BAC Information

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BAC

Clone NameB6Ng01-206E09
Chromosome7 (Build37)
Map Location 68,265,871 - 68,460,233
singlet/doubletdoublet
Overlap geneD0Kist2, LOC100041248, LOC100041259, EG664943
Upstream geneSnrpn, EG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287
Downstream geneB230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206E09.bB6Ng01-206E09.g
ACCGA025731GA025732
length1,2111,114
definitionB6Ng01-206E09.b B6Ng01-206E09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,265,871 - 68,267,097)(68,459,122 - 68,460,233)
sequence
gaattctgattatctagaaaatacttgagctagtttctattcaaaacata
cgactgggccttagaccaaggcaaacaaacatgcttttccattatgagtt
agggataggttgactctaagtctggcattctgctaaataacatatgggtt
aaatgaataaaatattccccgggttttcaattttttctttttgttcctat
ttagagatgtgtatcagggccttgtcatcgttggacatagaaatgtcttt
caggaataagaatcctccaagtcagtgagttttatctttcacttatgtct
ctgccaattttcttcactctgtccctgatgaaatatctacatcaatctgt
tgaaaggaatggggatattatatggatatgagaccagaaaaatagagagg
agcagtaggaagtattgtctttctatattggccttccaattattgttaat
tcatagataatcctgtataagacattagagctatgacacactgcctggtc
taatgagaattcatgtcaaagttccagctttcagcagtgagttgtctggc
tcatgctgttttgaataaaattatttataaaactgtttctgttcttcact
gtgtttttttagcctttgttaatactaaaaccttagtattctgggatcgt
cttggtgcataaatatagaacaggaaaaattatctggattataaaaataa
acaaacaaaaaatcaacaacaaaaaccgatagttactaaaataataaata
gaatgtatttaacttgatcccagatgctgggacaaaggcccaatctgtgt
acatgtagaacacccaaaaacaaaattgagaacattccttgatttttctt
tactgataatatcattctgagtaagattttacaaagaaaccatatcaaaa
agaggttcagaagccagagtcaaagaacctcatttaagcactagaattcc
agttgtgtttactgaagatattaaacataagtacagtaatgctgtagatt
cttgattttgaccactcttctcaccctgtgattaatattaaaggaatatt
aattattaaagattgttcagaacacatttgttagaatagtaaagtattag
aatagcaagtcttgaaataggaataaaaatcaggttatcgattctgcttt
gcttctttaactccataccaagacaaatttctggacttcatgcctagatt
ctgtaactgca

gaattcttgtcagtacatttctctgaatatgccataactccatgtacaca
tgaacaaaactatgcacatctgcattccctcctatgattcatttataagt
ctctaaccatttttattctttgaagacaagggcttattattttgggttaa
ataatccattctagttttctggatactgtatcaatgataaatctttggag
tttcttgtgaattttagatgagtttgactataagaccaaaagtacaatat
ctggactttggaaggaaaatactcttaatatctagtagtttcatcaatgt
gatgcgtcctaagaaatctaagattcaaagcaatgaagagaatattaaaa
tatatgtaggtgttacaattatcattattattttaaaaacacgtttatgg
ctaaattttatattgtttaataaaagttattcaattaacaactccttata
cgttcaggaacttcacaataaattttaatttatgttattagatattttct
tcatttacatttcaaatgttatcccttttcctggtttcccctccaaaaac
ctcctatccccttccccgttcccctgctcaacaacccaccctctctcact
tactgtccctggtattacactacattggggcttagagccttcacaggcaa
aagggcctctcaccccattgatgagcttttaggccatcctctattacata
tgcagatggacccattaatccccccatgtgtatgttcttgggagcaaatg
gctccattgtctgtacatcataaaaatctctcaaattattaatgatgcta
cattgtacttgcagagataagcttaatataaaaaccttatgagagccata
cattggacagtgatctatggaaaagttaagggaagaattgaaggcattca
ataatattgcaaccaaacataacatgtcaattaacaggcacccctggaag
ctcccagacagtgagctactactaatcacagatatacagtgactggcccc
agtcacatatgtagcaggtgctgcatcttgtcttcagattggaataggat
tggtgcctaaatactgcagatattgatgccaaagagtagagttatttgga
caggtctgtctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68265871_68267097
seq2: B6Ng01-206E09.b_44_1254

