BAC Information

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BAC

Clone NameB6Ng01-206K11
Chromosome7 (Build37)
Map Location 134,432,589 - 134,549,053
singlet/doubletdoublet
Overlap geneItgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764
Upstream geneSbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2
Downstream geneZfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206K11.bB6Ng01-206K11.g
ACCGA026015GA026016
length2711,123
definitionB6Ng01-206K11.b B6Ng01-206K11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,432,589 - 134,432,859)(134,547,929 - 134,549,053)
sequence
ttcctgactcaaacactcaaatgttggaattacagtcgtgtgccaccatg
cctagctgtcagaagtttacgaagctgaagaaggccacactcaggtgtct
gaaggtaatatagcagtcccactgagggagaagagctgaattatgactac
gagttccagggagggtcaaagaaaagtctgaagagaaggaatgaggatga
gagatagttcaaaggacatgataactgaccaggaaggggtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtg
gaattcaagccacggtcctaagggcagacaagcgtcacgggtgccatttg
tgtgggaagagttttgcccagcggcccacattggtggagcacctgtacac
tcacacaggtgaaaagccgtttcagtgcccagactgcaacaaatgcttcg
gccgggcttcttccctgaccatgcaccgagccatacaccgaggggaacgg
ccgcatcagtgtcctgactgtgggaagagttttacccagcggtccacatt
ggtggcacacatgtatactcacacaggtgaaaaaccattttgttgccccg
actgcaacaaatccttcagccggtcttcttccctgagctctcaccgggcc
atacacagaggggaacggcctcattgttgccctgactgtggccgagcctt
cacacgtcgctctggcctcattgcccatctccgtatccacactggggaga
agccttactgttgtgctgattgtggacgctgcttcagccagagatctgcg
ttccgtgagcaccagcgggtggtacacagtggtgtgacccccttcacttg
cactcactgtggcagagcctttgcggattccaaatatcttcggcgccaca
tgcgcatccatacaggtgaaaagccttattcatgccctgattgtggtcgc
tgctttcgccagagctctgaaattccagcccataggaggacccacactgg
cgagcgtccttacccctgccctcaatgtggcaggcagtttcgcacaaagt
cagctatgacaagccaccagtgggtccatagaccaggagctaaaggccat
aaaggacaaaaaagcccgtcagttatctatatccctggaccctagacaag
agggacccggatccacctgtgggcttctagcattacccagagatattcag
aaagtgtgggtgatggtcttaaaggcgtcaacatagagggtgagattatg
tacattgtttggaggtccagagggttgaacctatgtcatcttccggagtc
acagacgttcttaggtactgctggtctgggcaccggtacagtctttttgg
tgatttctagatgcatctgcaccactccggatgtactgtcgtctttaatt
ctatgggctggctgggcacctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134432589_134432859
seq2: B6Ng01-206K11.b_49_319

seq1  TTCCTGACTCAAACACTCAAATGTTGGAATTACAGTCGTGTGCCACCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGACTCAAACACTCAAATGTTGGAATTACAGTCGTGTGCCACCATG  50

seq1  CCTAGCTGTCAGAAGTTTACGAAGCTGAAGAAGGCCACACTCAGGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTGTCAGAAGTTTACGAAGCTGAAGAAGGCCACACTCAGGTGTCT  100

seq1  GAAGGTAATATAGCAGTCCCACTGAGGGAGAAGAGCTGAATTATGACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAATATAGCAGTCCCACTGAGGGAGAAGAGCTGAATTATGACTAC  150

seq1  GAGTTCCAGGGAGGGTCAAAGAAAAGTCTGAAGAGAAGGAATGAGGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGGAGGGTCAAAGAAAAGTCTGAAGAGAAGGAATGAGGATGA  200

seq1  GAGATAGTTCAAAGGACATGATAACTGACCAGGAAGGGGTGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGTTCAAAGGACATGATAACTGACCAGGAAGGGGTGTGTGTGTGT  250

seq1  GTGTGTGTGTGTGTGTGTGTG  271
      |||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTG  271

seq1: chr7_134547929_134549053
seq2: B6Ng01-206K11.g_69_1191 (reverse)

seq1  GTAGGGTTGCCCAGCCCAGCCCAATAGATGTAAAGACGACAGTACATCCG  50
      |||||  ||||||| ||||||| |||||  ||||||||||||||||||||
seq2  GTAGG--TGCCCAG-CCAGCCC-ATAGAATTAAAGACGACAGTACATCCG  46

seq1  GAGTGTGTGCAGATGCATCTAGAAATCACCAAAAAGACTGTACCCGGTGC  100
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  GAGTG-GTGCAGATGCATCTAGAAATCACCAAAAAGACTGTA-CCGGTGC  94

