BAC Information

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BAC

Clone NameB6Ng01-205L04
Chromosome7 (Build37)
Map Location 121,833,365 - 121,834,487
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca
Downstream geneLOC100043295, Calcb, Insc, EG627967, LOC668472, Sox6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205L04.bB6Ng01-205L04.g
ACCGA025311GA025312
length1,1161,159
definitionB6Ng01-205L04.b B6Ng01-205L04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctatgtttcccagttccaccacacaaactcagttattttcag
gtcacatttttatgattctataatcttagttaagtaatattctcagacat
tatagatttccgactaactagatccaagcaataattgcagtaaaaatgtt
gttctgtaaaatgaatattaaaaataataacatcatgaaatattaattaa
gcatttactatatgctagtcatcattctaaagtttttataaattgaatta
tttaaatcttattgagactcagagaggtcaaggcacgtatccaaagagta
tagttagtaaacaatgagcatgaacaccagccagtgctgctttgtgccaa
agcactaactcctttaaattgccaccagtctaaatatgaggtaaactacc
tacacagctctcctttacctaggttgtttttctatgtgaatagctgcatg
ttgcatccacactcttaccaaattttactacctaacacaatatagtccca
gacactgctgtgaattaggaaagtctacaaattaagaagtgtgacaaact
agaatatatttcacaaaggtaagtactggcatcaaaagccattaaacagt
gtacaggataagaagataatgaagtagggtaagttttctctgtgcttctt
gctcatgacaggccaagcaattatgatttgaaattttaagttcaaatcat
gaatcttaaagttcatttcaaagaataactttattcacattgtttagaac
ttaagcaccgtacttctggaagcatttcatcaaagactatgaaggatgtt
agagaagaccaagttttatattaggtaagagatgtgtttccttcagagct
ctgaaacctacctatcacttcattaccctgctcagtgctgaatgagaaag
attaaaaataaattcctcaaaatatttttttaataatatttatttaactc
atttacatttccaatgctataccaaaagtcccccatatccacccaccccc
acttcctgcccacccactcccctttttggcctggtctcaaaatatttttg
tatttatttttagagactatatttttattttgaaatggcatctattcaac
tgtacacatgaacatg
gaattcttcaggatctgttgttatgcgtcccttttcatttctgattttgt
taataaggatgctgtccttgtgccctctagtgagcctgactaagggttta
tctatcttgttgatttactcaaagaaccagctcctcgattggttgattct
ttgaatagttcttgtttccacttggttggtttcgcccctgagtttaatta
tttcctgccatctactcctcttgggtgaatttgcttccttttcttctaga
ccttttaggtgtgttgtcaagctgctaatgtgtgctctctctagtttctt
tttgtaggcactcagagctatgagttttcctcttagaagtgctttcattg
tgtcccataagtttgagtatgttgtggcttcattttcattaaactccaga
aagtccttaatttctttctttattccttccttgaccaaggtatcattgag
aagagtgttgttcagtttccacgtgaatgttggctttctattatttattt
tgttattaaagatcagccttagtccatggtgatctgataggatgcatggg
acaatttcagtatttttgtatatgttgaggtttgttttgtgaccaattat
gtggctaattttggagaaggtaccatgaggtgcggagaagaaggtatatt
cttttgttttaggataaaatgttctgtagatatctgttagatccatttgt
ttcataacttctgttagtttcactgtgtccctgtttagtttctgtttcca
tgatctgtccattggtgaaagtggtgtgttgaagtctcccactattattg
tgtgaggtgcaatgtgtgctttgagctttactaaagtttctttaatgaat
gtggctgtccttgtattttgagcatagatattcataattgatatttcctc
ttggaggatttacctttgatgagtatgaagtgccctccttgtcttttttg
atgacttgggttgaagtcgattttattagatatagaatggctactccagc
ttgtttcttcataccatttgcctggcaaattgttttcagcattcatctga
agtagtagtctatctttttctctgaaatgactttctggtaggagcaatgt
gggtcctgctggtagcagtctgtagtcaaccttcttttttattgggaatg
agagtccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121833365_121834487
seq2: B6Ng01-205L04.b_45_1160 (reverse)

seq1  CATGTTTAATGTGTACAAGTTGAATAGGATGCCATTTCAAAATAAAAATA  50
      |||| || |||||||| ||||||||| |||||||||||||||||||||||
seq2  CATG-TTCATGTGTAC-AGTTGAATA-GATGCCATTTCAAAATAAAAATA  47