seq1  GAATTCTGATTATCTAGAAAATACTTGAGCTAGTTTCTATTCAAAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTATCTAGAAAATACTTGAGCTAGTTTCTATTCAAAACATA  50

seq1  CGACTGGGCCTTAGACCAAGGCAAACAAACATGCTTTTCCATTATGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGGGCCTTAGACCAAGGCAAACAAACATGCTTTTCCATTATGAGTT  100

seq1  AGGGATAGGTTGACTCTAAGTCTGGCATTCTGCTAAATAACATATGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAGGTTGACTCTAAGTCTGGCATTCTGCTAAATAACATATGGGTT  150

seq1  AAATGAATAAAATATTCCCCGGGTTTTCAATTTTTTCTTTTTGTTCCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATAAAATATTCCCCGGGTTTTCAATTTTTTCTTTTTGTTCCTAT  200

seq1  TTAGAGATGTGTATCAGGGCCTTGTCATCGTTGGACATAGAAATGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATGTGTATCAGGGCCTTGTCATCGTTGGACATAGAAATGTCTTT  250

seq1  CAGGAATAAGAATCCTCCAAGTCAGTGAGTTTTATCTTTCACTTATGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATAAGAATCCTCCAAGTCAGTGAGTTTTATCTTTCACTTATGTCT  300

seq1  CTGCCAATTTTCTTCACTCTGTCCCTGATGAAATATCTACATCAATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAATTTTCTTCACTCTGTCCCTGATGAAATATCTACATCAATCTGT  350

seq1  TGAAAGGAATGGGGATATTATATGGATATGAGACCAGAAAAATAGAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGAATGGGGATATTATATGGATATGAGACCAGAAAAATAGAGAGG  400

seq1  AGCAGTAGGAAGTATTGTCTTTCTATATTGGCCTTCCAATTATTGTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAGGAAGTATTGTCTTTCTATATTGGCCTTCCAATTATTGTTAAT  450

seq1  TCATAGATAATCCTGTATAAGACATTAGAGCTATGACACACTGCCTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATAATCCTGTATAAGACATTAGAGCTATGACACACTGCCTGGTC  500

seq1  TAATGAGAATTCATGTCAAAGTTCCAGCTTTCAGCAGTGAGTTGTCTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAATTCATGTCAAAGTTCCAGCTTTCAGCAGTGAGTTGTCTGGC  550

seq1  TCATGCTGTTTTGAATAAAATTATTTATAAAACTGTTTCTGTTCTTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGTTTTGAATAAAATTATTTATAAAACTGTTTCTGTTCTTCACT  600

seq1  GTGTTTTTTTAGCCTTTGTTAATACTAAAACCTTAGTATTCTGGGATCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTTTAGCCTTTGTTAATACTAAAACCTTAGTATTCTGGGATCGT  650

seq1  CTTGGTGCATAAATATAGAACAGGAAAAATTATCTGGATTATAAAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGCATAAATATAGAACAGGAAAAATTATCTGGATTATAAAAATAA  700

seq1  ACAAACAAAAAATCAACAACAAAAACCGATAGTTACTAAAATAATAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAAATCAACAACAAAAACCGATAGTTACTAAAATAATAAATA  750

seq1  GAATGTATTTAACTTGATCCCAGATGCTGGGACAAAGGCCCAATCTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATTTAACTTGATCCCAGATGCTGGGACAAAGGCCCAATCTGTGT  800

