BAC Information

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BAC

Clone NameB6Ng01-205L16
Chromosome7 (Build37)
Map Location 9,916,499 - 9,917,630
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961
Downstream geneV2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205L16.bB6Ng01-205L16.g
ACCGA025333GA025334
length1,131858
definitionB6Ng01-205L16.b B6Ng01-205L16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaccatctcactgtgttcctcctgattttattttccatcacat
tgttttgttagaaattagccctgtattattactatttattattagtagta
gtaatagtagtagtaattgccttattttatttatttactttacatccaaa
ttgcagcctctcctcactttcctcctttcagtcctctcatttcatcccct
ccactgtctactccacttcactttctcctcagtaaatgggaggcctctca
ttgatatcaatccacattggcatatcaagttgcagtaagacaaggtaaat
tttctcctactgagtccagacaagccagcccaattatgggaaaggaatcc
aagaacaggcagcagagtcaaagtcaactactactccagctggtaggggt
cccacatgaagattctgctgcatatctgaatgtttccttttaaataaatg
gtaggttttattaggtatttattgtgcgttacaaagaatggctttgtaca
taaagaacctatgaaacagatggatatacttcacaagcttgtaatcaagt
ggttctttcaatatttctaaaactgtaagcttcatatagtggtgatcccc
aacaaaaaaatattctgtttttacttcacaactataattttgcctctgtt
atgaatcattttgtatataactgatatgcaaccccaaaggggttacagcc
cacagattgagaggcactttattccaacactttggaagcacaggcaggca
gatacattgagatagagacaaccctggactacatattgtattccaggcca
ccctgggctttacagtacaaatttctcaaataacaagatccagaaatttt
ttgtattccctcagcattagcaacagagaattgaataacaagtagatctg
ctgaatgcatatttttaagataatatacagtacatgatatcacttcttct
ataagctacatatgaaatcatgtactaatccctttcatatactgtgataa
atccaacgaataatttgatttatcaaagaaagcctttattttggtttaca
gtgtcagtgggtagagtacatgcagagagatggaacattctgagaagtct
cctttgaacccacaaataccaatgggaaaaa
gaattctttgtttagctctgtctgtactccatttttaaatggggttattt
ggttttctggactatagcttcttgaattctttatatatattggatattat
tcccctatcaggtataggattggtaaagatcttttcccaattatcctgtc
ccgcgggattcagttatttgtgggtgtgagggggactgcaaacctggaag
gaaatgggaggaagaaaaagaagagcaggagaccaggaaggatacctatc
gaggtctattatgctgaggtgccttctttttaaagcatacatcacaggga
atatgggaggggtcgagggagaattatacaaataacaaagaagtgggcaa
ctgctgacatgggggccgaagtcaggcgccaggcagtgggcactctgcat
cttatctctggaacatagatcctccttgacagccttgggggtcaggctgg
gctcaggtgtaactcatgtccttggatggcaggggaactcaggaagagat
aggaaagaggggactataatttagcttttacagcctcaggtgccaagaaa
ggaatagggaggaagggggttgataaccagctcttagtacaaggccattt
ggtctgttagggagattgtgaagggctcacttttctcacgggatggtctc
tgacacccaatctgttttgttgatgttttgtctttactaaacatactttg
cctaacagaagctttgcagttttatgaggtctcattttgtcaatttttga
tgttacagccttatgccactgctgttcttgttcaggaattttcccctctg
gaccatatccttgaggtttttccccacattctctactacaattttaagtt
gtttttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9916499_9917630
seq2: B6Ng01-205L16.b_45_1175

seq1  GAATTCAAACCATCTCACTGTGTTCCTCCTGATTTTATTTTCCATCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCATCTCACTGTGTTCCTCCTGATTTTATTTTCCATCACAT  50

seq1  TGTTTTGTTAGAAATTAGCCCTGTATTATTACTATTTATTATTAGTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTAGAAATTAGCCCTGTATTATTACTATTTATTATTAGTAGTA  100

seq1  GTAATAGTAGTAGTAATTGCCTTATTTTATTTATTTACTTTACATCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGTAGTAGTAATTGCCTTATTTTATTTATTTACTTTACATCCAAA  150

seq1  TTGCAGCCTCTCCTCACTTTCCTCCTTTCAGTCCTCTCATTTCATCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCCTCTCCTCACTTTCCTCCTTTCAGTCCTCTCATTTCATCCCCT  200

