BAC Information

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BAC

Clone NameB6Ng01-206A08
Chromosome7 (Build37)
Map Location 8,504,552 - 8,505,720
singlet/doubletsinglet
Overlap geneLOC100042703
Upstream geneVmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961
Downstream geneLOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206A08.bB6Ng01-206A08.g
ACCGA025547GA025548
length1,1451,075
definitionB6Ng01-206A08.b B6Ng01-206A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtcagccaggactatacaatgaaaccctgtctcaaaaaaaa
aaaaaaaatcaaaacaaaacaaaaacccaaaacaaaaaccaaaaaacaaa
acaaaacgcatcaatgttttttaagagccaaacgataatcagtttatatg
ttcttatagatatgttagtttatattattatattcagactattgtcatgc
ttattgaaaattgttagcctaattttacatcatgaatagagctataaaat
actaatttttatacctttcttatttaaacatgaatcttagtgtgttcatt
tgctgacaattaacatagaagtttgtaacaaaactcaagatcaccattct
ttagagcaccactctactatagtgtgaccttgaagggaaaaagtccaata
gggaagtaaaacttaagcataaagcaccacttaagacgacctgataaaaa
ctttgcgatgcttcgggtagagaaagctcagaataagagctcagaatgtc
tggagaaagaatgatgtcaaaagataattccccattcctacattgcctgg
cgtaggtcatgcaatgaagttttaaatgtgcaaaataaagaaagagttag
gatatacaacttgaaaattaaccctgataataaaactaggtttctttttg
cctttagccttctttaaaaagtataccagttgaatgttagaaatataatt
gcatttttttttataaaagtcctactatatatcaggcacaaaggtaaaaa
taataaatttctctatatataaacttgctatttacttactgtttctccat
ataagatattaaagtatactctgataaatgatgcttatatgtccatgcag
tgtgacacatggacacatattaggggtatctaactctcatttatggtcaa
gtagtacttcctaaatatgttataagaagcacaactccaaaaataattat
ttttctgagtgaatgataggaagttgacaaaatccaagtagggaaagatg
agcatccagagtatcagcagttttgaggaatatactctaattattagcaa
caaacggagattgtctcatccagaacctcaaaatcttgtctacaatagat
gatagtcagttgcagcaatgactgtctcatgggatcaagtcaatg
gaattctacgcaaatttattcttttttatttattttttattttttaatta
gatatttactttatttgcatttcaaatgctatcccaaaaggctacacttc
ccccgccctgctccccaacccacccactcctgcttcctgaccctggcatt
ttcctctactagggaatataatcttcataagaccaagagcctctcctccc
aatgatggccgagtaggccaacttctgctaaatatgcagctaaagacttg
aggtctgtgggtactggttagttcatatagttgttcctactattgggttg
cagacccctttagttccttgggtacattctctagttcctccattgggggc
cctatgttccatccaatagatgacactgagcatccacttctggatttgcc
aggtactggtagagcctcacaagagacaggtatatcagggtcctgtcaga
aactgttgctagcataggcaatagtgtcttataaaaatttataaaaattt
actgtcttatatgatatacataaatagttaatataaaatttatataaata
tatacttctataattataatatatgatatataaaattataatatacaaat
aatataaaaatatataaatgtataaagtcatatatacaatatatatacta
aagtcttatataatatatatattcacatttaatataaaataatgtgaata
tataattacataattataatatataccctatttaaagtataatatggaaa
taatatttaatatataatatataaatatatgtttatatgtataataaata
gtgtcttataaaaacataaaaacacttaaacttgtagtagagaatgtggg
gaaaaacctcaaggatatgggtccagagggaaaatttctgacagaaacag
cagtggctatgctgtaacatcaaaaattgacaatgagacttcaataactg
caagtcttcctgtaggcaagtatgtttagtaagaacaaaaccatcaccaa
acagaattgagtgccgaggaccattcccgcgagaaaggtgaggccttcac
aatctccttaccagactcaatgacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8504552_8505720
seq2: B6Ng01-206A08.b_45_1189 (reverse)

seq1  CATTGACATTTGATCCCAAATGAGACCAACTCATTGCTTCCACTTGACTA  50
      |||||||  ||||||||  |||||||  | |||||||| | || ||||||
seq2  CATTGAC--TTGATCCC--ATGAGAC--AGTCATTGCTGCAAC-TGACTA  43

seq1  TTCCATCTATTGTAGACAGGATTTTTGAGGTTTCTGGGATGAGACCAATT  100
      |  ||||||||||||||| || |||||||| |||| |||||||||  | |
seq2  T--CATCTATTGTAGACAAGA-TTTTGAGG-TTCT-GGATGAGAC--AAT  86