seq1  ACATGTAGAACACCCAAAAACAAAATTGAGAACATTCCTTGATTTTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAGAACACCCAAAAACAAAATTGAGAACATTCCTTGATTTTTCTT  850

seq1  TACTGATAATATCATTCTGAGTAAGATTTTACAAAGAAACCATATCAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATAATATCATTCTGAGTAAGATTTTACAAAGAAACCATATCAAAA  900

seq1  AGAGGTTCAGAAGCCAAGAGTCAAAGAACCTCATTTAAGCACTAGAATTC  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAGGTTCAGAAGCC-AGAGTCAAAGAACCTCATTTAAGCACTAGAATTC  949

seq1  CAGTTGTGTTTTACTGAAGAATATTAAACAATAAGTACAGTAATGCTGTA  1000
      |||||||| |||||||||| ||||||||| ||||||||||||||||||||
seq2  CAGTTGTG-TTTACTGAAG-ATATTAAAC-ATAAGTACAGTAATGCTGTA  996

seq1  GATTCTTGATTTTGA-CACTCTTCTCACACTGTGATTAAATATTAAA-GA  1048
      ||||||||||||||| |||||||||||| |||||||| ||||||||| ||
seq2  GATTCTTGATTTTGACCACTCTTCTCACCCTGTGATT-AATATTAAAGGA  1045

seq1  ATATTAAATATTAAAGAATGTTAAAGACACATTTGTAAGAAATAGTAAAG  1098
      ||||||| ||||||||| |||| |  |||||||||| || ||||||||||
seq2  ATATTAATTATTAAAGATTGTTCAGAACACATTTGTTAG-AATAGTAAAG  1094

seq1  TAAATTAGAAATAGCAAGTCTTGAAATAGGATAAAAAATCAGGTTATTCA  1148
      |  ||||| ||||||||||||||||||||||  ||||||||||||||   
seq2  T--ATTAG-AATAGCAAGTCTTGAAATAGGAATAAAAATCAGGTTAT--C  1139

seq1  GATTCTGCTTTGCTTCTTATACTCACATACAAAAGACAAATATTTCTGGA  1198
      ||||||||||||||||||  |||| |||||  |||||||  |||||||||
seq2  GATTCTGCTTTGCTTCTTTAACTC-CATAC-CAAGACAA--ATTTCTGGA  1185

seq1  CTTCATATTGTCTAGTATCTGTAACTGCA  1227
      |||||   || ||||  ||||||||||||
seq2  CTTCA---TGCCTAGATTCTGTAACTGCA  1211


seq1: chr7_68459122_68460233
seq2: B6Ng01-206E09.g_65_1178 (reverse)

seq1  AAAAG-CAGACCTGTCCAAATAACTCTACTCTTTGGCATCAATTATCTGC  49
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAGACAGACCTGTCCAAATAACTCTACTCTTTGGCATCAA-TATCTGC  49

seq1  AGTA-TTAGGCAC--ATCCTAT--CCATCTGAAGAC-AGATTGGCAGCAC  93
      |||| ||||||||  |||||||  | |||||||||| ||||  |||||| 
seq2  AGTATTTAGGCACCAATCCTATTCCAATCTGAAGACAAGAT--GCAGCA-  96

seq1  CCTGCTACATATGTGACTGGGGCCAGTCACTGTATATCTGTTGATTAGTA  143
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTGCTACATATGTGACTGGGGCCAGTCACTGTATATCTG-TGATTAGTA  145

seq1  GTAGCTCACTGTCTGGGAGCTTCCAGGGGTGCCTGTTAATTGACATGTTA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCACTGTCTGGGAGCTTCCAGGGGTGCCTGTTAATTGACATGTTA  195

seq1  TGTTTGGTTGCAATATTATTGAATGCCTTCAATTCTTCCCTTAACTTTTC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTTGCAATATTATTGAATGCCTTCAATTCTTCCCTTAACTTTTC  245