seq1  CCACTGTCTACTCCACTTCACTTTCTCCTCAGTAAATGGGAGGCCTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCTACTCCACTTCACTTTCTCCTCAGTAAATGGGAGGCCTCTCA  250

seq1  TTGATATCAATCCACATTGGCATATCAAGTTGCAGTAAGACAAGGTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATCAATCCACATTGGCATATCAAGTTGCAGTAAGACAAGGTAAAT  300

seq1  TTTCTCCTACTGAGTCCAGACAAGCCAGCCCAATTATGGGAAAGGAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTACTGAGTCCAGACAAGCCAGCCCAATTATGGGAAAGGAATCC  350

seq1  AAGAACAGGCAGCAGAGTCAAAGTCAACTACTACTCCAGCTGGTAGGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGGCAGCAGAGTCAAAGTCAACTACTACTCCAGCTGGTAGGGGT  400

seq1  CCCACATGAAGATTCTGCTGCATATCTGAATGTTTCCTTTTAAATAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATGAAGATTCTGCTGCATATCTGAATGTTTCCTTTTAAATAAATG  450

seq1  GTAGGTTTTATTAGGTATTTATTGTGCGTTACAAAGAATGGCTTTGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTTATTAGGTATTTATTGTGCGTTACAAAGAATGGCTTTGTACA  500

seq1  TAAAGAACCTATGAAACAGATGGATATACTTCACAAGCTTGTAATCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACCTATGAAACAGATGGATATACTTCACAAGCTTGTAATCAAGT  550

seq1  GGTTCTTTCAATATTTCTAAAACTGTAAGCTTCATATAGTGGTGATCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTCAATATTTCTAAAACTGTAAGCTTCATATAGTGGTGATCCCC  600

seq1  AACAAAAAAATATTCTGTTTTTACTTCACAACTATAATTTTGCCTCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAATATTCTGTTTTTACTTCACAACTATAATTTTGCCTCTGTT  650

seq1  ATGAATCATTTTGTATATAACTGATATGCAACCCCAAAGGGGTTACAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCATTTTGTATATAACTGATATGCAACCCCAAAGGGGTTACAGCC  700

seq1  CACAGATTGAGAGGCACTTTATTCCAACACTTTGGAAGCACAGGCAGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATTGAGAGGCACTTTATTCCAACACTTTGGAAGCACAGGCAGGCA  750

seq1  GATACATTGAGATAGAGACAACCCTGGACTACATATTGTATTCCAGGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTGAGATAGAGACAACCCTGGACTACATATTGTATTCCAGGCCA  800

seq1  CCCTGGGCTTTACAGTACAAATTTCTCAAATAACAAGATCCAGAAATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGCTTTACAGTACAAATTTCTCAAATAACAAGATCCAGAAATTTT  850

seq1  TTGTATTCCCTCAGCATTAGCAACAGAGAATTGAATAACAAGTAGATCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTCCCTCAGCATTAGCAACAGAGAATTGAATAACAAGTAGATCTG  900

seq1  CTGAATGCATA-TTTTAAGATAATATACAGTACATGATATCACTTCTTCT  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCATATTTTTAAGATAATATACAGTACATGATATCACTTCTTCT  950

seq1  ATAAGCTACATATGAAATCATGTACTAATCCCTTTCATATTACTGTGATA  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  ATAAGCTACATATGAAATCATGTACTAATCCCTTTCATA-TACTGTGAT-  998

seq1  AAATCCAACGAATAATTTGATTTATCAAAGAAAGCCTTTATTTTGGTTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAACGAATAATTTGATTTATCAAAGAAAGCCTTTATTTTGGTTTA  1048

seq1  CAGTGTCAGTGGGTTAGAGTACATGCAGAAGAGATGGAACA-TCTGAGAG  1098
      ||||||||||||| |||||||||||||| |||||||||||| ||||||| 
seq2  CAGTGTCAGTGGG-TAGAGTACATGCAG-AGAGATGGAACATTCTGAGAA  1096

seq1  TTCTCCTTTTGGACCACAAATA-CAATGGAAAAAA  1132
       ||||||||    ||||||||| |||||| |||||
seq2  GTCTCCTTTGAACCCACAAATACCAATGGGAAAAA  1131