BAC Information

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BAC

Clone NameB6Ng01-207N13
Chromosome7 (Build37)
Map Location 147,083,099 - 147,083,984
singlet/doubletsinglet
Overlap geneKndc1
Upstream geneBnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229
Downstream geneUtf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N13.bB6Ng01-207N13.g
ACCGA026886GA026887
length935888
definitionB6Ng01-207N13.b B6Ng01-207N13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggtcatcatggcctacgtagagagaacttgtctccccaaacc
aaatgtgcaatagcggcacaattgttatgggaataatcaaacactttttg
attggatttaaggcctattccataaaataaaactcacatatggcactgct
aatgtgaccaagaacctgagactggataggacatatgcctagggggagac
ccactagtattactctgctaaaggaacataagaacacagtgcctcctctt
gacatattgctatactcacagaaaagaacatcactcagccctcgtcggag
aagctgcttcttccagaagatgttaattaacaaagagatccacaattaga
cactgtgcagagagggatttttggaacactaagccttaaatagaatcctt
ttatcaaatccctctcttcaaggctcagggatatatgcagaagaggcaac
aagaagactgtaagagccagaagtattggatgcctccaagaaaacagtgt
cttccagacacaaccagactgatgcacatatgcactcacagaagctctga
cagcatgcacaagactggtacaggttcaaaccagacaaaaatcccagcac
cgaaaaggaaaagtcgacttaaattagcatgcctaaccaaggagctattt
gcaattcacaccttttgggactaggaattctccaatggagtataactgga
tgtatctaccacaccccagggcaggcctcatgcccaagagtagttggcca
acacgaggatttttgtgctgtttttgtttggtttcagcattttttttttt
ctcttactgattttctttaagtttgttttgagttttggcttttgtgcttt
gttgggtttcctggttttgttttgttttgttttgttctgtttgtttgctt
tggtttgttttgtgagagagagaagaacatgaagt
gaattctctctactacaaccaaaaaataaaatcctacagacttcaaggga
tccctaaatatctttaccctctcatggctcaaagaaaatccaaatggctt
gagaacatgctgtctaatcccttgataactggtagagggctaaacaggct
cactgaagaccttaccatgatggtcagagatgacactggacgtgatatgt
gtgagcaggtccttcctctgtggtgggggtgggaaatgcccattagaaaa
catcttgtcattttcttgtgatgaagagtccagcacctgctcccagcgat
ttctccagagaatcaagtcacatgatcaggccacgtgtctatgagaaaac
ccactgaacacttagaactcatcatgaatagttcagcatgtcccattagg
ttgtggaggctgaagccatgctgtgtctcctggtcttttagaccaaaaca
gcaagaagaatctcctggatgcacagtcgagatactctgaccaagaatta
tgcaaggtggacttcttgaaggagatggtctttcctggattcaacatgga
acatcagtctttctggacatggaaagtggagtcagagacaaaatagtaag
actggagtctagagccatagttgctggaaaggcaggcatgcaaatggctg
tggccgagggcccagcaagtactgatcaagaggtaggtgataaaactgga
cttcaggagtgcagtgtagtactgggtttgggaattgaagatggcaccat
tgtggtgtcagcagagttctcactgttcctaagccaatggaaagcctccc
ataacccccctggtgctggacaggccttgggactgaaaatgacagagacc
cacacagagattctcccataaagaaaggggtattccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147083099_147083984
seq2: B6Ng01-207N13.g_65_952

seq1  GAATTCTCTCTACTACAACCAAAAAATAAAATCCTACAGACTTCAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTACTACAACCAAAAAATAAAATCCTACAGACTTCAAGGGA  50

seq1  TCCCTAAATATCTTTACCCTCTCATGGCTCAAAGAAAATCCAAATGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAATATCTTTACCCTCTCATGGCTCAAAGAAAATCCAAATGGCTT  100

seq1  GAGAACATGCTGTCTAATCCCTTGATAACTGGTAGAGGGCTAAACAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATGCTGTCTAATCCCTTGATAACTGGTAGAGGGCTAAACAGGCT  150

seq1  CACTGAAGACCTTACCATGATGGTCAGAGATGACACTGGACGTGATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGACCTTACCATGATGGTCAGAGATGACACTGGACGTGATATGT  200

seq1  GTGAGCAGGTCCTTCCTCTGTGGTGGGGGTGGGAAATGCCCATTAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAGGTCCTTCCTCTGTGGTGGGGGTGGGAAATGCCCATTAGAAAA  250

seq1  CATCTTGTCATTTTCTTGTGATGAAGAGTCCAGCACCTGCTCCCAGCGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTCATTTTCTTGTGATGAAGAGTCCAGCACCTGCTCCCAGCGAT  300

seq1  TTCTCCAGAGAATCAAGTCACATGATCAGGCCACGTGTCTATGAGAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAGAATCAAGTCACATGATCAGGCCACGTGTCTATGAGAAAAC  350

seq1  CCACTGAACACTTAGAACTCATCATGAATAGTTCAGCATGTCCCATTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAACACTTAGAACTCATCATGAATAGTTCAGCATGTCCCATTAGG  400

seq1  TTGTGGAGGCTGAAGCCATGCTGTGTCTCCTGGTCTTTTAGACCAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAGGCTGAAGCCATGCTGTGTCTCCTGGTCTTTTAGACCAAAACA  450

seq1  GCAAGAAGAATCTCCTGGATGCACAGTCGAGATACTCTGACCAAGAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGAATCTCCTGGATGCACAGTCGAGATACTCTGACCAAGAATTA  500

seq1  TGCAAGGTGGACTTCTTGAAGGAGATGGTCTTTCCTGGATTCAACATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGTGGACTTCTTGAAGGAGATGGTCTTTCCTGGATTCAACATGGA  550

seq1  ACATCAGTCTTTCTGGACATGGAAAGTGGAGTCAGAGACAAAATAGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGTCTTTCTGGACATGGAAAGTGGAGTCAGAGACAAAATAGTAAG  600

seq1  ACTGGAGTCTAGAGCCATAGTTGCTGGAAAGGCAGGCATGCAAATGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGTCTAGAGCCATAGTTGCTGGAAAGGCAGGCATGCAAATGGCTG  650

seq1  TGGCCGAGGGCCCAGC-AGTACTGATCAAGAGGTAGGTGATAAAACTGGA  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGCCGAGGGCCCAGCAAGTACTGATCAAGAGGTAGGTGATAAAACTGGA  700

seq1  CTTCAGGAGTGCAGTGTAGTACT-GGTTTGGGAA-TGAAGATGGCACCAT  747
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  CTTCAGGAGTGCAGTGTAGTACTGGGTTTGGGAATTGAAGATGGCACCAT  750

seq1  TG-GGTGTCAGCAGAGTTCTCACTGTTCCTAAGCCAATGGAAAGCCTCCC  796
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTCAGCAGAGTTCTCACTGTTCCTAAGCCAATGGAAAGCCTCCC  800

seq1  ATAA-CCCCCTGGTGCTGGACAGGCCTTGGGGACTGAAAATGAACAGAGA  845
      |||| ||||||||||||||||||||||| ||||||||||||| |||||||
seq2  ATAACCCCCCTGGTGCTGGACAGGCCTT-GGGACTGAAAATG-ACAGAGA  848

seq1  CCCACAGCAGAGATTCTCCCATAAAGAAAGGGGTATTCCCA  886
      |||||| ||||||||||||||||||||||||||||||||||
seq2  CCCACA-CAGAGATTCTCCCATAAAGAAAGGGGTATTCCCA  888