaaaaccaaa
ggtatgttttaactgctgcgttcacttggaagcgcattcatctcccatct
gtccatccatccatccatccatccatccatccattcgtccatccatccat
ccatccatccatccatccatccatccatccgtccatccattcagtatccc
ataaaagcacacattctgcttggctagcccaggtggcacatactctgaca
tcccaggccagttgcctgtaaaagctagacgtctgacacagaggcccagc
tccactttctcactgctcaccctcaaccgggagggcagttgtttgtacaa
cctctaaatcaagatgataccacgctaccaaagctgggtccgtgaccagc
ccacgtggggcaagagcaggcacggcaaccaactctaagttaggtgctcc
aatgcatatctggaaggttagaggaaagcttttctaaacttattactttt
gggcagaaatgtcatagtgctgaaaatttctttttctcagtggaagacaa
taaatagatttttgcctttcagtttccttgtcctttaatgtcccactttt
gttgccatgtaacgttaacacaatgggagatgtttttcacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_56376501_56377427
seq2: B6Ng01-204I14.b_49_980 (reverse)

seq1  GCGTGCACGTGTAC-ACACACACTCAC-ACACACACACACTGGCT-CCCC  47
      |||||||||||||| |||||||||||| ||||||||||||||||| ||||
seq2  GCGTGCACGTGTACAACACACACTCACAACACACACACACTGGCTCCCCC  50

seq1  AT-AGCTCCCAAGGATGAGAGACGGAAGAAGATGCCATTCAGCAG-ACTG  95
      || ||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  ATAAGCTCCCCAGGATGAGAGACGGAAGAAGATGCCATTCAGCAGAACTG  100

seq1  T-AAAGTGTCCAGCAAAGCTGAAGTGGCCTCCTCCGTCTACAGCCTGACA  144
      | |||||||||||||||||||||||||||||   ||||||||  ||||||
seq2  TAAAAGTGTCCAGCAAAGCTGAAGTGGCCTC--TCGTCTACAAGCTGACA  148

seq1  GTTTTACTTGAAATGCCAGAGTACATTTCAGGTGCACTCGGGCACTGCAA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACTTGAAATGCCAGAGTACATTTCAGGTGCACTCGGGCACTGCAA  198

seq1  ATTGAGTCTAGCCTGCTGGTTTTGCCACGCCCTCCCGAAGGTACATACAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTCTAGCCTGCTGGTTTTGCCACGCCCTCCCGAAGGTACATACAC  248

seq1  CTCCAGCATGCTAAGGCAGGA-GGTTGAAAGCCATGCCAACCTGACTGTG  293
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCCAGCATGCTAAGGCAGGAGGGTTGAAAGCCATGCCAACCTGACTGTG  298

seq1  TGGTGCCAGCCAGCGGGAACTTACCAGAAAAGCAAAGCCCGGAGGGAATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCCAGCCAGCGGGAACTTACCAGAAAAGCAAAGCCCGGAGGGAATT  348

seq1  CTGCGGAGTGGTGCTGCCCCCTTCTGGCTGCGCAGGCTGAGCCAGTCAGT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGGAGTGGTGCTGCCCCCTTCTGGCTGCGCAGGCTGAGCCAGTCAGT  398

seq1  GGGTGTACAGAGCCGACTCCAAGGCCCAACTGATAAAATCTCTACAGGAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTACAGAGCCGACTCCAAGGCCCAACTGATAAAATCTCTACAGGAA  448

seq1  TCCAAAGGGAGTCAGGTTTTCCACTATTTTCCAGTAGTAAAAAAGGAGGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGGGAGTCAGGTTTTCCACTATTTTCCAGTAGTAAAAAAGGAGGA  498

seq1  TGGAACATTTCATGTTAAAAACCTCTGAGAGGTCTTTCTCGTTTTAAAAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATTTCATGTTAAAAACCTCTGAGAGGTCTTTCTCGTTTTAAAAC  548

seq1  ATTGTCCTCCAAGGTCAGAATAAGTGACAATAAGTAGCTGATCAGGAGCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCTCCAAGGTCAGAATAAGTGACAATAAGTAGCTGATCAGGAGCA  598

seq1  GGGGAGGGGGACACTAGTAAGAGATTAGTGCCTTCTACAAACTGATCTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGGGACACTAGTAAGAGATTAGTGCCTTCTACAAACTGATCTTT  648

seq1  AGTCTGCATTCAGGGTCCTTTCTGTAGAAAATATGTATCTATGTACCTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCATTCAGGGTCCTTTCTGTAGAAAATATGTATCTATGTACCTTT  698

seq1  TTTTTTTTTTTTGGTTTTTCCAGACAGGGTTTCTCTGTATAGTCTTGGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGGTTTTTCCAGACAGGGTTTCTCTGTATAGTCTTGGCT  748

