BAC Information

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BAC

Clone NameB6Ng01-208E23
Chromosome7 (Build37)
Map Location 8,140,632 - 8,141,855
singlet/doubletsinglet
Overlap geneLOC100042681
Upstream geneBC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949
Downstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208E23.bB6Ng01-208E23.g
ACCGA027226GA027227
length1,1971,184
definitionB6Ng01-208E23.b B6Ng01-208E23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtcagccaggactatacaatgaaaccctgtctcaaaaaaaa
aaaaaaaatcaaaacaaaacaaaaacccaaaacaaaaaccaaaaaacaaa
acaaaacgcatcaatgttttttaagagccaaacgataatcagtttatatg
ttcttatagatatgttagtttatattattatattcagactattgtcatgc
ttattgaaaattgttagcctaattttacatcatgaatagagctataaaat
actaatttttatacctttcttatttaaacatgaatcttaatgtgttcatt
tgctgacaattaacatagaagtttgtaacaaaactcaagatcaccattct
ttagagcaccactctactataatgtgaccttgaagggaaaaagtccaata
gggaagtaaaacttaagcataaagcaccacttaagacgacctgataaaaa
ctttgcgatgcttcgggtagagaaagctcagaataagagctcagaatgtc
tggagaaagaatgatgtcaaaagataattccccattcctacattgcctgg
cgtaggtcatgcaatgaagttttaaatgtgcaaaataaagaaagagttag
gatatacaacttgaaaattaaccctgataataaaactaggtttctttttg
cctttagccttctttaaaaagtataccagttgaatgttagaaatataatt
gcattttttttttataaaagtcctactatatatcaggcacaaaggtaaaa
ataataaatttctctatatataaacttgctatttacttactgtttctcca
tataagatattaaagtatactctgataaatgatgcttatatgtccatgca
gtgtgacacatggacacatattaggggtatctaactctcatttatggtca
agtagtacttcctaaatatgttataaggagcacaactccaaaataattat
tttctgagtgaatgataggaagttgacaaaaatccaaagtagggaaagaa
tggagcaatcaggagtatcagcagttttggaggaatataactctatatat
agcaacaaacggagattggtctcatcccagaaactcaaatctgtctacaa
atagatggaatagtcagtcgagcatggttgtctcattggatcaatgtcaa
tggaatgatttaaaatcttaggtccaagctgagacattcagtacata
gaattctacgcaaatttattcttttttatttattttttattttttaatta
gatatttactttatttgcatttcaaatgctatcccaaaaggctacccttc
ccccgccctgctccccaacccacccactcctgcttcctgaccctggcatt
ttcctctactagggaatataatcttcataagaccaagagcctctcctccc
aatgatggccgagtaggccaacttctgctaaatatgcagctaaagacttg
aggtctgtgggtactggttagttcatatagttgttcctactattgggttg
cagacccctttagttccttgggtacattctctagttcctccattgggggc
cctatgttccatccaatagatgacactgagcatccacttctggatttgcc
aggtactggtagagcctcacaagagacaggtatatcagggtcctgtcaga
aactgttgctagcataggcaatagtgtcttataaaaatttataaaaattt
actgtcttatatgatatacataaatagttaatataaaatttatataaata
tatacttctataattataatatatgatatataaaattataatatacaaat
aatataaaaatatataaatgtataaagtcatatatacaatatatatacta
aagtcttatataatatatatattcacatttaatataaaataatgtgaata
tataattacataattataatatataccctatttaaagtataatatggaaa
taatattaatatataatatataaatatatgtttatataaataataaatag
tgtcttataaaaacataaaaaaacacttaaacttgtagtagagaatgtgg
ggaaaaacctcaagggatatgggtccagagggaaaattcctgaacagaac
agcagtggcttatgctgtaacatcaaaaattgacaaatgagacctcataa
aactgcaagcttctgttagtcaaagtatgtagtaggacaaacatcacaaa
cagattgggtgtcagagaccatcccgtgagaagtgagccctttcacattc
ttccctaacagacaattggcttgtactaggagctgggttatcaccccttc
cttcctatttctttcttggcactgaggctgtaagccttaaagtgaagttc
cccctcttttcgtaatcctccttctccgtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8140632_8141855
seq2: B6Ng01-208E23.b_47_1243

seq1  GAATTCCAGGTCAGCCAGGACTATACAATGAAACCCTGTCTCAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCCAGGACTATACAATGAAACCCTGTCTCAAAAAAAA  50

seq1  AAAAAAAATCAAAACAAAACAAAAACCCAAAACAAAAACCAAAAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATCAAAACAAAACAAAAACCCAAAACAAAAACCAAAAAACAAA  100

seq1  ACAAAACGCATCAATGTTTTTTAAGAGCCAAACGATAATCAGTTTATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACGCATCAATGTTTTTTAAGAGCCAAACGATAATCAGTTTATATG  150