seq1  CTCCGTTTTGTTTGCTAATATATTAGAGTTAATATTCCTCAAAAACTGCT  150
      ||||||||   ||||||||| ||||||||  ||||||||| |||||||||
seq2  CTCCGTTT--GTTGCTAATA-ATTAGAGT--ATATTCCTC-AAAACTGCT  130

seq1  GATACTCCTGGATTGCTCATTCTTTCCCTACTTTGGATTTTTGTCAACTT  200
      |||||| ||||| |||||| ||||||||||| ||||| ||||||||||||
seq2  GATACT-CTGGA-TGCTCA-TCTTTCCCTAC-TTGGA-TTTTGTCAACTT  175

seq1  CCTATCATTCACTCAG-AAAATAATTATTTTTGGAGTTGTGCTTCTTATA  249
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCTATCATTCACTCAGAAAAATAATTATTTTTGGAGTTGTGCTTCTTATA  225

seq1  ACATATTTAGGAAGTACTACTTGACCATAAATGAGAGTTAGATACCCCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTAGGAAGTACTACTTGACCATAAATGAGAGTTAGATACCCCTA  275

seq1  ATATGTGTCCATGTGTCACACTGCATGGACATATAAGCATCATTTATCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTCCATGTGTCACACTGCATGGACATATAAGCATCATTTATCAG  325

seq1  AGTATACTTTAATATCTTATATGGAGAAACAGTAAGTAAATAGCAAGTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACTTTAATATCTTATATGGAGAAACAGTAAGTAAATAGCAAGTTT  375

seq1  ATATATAGAGAAATTTATTATTTTTACCTTTGTGCCTGATATATAGTAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGAGAAATTTATTATTTTTACCTTTGTGCCTGATATATAGTAGG  425

seq1  ACTTTTATAAAAAAAAATGCAATTATATTTCTAACATTCAACTGGTATAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATAAAAAAAAATGCAATTATATTTCTAACATTCAACTGGTATAC  475

seq1  TTTTTAAAGAAGGCTAAAGGCAAAAAGAAACCTAGTTTTATTATCAGGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGAAGGCTAAAGGCAAAAAGAAACCTAGTTTTATTATCAGGGT  525

seq1  TAATTTTCAAGTTGTATATCCTAACTCTTTCTTTATTTTGCACATTTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCAAGTTGTATATCCTAACTCTTTCTTTATTTTGCACATTTAAA  575

seq1  ACTTCATTGCATGACCTACGCCAGGCAATGTAGGAATGGGGAATTATCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTGCATGACCTACGCCAGGCAATGTAGGAATGGGGAATTATCTT  625

seq1  TTGACATCATTCTTTCTCCAGACATTCTGAGCTCTTATTCTGAGCTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATCATTCTTTCTCCAGACATTCTGAGCTCTTATTCTGAGCTTTCT  675

seq1  CTACCCGAAGCATCGCAAAGTTTTTATCAGGTCGTCTTAAGTGGTGCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCGAAGCATCGCAAAGTTTTTATCAGGTCGTCTTAAGTGGTGCTTT  725

seq1  ATGCTTAAGTTTTACTTCCCTATTGGACTTTTTCCCTTCAAGGTCACACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAAGTTTTACTTCCCTATTGGACTTTTTCCCTTCAAGGTCACACT  775

seq1  ATAGTAGAGTGGTGCTCTAAAGAATGGTGATCTTGAGTTTTGTTACAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGAGTGGTGCTCTAAAGAATGGTGATCTTGAGTTTTGTTACAAAC  825

seq1  TTCTATGTTAATTGTCAGCAAATGAACACACTAAGATTCATGTTTAAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTAATTGTCAGCAAATGAACACACTAAGATTCATGTTTAAATA  875

seq1  AGAAAGGTATAAAAATTAGTATTTTATAGCTCTATTCATGATGTAAAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTATAAAAATTAGTATTTTATAGCTCTATTCATGATGTAAAATT  925

seq1  AGGCTAACAATTTTCAATAAGCATGACAATAGTCTGAATATAATAATATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACAATTTTCAATAAGCATGACAATAGTCTGAATATAATAATATA  975

seq1  AACTAACATATCTATAAGAACATATAAACTGATTATCGTTTGGCTCTTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACATATCTATAAGAACATATAAACTGATTATCGTTTGGCTCTTAA  1025

seq1  AAAACATTGATGCGTTTTGTTTTGTTTTTTGGTTTTTGTTTTGGGTTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTGATGCGTTTTGTTTTGTTTTTTGGTTTTTGTTTTGGGTTTTT  1075

seq1  GTTTTGTTTTGATTTTTTTTTTTTTTTTGAGACAGGGTTTCATTGTATAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGATTTTTTTTTTTTTTTTGAGACAGGGTTTCATTGTATAG  1125

seq1  TCCTGGCTGACCTGGAATTC  1169
      ||||||||||||||||||||
seq2  TCCTGGCTGACCTGGAATTC  1145