BAC Information

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BAC

Clone NameB6Ng01-207O09
Chromosome7 (Build37)
Map Location 90,432,731 - 90,433,847
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207O09.bB6Ng01-207O09.g
ACCGA026923GA026924
length1,1351,184
definitionB6Ng01-207O09.b B6Ng01-207O09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatccagtggactaaaggtggggtgacaatcaaagggaaatag
ttatctggaggccaaagtgtgttgtctgaccttaccaaccctctctaccc
agcatctctggatttcatagctaacattgtaatgcaggcacctcagtcac
tgttgaagaaacaggctccttgaacagttgcctggctcctaaggaccaca
taactgctaagcaccagagacagcttcacacccctgttgtggctccatag
caaaccttctttagatcccagtgtgctaatttctccagcaaaaatgccct
tttattaaaaaaaatcacattaatacagtttacaaagttgctagtccaca
aaactgacaaacatgcaagaaatgggtggtagggattagctctcatgagt
ggaggatacacaactcaatttgtcctagagatactccaagcacataaaac
aaaagatgtttttatacaagtttcaactgtatgtctgtctttaggacttc
aacctgagaaaatgattctgtaaattttgcattgaaaaggttcagggaag
cctcattaaaagtaatcatgcattagaaatagctctgatttgcaaagcta
aataaaacagattagtaaacagtgctagattttcgctttagcatataata
tcacgaaaaagtgtctagaagaaatgttatgtcatgctacattaagaaag
aaaaatatatatagactaatcacaacattgtgattgtagatatgtatatt
ttatatgtgcacatacatatatgtatatacactagaaaagaaatatgcca
cagtaataacaggatgatttctgcttacttagttttaatttactgtgtaa
taaatctaataacatcagactattttaatagtttaaagaaaaaatttgag
tctaaaacagtggttctcaaccctgtgggggttgctacctcttttgaggg
ggttctaagatcattgtaaaacagattatttacatttattaatttcaata
atagtagccaaaatttatagtcatgaagtagcagggaaaatcatattttg
gttgggttttacttaactacatggagacctgcaataaaacggttggcagc
actaggcaggcttgatagcactgatctagaggcgg
gaattctcacctgaggaataccgaatggctgagaaacacatgaaaagatg
ttcagcatccttaatcatcagggacatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcttgatgtggagaaagaggaacactccttcattgttggtgg
gattacaagcttatacaaccactctggaaatcagtctggtggtttctcag
aaaattggacatggtactaccggaggatcctgcaatacctctcctgggca
tatatccagaagatgttcaaactagtaagaaagaaacatgcttcactatg
ttcatagcagccttatttataatagccagaagctggcaagaacccagatg
cccctcaacaaaggaatggatacaaaaatgtggtacatttacacaatgga
gtactactcagctgttaaaaagaatgaatttatgaaattcctaggcaaat
ggttggacctggagggcattatcctgagtgaggtaacccaatcacaaaag
aactcaaatgatatgtactcactgataagtgaatattagcccagaaactt
agaatacccaatatataagttacaattttcaaaacacatgaaactcaaga
agaacgaaaaccaaagtgtgggcactttgccccttcttataattgggaat
aaaacacccatggaaggaggtacagagacaaaatttggagctgcacaaaa
ggatggaccgtctagagactgccatatccagggatccatcccataatcat
cctccaaacgttgacaccattgcatacactagcaagattgtgctgaaagg
acccagatatagctgtctctttgtgagactatgctggggcctagcaacac
ataagtgggatgccccacagtcagcttattgggcagatcaacagggcccc
caaatggaggagctaagagaaaaatactaaggagcttcaaagggatctgc
aaaccctataggtgcaacaaacattatgaaactaaccagtaccccagaag
ctctggacttcttagcctgccatatgttctcaaaagaatggcctagtctg
caattcactggtaaaggagagaatccattggaaatgcaccttatatgcca
gtacaggggcaacgcccaggggtccaaaaagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90432731_90433847
seq2: B6Ng01-207O09.b_50_1184

seq1  GAATTCAAATCCAGTGGACTAAAGGTGGGGTGACAATCAAAGGGAAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCAGTGGACTAAAGGTGGGGTGACAATCAAAGGGAAATAG  50

seq1  TTATCTGGAGGCCAAAGTGTGTTGTCTGACCTTACCAACCCTCTCTACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGGAGGCCAAAGTGTGTTGTCTGACCTTACCAACCCTCTCTACCC  100

seq1  AGCATCTCTGGATTTCATAGCTAACATTGTAATGCAGGCACCTCAGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTCTGGATTTCATAGCTAACATTGTAATGCAGGCACCTCAGTCAC  150