seq1  TAGTCTTCTAAAATAAATACAAAAATATTTTGAGGACCAGGGCCAAAAAG  100
      ||||||   |||||||||||||||||||||||| ||||| ||||||||| 
seq2  TAGTCTCTAAAAATAAATACAAAAATATTTTGA-GACCA-GGCCAAAAA-  94

seq1  GGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTT  150
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  GGGGAGTGGGTGGGCA-GGAAGTGGGGGTGGGTGGATATGGGGGACTTTT  143

seq1  GGTATAGCATTGGAAATGTAAATGAGTTAAATAAATATTATTAAAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGCATTGGAAATGTAAATGAGTTAAATAAATATTATTAAAAAAAT  193

seq1  ATTTTGAGGAATTTATTTTTAATCTTTCTCATTCAGCACTGAGCAGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGGAATTTATTTTTAATCTTTCTCATTCAGCACTGAGCAGGGTA  243

seq1  ATGAAGTGATAGGTAGGTTTCAGAGCTCTGAAGGAAACACATCTCTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGATAGGTAGGTTTCAGAGCTCTGAAGGAAACACATCTCTTACC  293

seq1  TAATATAAAACTTGGTCTTCTCTAACATCCTTCATAGTCTTTGATGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAAACTTGGTCTTCTCTAACATCCTTCATAGTCTTTGATGAAAT  343

seq1  GCTTCCAGAAGTACGGTGCTTAAGTTCTAAACAATGTGAATAAAGTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAGAAGTACGGTGCTTAAGTTCTAAACAATGTGAATAAAGTTATT  393

seq1  CTTTGAAATGAACTTTAAGATTCATGATTTGAACTTAAAATTTCAAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAATGAACTTTAAGATTCATGATTTGAACTTAAAATTTCAAATCA  443

seq1  TAATTGCTTGGCCTGTCATGAGCAAGAAGCACAGAGAAAACTTACCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCTTGGCCTGTCATGAGCAAGAAGCACAGAGAAAACTTACCCTAC  493

seq1  TTCATTATCTTCTTATCCTGTACACTGTTTAATGGCTTTTGATGCCAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATCTTCTTATCCTGTACACTGTTTAATGGCTTTTGATGCCAGTA  543

seq1  CTTACCTTTGTGAAATATATTCTAGTTTGTCACACTTCTTAATTTGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTTTGTGAAATATATTCTAGTTTGTCACACTTCTTAATTTGTAGA  593

seq1  CTTTCCTAATTCACAGCAGTGTCTGGGACTATATTGTGTTAGGTAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTAATTCACAGCAGTGTCTGGGACTATATTGTGTTAGGTAGTAAA  643

seq1  ATTTGGTAAGAGTGTGGATGCAACATGCAGCTATTCACATAGAAAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTAAGAGTGTGGATGCAACATGCAGCTATTCACATAGAAAAACAA  693

seq1  CCTAGGTAAAGGAGAGCTGTGTAGGTAGTTTACCTCATATTTAGACTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTAAAGGAGAGCTGTGTAGGTAGTTTACCTCATATTTAGACTGGT  743

seq1  GGCAATTTAAAGGAGTTAGTGCTTTGGCACAAAGCAGCACTGGCTGGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTTAAAGGAGTTAGTGCTTTGGCACAAAGCAGCACTGGCTGGTGT  793

seq1  TCATGCTCATTGTTTACTAACTATACTCTTTGGATACGTGCCTTGACCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTCATTGTTTACTAACTATACTCTTTGGATACGTGCCTTGACCTC  843

seq1  TCTGAGTCTCAATAAGATTTAAATAATTCAATTTATAAAAACTTTAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTCAATAAGATTTAAATAATTCAATTTATAAAAACTTTAGAAT  893

seq1  GATGACTAGCATATAGTAAATGCTTAATTAATATTTCATGATGTTATTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTAGCATATAGTAAATGCTTAATTAATATTTCATGATGTTATTAT  943

seq1  TTTTAATATTCATTTTACAGAACAACATTTTTACTGCAATTATTGCTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTCATTTTACAGAACAACATTTTTACTGCAATTATTGCTTGG  993

seq1  ATCTAGTTAGTCGGAAATCTATAATGTCTGAGAATATTACTTAACTAAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTTAGTCGGAAATCTATAATGTCTGAGAATATTACTTAACTAAGA  1043

seq1  TTATAGAATCATAAAAATGTGACCTGAAAATAACTGAGTTTGTGTGGTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAATCATAAAAATGTGACCTGAAAATAACTGAGTTTGTGTGGTGG  1093

seq1  AACTGGGAAACATAGCTGAATTC  1123
      |||||||||||||||||||||||
seq2  AACTGGGAAACATAGCTGAATTC  1116