BAC Information

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BAC

Clone NameB6Ng01-207J20
Chromosome7 (Build37)
Map Location 106,818,359 - 107,002,195
singlet/doubletdoublet
Overlap geneSlco2b1, Olfr520, Olfr521, Neu3, Spcs2
Upstream geneLOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190
Downstream geneXrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207J20.bB6Ng01-207J20.g
ACCGA026714GA026715
length978782
definitionB6Ng01-207J20.b B6Ng01-207J20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,818,359 - 106,819,330)(107,001,180 - 107,002,195)
sequence
gaattcagtcagtcccttttcctgggaatgctgggaaatttggggggcta
gattatagttaccccaacatcgaatcttagaaaactggcaaaaaaattgg
aaccaattccttcctgctacacatgtctttggtgaagcgtaaaggatcct
ttggataatacctttgtaaatggtattaaacagcagcaccacttactgtt
caaatgtgaataagaataaaaaggtgtgatcataggaaaaaacctatacc
ttacataagtggtttttaaaattgtagacaggtgctatctgtgtgtgtct
catcctattcgacatgtcaatccttgagaaaggtgaagcatatattacca
acccagtctgtatatgaggaaactcagttcagagacagaaaacaacctcc
gaagaccgtacaatgaccagtgtctggcaggctttccgtcagggtcgttt
gacttgcctggacacagcaagtactcaatcaatgtctacaggatcgagtt
ctttagaaaacgctgcctagtccctctgtggcctccggtaactgcctgat
tgatttccttgtgtcaggatcaggttagcatgaagtttctgtcagtgagt
ctatttcttactgtactgagaaattatccagggaaaccaaggcccacaga
gaagccaggaacaagaaccaaaaaggcccccagctttctacccatgctac
agcctggagatttagtgagactttactcagggcttcctgcttgcaggctt
agaggaaattgggacacaagctttgtccttcaggagttctctgcttatgg
tggaggatgggtaaagacaggctgagctgagacagaaagctgagacagaa
gctccaagggttgctgagagccaagaggatggaagggatcctggtgggat
ccaggcacagaaggacagaagggttcttggaacttgacctaatgggacaa
gaaagatagtgatgaacccttgaggaga
gaattctagaactcactgtgtgaccagcctggccttgaactcaagttgat
ttgtgtgcctgtgccttccagagtgctaagactaaagacgagtacctgac
tttgttgttcttaggcggggtctcctgtgttgtaggttggcctctagcct
cccaagtgctgggattagcattgatttatgtgatgctgggggttgaacct
agggcttcctgcgcgccaggcaagccctctactggctgaactatgtcctg
cctcctcatcgtttccagccttatcgctcagatggactggcatcatttga
gggatatttaagctgtagtgtccatgaactgaggctgtccccacagaact
gcagcagtgtaggcttcctgagtcaaggggccagactgggaccacagaga
aagcagtggggggaattttttccctcagtttctctggagttgccactaat
gtgcatgttcataatttaattgacacatggtaatttctaacctccaagta
actcataaatgcaaccactaataagcactcgtataccagcaatttccatt
acagtatttcttggcccttaaaaaaaacccttgaaattgaaggttcaaag
tgctaacagctggaatctcggcttggtgatatcatgggattttcaaagtg
tatctaaattaagcaactgtattttcaagatacacatcattttctttccc
aaattaacatttccccctttatttttgcgcttgttactcttgatcttgct
aaatgtgtgtttatggaaggtggggggtagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106818359_106819330
seq2: B6Ng01-207J20.b_45_1022

seq1  GAATTCAGTCAGTCCCTTTTCCTGGGAATGCTGGGAAATTTGGGGGGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAGTCCCTTTTCCTGGGAATGCTGGGAAATTTGGGGGGCTA  50

seq1  GATTATAGTTACCCCAACATCGAATCTTAGAAAACTGGCAAAAAAATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAGTTACCCCAACATCGAATCTTAGAAAACTGGCAAAAAAATTGG  100

seq1  AACCAATTCCTTCCTGCTACACATGTCTTTGGTGAAGCGTAAAGGATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATTCCTTCCTGCTACACATGTCTTTGGTGAAGCGTAAAGGATCCT  150