seq1  TGTTGAAGAAACAGGCTCCTTGAACAGTTGCCTGGCTCCTAAGGACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGAAACAGGCTCCTTGAACAGTTGCCTGGCTCCTAAGGACCACA  200

seq1  TAACTGCTAAGCACCAGAGACAGCTTCACACCCCTGTTGTGGCTCCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTAAGCACCAGAGACAGCTTCACACCCCTGTTGTGGCTCCATAG  250

seq1  CAAACCTTCTTTAGATCCCAGTGTGCTAATTTCTCCAGCAAAAATGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTTCTTTAGATCCCAGTGTGCTAATTTCTCCAGCAAAAATGCCCT  300

seq1  TTTATTAAAAAAAATCACATTAATACAGTTTACAAAGTTGCTAGTCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAAAAAAAATCACATTAATACAGTTTACAAAGTTGCTAGTCCACA  350

seq1  AAACTGACAAACATGCAAGAAATGGGTGGTAGGGATTAGCTCTCATGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACAAACATGCAAGAAATGGGTGGTAGGGATTAGCTCTCATGAGT  400

seq1  GGAGGATACACAACTCAATTTGTCCTAGAGATACTCCAAGCACATAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATACACAACTCAATTTGTCCTAGAGATACTCCAAGCACATAAAAC  450

seq1  AAAAGATGTTTTTATACAAGTTTCAACTGTATGTCTGTCTTTAGGACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTTTTTATACAAGTTTCAACTGTATGTCTGTCTTTAGGACTTC  500

seq1  AACCTGAGAAAATGATTCTGTAAATTTTGCATTGAAAAGGTTCAGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGAAAATGATTCTGTAAATTTTGCATTGAAAAGGTTCAGGGAAG  550

seq1  CCTCATTAAAAGTAATCATGCATTAGAAATAGCTCTGATTTGCAAAGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTAAAAGTAATCATGCATTAGAAATAGCTCTGATTTGCAAAGCTA  600

seq1  AATAAAACAGATTAGTAAACAGTGCTAGATTTTCGCTTTAGCATATAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACAGATTAGTAAACAGTGCTAGATTTTCGCTTTAGCATATAATA  650

seq1  TCACGAAAAAGTGTCTAGAAGAAATGTTATGTCATGCTACATTAAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAAAAAGTGTCTAGAAGAAATGTTATGTCATGCTACATTAAGAAAG  700

seq1  AAAAATATATATAGACTAATCACAACATTGTGATTGTAGATATGTATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATATATAGACTAATCACAACATTGTGATTGTAGATATGTATATT  750

seq1  TTATATGTGCACATACATATATGTATATACACTAG-AAAGAAATATGCCA  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTATATGTGCACATACATATATGTATATACACTAGAAAAGAAATATGCCA  800

seq1  CAGTAATAACAGGATGATTTCTGCTTACTTAGTTTTAATTTACTGTGTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATAACAGGATGATTTCTGCTTACTTAGTTTTAATTTACTGTGTAA  850

seq1  TAAATCTAATAACATCAGACTA-TTTAATAG-TTAAAGAAAAAATTTGAG  897
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TAAATCTAATAACATCAGACTATTTTAATAGTTTAAAGAAAAAATTTGAG  900

seq1  TCTAAAACAGTGGTTCTCAA-CCTGT-GGGGTTGCTACCTC-TTTGAGGG  944
      |||||||||||||||||||| ||||| |||||||||||||| ||||||||
seq2  TCTAAAACAGTGGTTCTCAACCCTGTGGGGGTTGCTACCTCTTTTGAGGG  950

seq1  GGTTCTAAGATCATTGTAAAACAGA-TATTTACATT--ATAATT--CATA  989
      ||||||||||||||||||||||||| ||||||||||   |||||   |||
seq2  GGTTCTAAGATCATTGTAAAACAGATTATTTACATTTATTAATTTCAATA  1000

seq1  ATAGTAGC--AAAATTATAGTCATGAAGTAGCAAGGAAAATAATATTTTG  1037
      ||||||||  ||| ||||||||||||||||||| ||||||| ||||||||
seq2  ATAGTAGCCAAAATTTATAGTCATGAAGTAGCAGGGAAAATCATATTTTG  1050

seq1  GTTGGG-TTTACT--ACAACATGAGGAACTGCATTAAA--GGGTTGCAGC  1082
      |||||| ||||||  || |||||  || ||||| ||||  || | |||||
seq2  GTTGGGTTTTACTTAACTACATGGAGACCTGCAATAAAACGGTTGGCAGC  1100

seq1  ACTAGGAAGGCTGAGAAGCACTGATCTAGAGGCGG  1117
      |||||| |||||    |||||||||||||||||||
seq2  ACTAGGCAGGCTTGATAGCACTGATCTAGAGGCGG  1135