seq1  GTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAAAATC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAAAATC  798

seq1  CGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCACC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCACC  848

seq1  GCCCGGCACCACCACTGCCAGGCGTATCTATGTATCTTAAATTCTAATTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGCACCACCACTGCCAGGCGTATCTATGTATCTTAAATTCTAATTT  898

seq1  GAAACAGTTTTTCCAGAGCATTACAACTGAATTC  927
      ||||||||||||||||||||||||||||||||||
seq2  GAAACAGTTTTTCCAGAGCATTACAACTGAATTC  932

seq1: chr7_56194312_56195194
seq2: B6Ng01-204I14.g_69_961

seq1  GAATTCACTATGTAGATTAGGCTGGCCTCGAACTCATGGAGATCTGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGATTAGGCTGGCCTCGAACTCATGGAGATCTGCTGG  50

seq1  GATTAAAGGCATGTTCCACCACACCAGGTGCCATTTTTAATTTTTGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGGCATGTTCCACCACACCAGGTGCCATTTTTAATTTTTGGGGG  100

seq1  GGCAGGTATTTGAAATACAACTTTTTTTTTTTCTAATTCTAAACAAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTATTTGAAATACAACTTTTTTTTTTTCTAATTCTAAACAAAAGA  150

seq1  AAGGGACTGACAGGTATGAACAAGATCTGACCACTGAACATTGCAATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACTGACAGGTATGAACAAGATCTGACCACTGAACATTGCAATGTG  200

seq1  ACTGTAGCAGTCTTATCTTTGAAATTTGGGGAGGAAACAACTGTGTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCAGTCTTATCTTTGAAATTTGGGGAGGAAACAACTGTGTTCCA  250

seq1  AAGAGCTAAATACGCAAGTTCCACTCATGACCCCAGCCCCCAAAACCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTAAATACGCAAGTTCCACTCATGACCCCAGCCCCCAAAACCAAA  300

seq1  GGTATGTTTTAACTGCTGCGTTCACTTGGAAGCGCATTCATCTCCCATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTTTTAACTGCTGCGTTCACTTGGAAGCGCATTCATCTCCCATCT  350

seq1  GTCCATCCATCCATCCATCCATCCATCCATCCATTCGTCCATCCATCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCCATCCATCCATCCATCCATCCATCCATTCGTCCATCCATCCAT  400

seq1  CCATCCATCCATCCATCCATCCATCCATCCGTCCATCCATTCAGTATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATCCATCCATCCATCCATCCATCCGTCCATCCATTCAGTATCCC  450

seq1  ATAAAAGCACACATTCTGCTTGGCTAGCCCAGGTGGCACATACTCTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCACACATTCTGCTTGGCTAGCCCAGGTGGCACATACTCTGACA  500

seq1  TCCCAGGCCAGTTGCCTGTAAAAGCTAGACGTCTGACACAGAGGCCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCCAGTTGCCTGTAAAAGCTAGACGTCTGACACAGAGGCCCAGC  550

seq1  TCCACTTTCTCACTGCTCACCCTCAACCGGGAGGGCAGTTGTTTGTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTCTCACTGCTCACCCTCAACCGGGAGGGCAGTTGTTTGTACAA  600

seq1  CCTCTAAATCAAGATGATACCACGCTACCAAAGCTGGGTCCGTGACCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAATCAAGATGATACCACGCTACCAAAGCTGGGTCCGTGACCAGC  650

seq1  CCACGTGGGGCAAGAGCAGGCACGGCAACCAACTCTAAGTTAGGTGCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGGGGCAAGAGCAGGCACGGCAACCAACTCTAAGTTAGGTGCTCC  700

seq1  AATGCATATCTGGAAGGTTAGAGGAAAGCTTTTTCTAAACTTATTAC-TT  749
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  AATGCATATCTGGAAGGTTAGAGGAAAGC-TTTTCTAAACTTATTACTTT  749

seq1  TGGGCAGAAATGTCATAGTGCTGAAAATT--CTTTTCTCAGTGGAAGACA  797
      |||||||||||||||||||||||||||||   ||||||||||||||||||
seq2  TGGGCAGAAATGTCATAGTGCTGAAAATTTCTTTTTCTCAGTGGAAGACA  799

seq1  ATAAATAGATTTTTGCC-TTCAGTTTCC-TGTCC-TTAATGT-CCAC-TT  842
      ||||||||||||||||| |||||||||| ||||| ||||||| |||| ||
seq2  ATAAATAGATTTTTGCCTTTCAGTTTCCTTGTCCTTTAATGTCCCACTTT  849

seq1  TGTTGCCATGTAACG-TAACACAAT-GGAGATG-TTTTCACACA  883
      ||||||||||||||| ||||||||| ||||||| ||||||||||
seq2  TGTTGCCATGTAACGTTAACACAATGGGAGATGTTTTTCACACA  893