seq1  TTGGATAATACCTTTGTAAATGGTATTAAACAGCAGCACCACTTACTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAATACCTTTGTAAATGGTATTAAACAGCAGCACCACTTACTGTT  200

seq1  CAAATGTGAATAAGAATAAAAAGGTGTGATCATAGGAAAAAACCTATACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGAATAAGAATAAAAAGGTGTGATCATAGGAAAAAACCTATACC  250

seq1  TTACATAAGTGGTTTTTAAAATTGTAGACAGGTGCTATCTGTGTGTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAAGTGGTTTTTAAAATTGTAGACAGGTGCTATCTGTGTGTGTCT  300

seq1  CATCCTATTCGACATGTCAATCCTTGAGAAAGGTGAAGCATATATTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTATTCGACATGTCAATCCTTGAGAAAGGTGAAGCATATATTACCA  350

seq1  ACCCAGTCTGTATATGAGGAAACTCAGTTCAGAGACAGAAAACAACCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTCTGTATATGAGGAAACTCAGTTCAGAGACAGAAAACAACCTCC  400

seq1  GAAGACCGTACAATGACCAGTGTCTGGCAGGCTTTCCGTCAGGGTCGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCGTACAATGACCAGTGTCTGGCAGGCTTTCCGTCAGGGTCGTTT  450

seq1  GACTTGCCTGGACACAGCAAGTACTCAATCAATGTCTACAGGATCGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCCTGGACACAGCAAGTACTCAATCAATGTCTACAGGATCGAGTT  500

seq1  CTTTAGAAAACGCTGCCTAGTCCCTCTGTGGCCTCCGGTAACTGCCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAAACGCTGCCTAGTCCCTCTGTGGCCTCCGGTAACTGCCTGAT  550

seq1  TGATTTCCTTGTGTCAGGATCAGGTTAGCATGAAGTTTCTGTCAGTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTTGTGTCAGGATCAGGTTAGCATGAAGTTTCTGTCAGTGAGT  600

seq1  CTATTTCTTACTGTACTGAGAAATTATCCAGGGAAACCAAGGCCCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTTACTGTACTGAGAAATTATCCAGGGAAACCAAGGCCCACAGA  650

seq1  GAAGCCAGGAACAAGAACCAAAAAGGCCCCCAGCTTTCTACCCATGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGGAACAAGAACCAAAAAGGCCCCCAGCTTTCTACCCATGCTAC  700

seq1  AGCCTGGAGATTTAGTGAGACTTTACTCAGGGCTTCCTGCTTGCAGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAGATTTAGTGAGACTTTACTCAGGGCTTCCTGCTTGCAGGCTT  750

seq1  AGAGGAAATTGGGACACAAGCTTTGTCCTTCAGGAGTTCTCTGCTTATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAATTGGGACACAAGCTTTGTCCTTCAGGAGTTCTCTGCTTATGG  800

seq1  TGGAGGATGGGTAAAGACAGGCTGAGCTGAGACAG-AAGCTGAGACAGAA  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGAGGATGGGTAAAGACAGGCTGAGCTGAGACAGAAAGCTGAGACAGAA  850

seq1  GCTCCAAGGG-TGCTGAGAGCCAAGAGGATGG-AGGGATCCTGGTGGGAT  897
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  GCTCCAAGGGTTGCTGAGAGCCAAGAGGATGGAAGGGATCCTGGTGGGAT  900

seq1  CCAGGCACAG-AGGACAGAAGGGCTCTTGG-ACATGACCTAATGGGACAA  945
      |||||||||| |||||||||||| |||||| || ||||||||||||||||
seq2  CCAGGCACAGAAGGACAGAAGGGTTCTTGGAACTTGACCTAATGGGACAA  950

seq1  GAAAGATAGTGATGAACCC-TGAGGAGA  972
      ||||||||||||||||||| ||||||||
seq2  GAAAGATAGTGATGAACCCTTGAGGAGA  978

seq1: chr7_107001180_107002195
seq2: B6Ng01-207J20.g_67_848 (reverse)