seq1  CCAGACCAGCAGTACCT-AGAACGTCTGTGACTTCCGGAAGATGACATAG  149
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  CCAGACCAGCAGTACCTAAGAACGTCTGTGAC-TCCGGAAGATGACATAG  143

seq1  GTTCAACCCTCTGGACCT-CAAACAATGTACAT-ATCTCACCCTCTATGT  197
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  GTTCAACCCTCTGGACCTCCAAACAATGTACATAATCTCACCCTCTATGT  193

seq1  TGACGCCTTTAAGACCATCACCCACACTTTCTGAATATCTCTGGGTAATG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCCTTTAAGACCATCACCCACACTTTCTGAATATCTCTGGGTAATG  243

seq1  CTAGAAGCCCACAGGTGGATCCGGGT-CCTCTTGTCTAGGGTCCAGGGAT  296
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTAGAAGCCCACAGGTGGATCCGGGTCCCTCTTGTCTAGGGTCCAGGGAT  293

seq1  ATAGATAACTGACGGGCTTTTTTGTCC-TTATGGCCTTTAGCTCCTGGTC  345
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATAGATAACTGACGGGCTTTTTTGTCCTTTATGGCCTTTAGCTCCTGGTC  343

seq1  TATGGACCCACTGGTGGCTTGTCATAGCTGACTTTGTGCGAAACTGCCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACCCACTGGTGGCTTGTCATAGCTGACTTTGTGCGAAACTGCCTG  393

seq1  CCACATTGAGGGCAGGGGTAAGGACGCTCGCCAGTGTGGGTCCTCCTATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTGAGGGCAGGGGTAAGGACGCTCGCCAGTGTGGGTCCTCCTATG  443

seq1  GGCTGGAATTTCAGAGCTCTGGCGAAAGCAGCGACCACAATCAGGGCATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAATTTCAGAGCTCTGGCGAAAGCAGCGACCACAATCAGGGCATG  493

seq1  AATAAGGCTTTTCACCTGTATGGATGCGCATGTGGCGCCGAAGATATTTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGCTTTTCACCTGTATGGATGCGCATGTGGCGCCGAAGATATTTG  543

seq1  GAATCCGCAAAGGCTCTGCCACAGTGAGTGCAAGTGAAGGGGGTCACACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCGCAAAGGCTCTGCCACAGTGAGTGCAAGTGAAGGGGGTCACACC  593

seq1  ACTGTGTACCACCCGCTGGTGCTCACGGAACGCAGATCTCTGGCTGAAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTACCACCCGCTGGTGCTCACGGAACGCAGATCTCTGGCTGAAGC  643

seq1  AGCGTCCACAATCAGCACAACAGTAAGGCTTCTCCCCAGTGTGGATACGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTCCACAATCAGCACAACAGTAAGGCTTCTCCCCAGTGTGGATACGG  693

seq1  AGATGGGCAATGAGGCCAGAGCGACGTGTGAAGGCTCGGCCACAGTCAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGCAATGAGGCCAGAGCGACGTGTGAAGGCTCGGCCACAGTCAGG  743

seq1  GCAACAATGAGGCCGTTCCCCTCTGTGTATGGCCCGGTGAGAGCTCAGGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAATGAGGCCGTTCCCCTCTGTGTATGGCCCGGTGAGAGCTCAGGG  793

seq1  AAGAAGACCGGCTGAAGGATTTGTTGCAGTCGGGGCAACAAAATGGTTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACCGGCTGAAGGATTTGTTGCAGTCGGGGCAACAAAATGGTTTT  843

seq1  TCACCTGTGTGAGTATACATGTGTGCCACCAATGTGGACCGCTGGGTAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGTGAGTATACATGTGTGCCACCAATGTGGACCGCTGGGTAAA  893

seq1  ACTCTTCCCACAGTCAGGACACTGATGCGGCCGTTCCCCTCGGTGTATGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCCCACAGTCAGGACACTGATGCGGCCGTTCCCCTCGGTGTATGG  943

seq1  CTCGGTGCATGGTCAGGGAAGAAGCCCGGCCGAAGCATTTGTTGCAGTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTGCATGGTCAGGGAAGAAGCCCGGCCGAAGCATTTGTTGCAGTCT  993

seq1  GGGCACTGAAACGGCTTTTCACCTGTGTGAGTGTACAGGTGCTCCACCAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTGAAACGGCTTTTCACCTGTGTGAGTGTACAGGTGCTCCACCAA  1043

seq1  TGTGGGCCGCTGGGCAAAACTCTTCCCACACAAATGGCACCCGTGACGCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCCGCTGGGCAAAACTCTTCCCACACAAATGGCACCCGTGACGCT  1093

seq1  TGTCTGCCCTTAGGACCGTGGCTTGAATTC  1125
      ||||||||||||||||||||||||||||||
seq2  TGTCTGCCCTTAGGACCGTGGCTTGAATTC  1123