seq1  CATAGATCACTGTCCAATGTATGGCTCTCATAAGGTTTTTATATTAAGCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCACTGTCCAATGTATGGCTCTCATAAGGTTTTTATATTAAGCT  295

seq1  TATCTCTGCAAGTACAATGTAGCATCATTAATAATTTGAGAGATTTTTAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGCAAGTACAATGTAGCATCATTAATAATTTGAGAGATTTTTAT  345

seq1  GATGTACAGACAATGGAGCCATTTGCTCCCAAGAACATACACATGGGGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACAGACAATGGAGCCATTTGCTCCCAAGAACATACACATGGGGGG  395

seq1  ATTAATGGGTCCATCTGCATATGTAATAGAGGATGGCCTAAAAGCTCATC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGGGTCCATCTGCATATGTAATAGAGGATGGCCTAAAAGCTCATC  445

seq1  AATGGGGTGAGAGGCCCTTTTGCCTGTGAAGGCTCTAAGCCCCAATGTAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTGAGAGGCCCTTTTGCCTGTGAAGGCTCTAAGCCCCAATGTAG  495

seq1  TGTAATACCAGGGACAGTAAGTGAGAGAGGGTGGGTTGTTGAGCAGGGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACCAGGGACAGTAAGTGAGAGAGGGTGGGTTGTTGAGCAGGGGA  545

seq1  ACGGGGAAGGGGATAGGAGGTTTTTGGAGGGGAAACCAGGAAAAGGGATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGAAGGGGATAGGAGGTTTTTGGAGGGGAAACCAGGAAAAGGGATA  595

seq1  ACATTTGAAATGTAAATGAAGAAAATATCTAATAACATAAATTAAAATTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAAATGTAAATGAAGAAAATATCTAATAACATAAATTAAAATTT  645

seq1  ATTGTGAAGTTCCTGAACGTATAAGGAGTTGTTAATTGAATAACTTTTAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAAGTTCCTGAACGTATAAGGAGTTGTTAATTGAATAACTTTTAT  695

seq1  TAAACAATATAAAATTTAGCCATAAACGTGTTTTTAAAATAATAATGATA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATATAAAATTTAGCCATAAACGTGTTTTTAAAATAATAATGATA  745

seq1  ATTGTAACACCTACATATATTTTAATATTCTCTTCATTGCTTTGAATCTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAACACCTACATATATTTTAATATTCTCTTCATTGCTTTGAATCTT  795

seq1  AGATTTCTTAGGACGCATCACATTGATGAAACTACTAGATATTAAGAGTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCTTAGGACGCATCACATTGATGAAACTACTAGATATTAAGAGTA  845

seq1  TTTTCCTTCCAAAGTCCAGATATTGTACTTTTGGTCTTATAGTCAAACTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCCAAAGTCCAGATATTGTACTTTTGGTCTTATAGTCAAACTC  895

seq1  ATCTAAAATTCACAAGAAACTCCAAAGATTTATCATTGATACAGTATCCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAATTCACAAGAAACTCCAAAGATTTATCATTGATACAGTATCCA  945

seq1  GAAAACTAGAATGGATTATTTAACCCAAAATAATAAGCCCTTGTCTTCAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAGAATGGATTATTTAACCCAAAATAATAAGCCCTTGTCTTCAA  995

seq1  AGAATAAAAATGGTTAGAGACTTATAAATGAATCATAGGAGGGAATGCAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAAATGGTTAGAGACTTATAAATGAATCATAGGAGGGAATGCAG  1045

seq1  ATGTGCATAGTTTTGTTCATGTGTACATGGAGTTATGGCATATTCAGAGA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATAGTTTTGTTCATGTGTACATGGAGTTATGGCATATTCAGAGA  1095

seq1  AATGTACTGACAAGAATTC  1112
      |||||||||||||||||||
seq2  AATGTACTGACAAGAATTC  1114


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