seq1  ATCTACCACAACTAGAGCTCTTAGATGACTGATCTGCACCATCATGCCAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCAAGAGAAGGGGCACAGGAGGAAAAGGATGAAGCCTCCTGTGTACAC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TAGGTTTGAGGTGTTCAAGCTCTGTAACTGTATTTTACCTTTGACTCCAG  150
                                                        
seq2  --------------------------------------------------  0

seq1  AATTTTCTAACCAGTAATAAGCAGATAAAGAAACTAATACTCACTCAGAG  200
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGTGAGACTGCTTGGGTTTAAGTACATCTTAATACATCTA-CCCCCAC  249
                                           ||||| |||||||
seq2  -------------------------------------ATCTACCCCCCAC  13

seq1  CTTCCATAAACACACATTTAGCAAGATCAAGAGTAACAAGCGCAAAAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAAACACACATTTAGCAAGATCAAGAGTAACAAGCGCAAAAATA  63

seq1  AAGGGGGAAATGTTAATTTGGG-AAGAAAATGATGTGTATCTTGAAAATA  348
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGGGGGAAATGTTAATTTGGGAAAGAAAATGATGTGTATCTTGAAAATA  113

seq1  CAGTTGCTTAATTTAGATACACTTTG-AAATCCCATGATATCACCAAGCC  397
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGTTGCTTAATTTAGATACACTTTGAAAATCCCATGATATCACCAAGCC  163

seq1  GAGATTCCAGCTGTTAGCACTTTGAACCTTCAATTTCAAGGGTTTTTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCCAGCTGTTAGCACTTTGAACCTTCAATTTCAAGGGTTTTTTTT  213

seq1  AAGGGCCAAGAAATACTGTAATGGAAATTGCTGGTATACGAGTGCTTATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCAAGAAATACTGTAATGGAAATTGCTGGTATACGAGTGCTTATT  263

seq1  AGTGGTTGCATTTATGAGTTACTTGGAGGTTAGAAATTACCATGTGTCAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTGCATTTATGAGTTACTTGGAGGTTAGAAATTACCATGTGTCAA  313

seq1  TTAAATTATGAACATGCACATTAGTGGCAACTCCAGAGAAACTGAGGGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTATGAACATGCACATTAGTGGCAACTCCAGAGAAACTGAGGGAA  363

seq1  AAAATTCCCCCCACTGCTTTCTCTGTGGTCCCAGTCTGGCCCCTTGACTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCCCCCACTGCTTTCTCTGTGGTCCCAGTCTGGCCCCTTGACTC  413

seq1  AGGAAGCCTACACTGCTGCAGTTCTGTGGGGACAGCCTCAGTTCATGGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCCTACACTGCTGCAGTTCTGTGGGGACAGCCTCAGTTCATGGAC  463

seq1  ACTACAGCTTAAATATCCCTCAAATGATGCCAGTCCATCTGAGCGATAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCTTAAATATCCCTCAAATGATGCCAGTCCATCTGAGCGATAAG  513

seq1  GCTGGAAACGATGAGGAGGCAGGACATAGTTCAGCCAGTAGAGGGCTTGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAACGATGAGGAGGCAGGACATAGTTCAGCCAGTAGAGGGCTTGC  563

seq1  CTGGCGCGCAGGAAGCCCTAGGTTCAACCCCCAGCATCACATAAATCAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGCGCAGGAAGCCCTAGGTTCAACCCCCAGCATCACATAAATCAAT  613

seq1  GCTAATCCCAGCACTTGGGAGGCTAGAGGCCAACCTACAACACAGGAGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATCCCAGCACTTGGGAGGCTAGAGGCCAACCTACAACACAGGAGAC  663

seq1  CCCGCCTAAGAACAACAAAGTCAGGTACTCGTCTTTAGTCTTAGCACTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCTAAGAACAACAAAGTCAGGTACTCGTCTTTAGTCTTAGCACTCT  713

seq1  GGAAGGCACAGGCACACAAATCAACTTGAGTTCAAGGCCAGGCTGGTCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCACAGGCACACAAATCAACTTGAGTTCAAGGCCAGGCTGGTCAC  763

seq1  ACAGTGAGTTCTAGAATTC  1016
      |||||||||||||||||||
seq2  ACAGTGAGTTCTAGAATTC  782