BAC Information

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BAC

Clone NameB6Ng01-205E16
Chromosome7 (Build37)
Map Location 33,669,955 - 33,670,940
singlet/doubletsinglet
Overlap genenone
Upstream geneEG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383
Downstream geneEG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205E16.bB6Ng01-205E16.g
ACCGA025014GA025015
length986947
definitionB6Ng01-205E16.b B6Ng01-205E16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaataataaccttgcaattcattggggagtctggatttttgg
attcaaggttgggtctgatttgattgaaagatattgcagggacaacatct
gggacattgaggtgtcacagctcaattgtggtgttgcctaaatgcaatgc
agaatgcattagagaatgctaagacaccatagtcattactctagagtgcc
tgtcactctcttgggacagggtccacagggcacatagatgacctcccaga
ctgaactccccaggaacatggaacagagtaggaccaggaataccaagggt
ctgttgaggaccacacaggctttagatagcagaatctgtccctgctctct
agtgtttggtacatgatccagttgtgcatgtttgtgagtcacaatgtgtc
catgtagaaaataaaataaaactacctatttccaaagtttttgtgaggct
tcctgcccctcacagtgaagagaatttcagcctggatatcagagtgggac
gtggccagaacagaattcaggttatcctaatatcaactacccagttctga
acccagttacttcaccaatggatgttacatggagtggggacccatggtct
tagggctttggtatctgtcctgtggctcttctctgtggacatggcaggaa
gtcgtttcccacaccagtcaccaaatagctgttctgtggcctgtctcaag
gtcatgtgccttactgctccatcaatgattcagatcctcacataggtccc
aggctcacatccatcaggcataaccagaagaatgaatatatatatggaag
gaccaacatagacagtctttctcatttatagagtatgtgctggaaagagt
aaaatgtattattctttttcataaggctatgataaaaataaccatgggtt
gagtatatatatatatatgtatatatatatatatatatatatatatattt
atatatatatatatacatatatatatatatatatat
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatagattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataagaccagggaaaaatctgcaggacctgagataaa
gaagatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
ataatagacctaagctctgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
ccaaagcatggcccaccacagagtcatctcatttcattacagggccctag
gatatcaaatcatgtcccactataaagctccattgccttgacgtgggaat
cctctgaaggacagcaagggaaattcataccttatgtgctcccactcccg
gttaacctctggggaaagggatattatgcatcatttgggctttatttttg
tccaatgaaaacgccccttcgggagggtattcaactaaagcaaaaaatat
tatggccaaagatgggtttataatgaaggaaaagggttaggacatccaga
acaggggaagggatagagcccatctcacctctaatggaaacccagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33669955_33670940
seq2: B6Ng01-205E16.b_48_1033

seq1  GAATTCAACAATAATAACCTTGCAATTCATTGGGGAGTCTGGATTTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAATAATAACCTTGCAATTCATTGGGGAGTCTGGATTTTTGG  50

seq1  ATTCAAGGTTGGGTCTGATTTGATTGAAAGATATTGCAGGGACAACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGGTTGGGTCTGATTTGATTGAAAGATATTGCAGGGACAACATCT  100

seq1  GGGACATTGAGGTGTCACAGCTCAATTGTGGTGTTGCCTAAATGCAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATTGAGGTGTCACAGCTCAATTGTGGTGTTGCCTAAATGCAATGC  150

seq1  AGAATGCATTAGAGAATGCTAAGACACCATAGTCATTACTCTAGAGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCATTAGAGAATGCTAAGACACCATAGTCATTACTCTAGAGTGCC  200

seq1  TGTCACTCTCTTGGGACAGGGTCCACAGGGCACATAGATGACCTCCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTCTCTTGGGACAGGGTCCACAGGGCACATAGATGACCTCCCAGA  250

seq1  CTGAACTCCCCAGGAACATGGAACAGAGTAGGACCAGGAATACCAAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCCCCAGGAACATGGAACAGAGTAGGACCAGGAATACCAAGGGT  300

seq1  CTGTTGAGGACCACACAGGCTTTAGATAGCAGAATCTGTCCCTGCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGGACCACACAGGCTTTAGATAGCAGAATCTGTCCCTGCTCTCT  350

seq1  AGTGTTTGGTACATGATCCAGTTGTGCATGTTTGTGAGTCACAATGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGGTACATGATCCAGTTGTGCATGTTTGTGAGTCACAATGTGTC  400

seq1  CATGTAGAAAATAAAATAAAACTACCTATTTCCAAAGTTTTTGTGAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGAAAATAAAATAAAACTACCTATTTCCAAAGTTTTTGTGAGGCT  450

seq1  TCCTGCCCCTCACAGTGAAGAGAATTTCAGCCTGGATATCAGAGTGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCCCTCACAGTGAAGAGAATTTCAGCCTGGATATCAGAGTGGGAC  500

seq1  GTGGCCAGAACAGAATTCAGGTTATCCTAATATCAACTACCCAGTTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAGAACAGAATTCAGGTTATCCTAATATCAACTACCCAGTTCTGA  550

seq1  ACCCAGTTACTTCACCAATGGATGTTACATGGAGTGGGGACCCATGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTTACTTCACCAATGGATGTTACATGGAGTGGGGACCCATGGTCT  600

seq1  TAGGGCTTTGGTATCTGTCCTGTGGCTCTTCTCTGTGGACATGGCAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTTTGGTATCTGTCCTGTGGCTCTTCTCTGTGGACATGGCAGGAA  650

seq1  GTCGTTTCCCACACCAGTCACCAAATAGCTGTTCTGTGGCCTGTCTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTTTCCCACACCAGTCACCAAATAGCTGTTCTGTGGCCTGTCTCAAG  700

seq1  GTCATGTGCCTTACTGCTCCATCAATGATTCAGATCCTCACATAGGTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGCCTTACTGCTCCATCAATGATTCAGATCCTCACATAGGTCCC  750

seq1  AGGCTCACA-CCATCAGGCATAACCAGAAGAATGAATATATATATGGAAG  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACATCCATCAGGCATAACCAGAAGAATGAATATATATATGGAAG  800

seq1  GACCAACATAGACAGTCTTTCTCA-TTATAGAGTATGTGCTGGAAAGAGT  848
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACCAACATAGACAGTCTTTCTCATTTATAGAGTATGTGCTGGAAAGAGT  850

seq1  AAAATGTATTATTCTTTTTCATAAGGCTATGAT-AAAATAACCAT-GGTT  896
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  AAAATGTATTATTCTTTTTCATAAGGCTATGATAAAAATAACCATGGGTT  900

seq1  GAGTATATATATATATATGTATATATATATATATATATATATATATATAT  946
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGTATATATATATATATGTATATATATATATATATATATATATATATTT  950

seq1  ATATATATATATATATATGTATATATATATATATATATAT  986
      ||||||||||||||| || |||||||||||||||||    
seq2  ATATATATATATATACATATATATATATATATATAT----  986