seq1  TTCTTATAGATATGTTAGTTTATATTATTATATTCAGACTATTGTCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATAGATATGTTAGTTTATATTATTATATTCAGACTATTGTCATGC  200

seq1  TTATTGAAAATTGTTAGCCTAATTTTACATCATGAATAGAGCTATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAAATTGTTAGCCTAATTTTACATCATGAATAGAGCTATAAAAT  250

seq1  ACTAATTTTTATACCTTTCTTATTTAAACATGAATCTTAATGTGTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTTTATACCTTTCTTATTTAAACATGAATCTTAATGTGTTCATT  300

seq1  TGCTGACAATTAACATAGAAGTTTGTAACAAAACTCAAGATCACCATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGACAATTAACATAGAAGTTTGTAACAAAACTCAAGATCACCATTCT  350

seq1  TTAGAGCACCACTCTACTATAATGTGACCTTGAAGGGAAAAAGTCCAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCACCACTCTACTATAATGTGACCTTGAAGGGAAAAAGTCCAATA  400

seq1  GGGAAGTAAAACTTAAGCATAAAGCACCACTTAAGACGACCTGATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTAAAACTTAAGCATAAAGCACCACTTAAGACGACCTGATAAAAA  450

seq1  CTTTGCGATGCTTCGGGTAGAGAAAGCTCAGAATAAGAGCTCAGAATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCGATGCTTCGGGTAGAGAAAGCTCAGAATAAGAGCTCAGAATGTC  500

seq1  TGGAGAAAGAATGATGTCAAAAGATAATTCCCCATTCCTACATTGCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGAATGATGTCAAAAGATAATTCCCCATTCCTACATTGCCTGG  550

seq1  CGTAGGTCATGCAATGAAGTTTTAAATGTGCAAAATAAAGAAAGAGTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGTCATGCAATGAAGTTTTAAATGTGCAAAATAAAGAAAGAGTTAG  600

seq1  GATATACAACTTGAAAATTAACCCTGATAATAAAACTAGGTTTCTTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAACTTGAAAATTAACCCTGATAATAAAACTAGGTTTCTTTTTG  650

seq1  CCTTTAGCCTTCTTTAAAAAGTATACCAGTTGAATGTTAGAAATATAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGCCTTCTTTAAAAAGTATACCAGTTGAATGTTAGAAATATAATT  700

seq1  GCATTTTTTTTTTATAAAAGTCCTACTATATATCAGGCACAAAGGTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTTTTTTATAAAAGTCCTACTATATATCAGGCACAAAGGTAAAA  750

seq1  ATAATAAATTTCTCTATATATAAACTTGCTATTTACTTACTGTTTCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATTTCTCTATATATAAACTTGCTATTTACTTACTGTTTCTCCA  800

seq1  TATAAGATATTAAAGTATACTCTGATAAATGATGCTTATATGTCCATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATATTAAAGTATACTCTGATAAATGATGCTTATATGTCCATGCA  850

seq1  GTGTGACACATGGACACATATTAGGGGTATCTAACTCTCATTTATGGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACACATGGACACATATTAGGGGTATCTAACTCTCATTTATGGTCA  900

seq1  AGTAGTACTTCCTAAATATGTTATAAGAAGCACAACTCCAAAAATAATTA  950
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  AGTAGTACTTCCTAAATATGTTATAAGGAGCACAACTCC-AAAATAATTA  949

seq1  TTTTCTGAGTGAATGATAGGAAGTTGACAAAAATCCAAAGTAGGGAAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGAGTGAATGATAGGAAGTTGACAAAAATCCAAAGTAGGGAAAGA  999

seq1  AT-GAGCAATCCAGGAGTATCAGCAGTTTTTGAGGAATATTAACTCTAAT  1049
      || ||||||| ||||||||||||||||||| |||||||| ||||||| ||
seq2  ATGGAGCAAT-CAGGAGTATCAGCAGTTTTGGAGGAATA-TAACTCT-AT  1046

seq1  ATATTAGCAAACAAAACGGAGAATTGGTCTCATCCCAGAAACCTCAAAAA  1099
      ||| ||||||   |||||||| ||||||||||||||||||| ||||||  
seq2  ATA-TAGCAA--CAAACGGAG-ATTGGTCTCATCCCAGAAA-CTCAAA--  1089

seq1  TCCTGTCTAC-AATAGATGGAATAGTCAAGTCGAAGCAATGAGTTGGTCT  1148
        |||||||| |||||||||||||||| ||||| ||| ||| ||| ||||
seq2  -TCTGTCTACAAATAGATGGAATAGTC-AGTCG-AGC-ATG-GTT-GTCT  1133

seq1  CATTTGGGATCAAATGTCAATGTGATTGTATTATAATTCTTATGCTCCCA  1198
      ||||  ||||| |||||||||| || || |||  || ||||| |   |||
seq2  CATT--GGATC-AATGTCAATG-GAATG-ATTTAAAATCTTAGG--TCCA  1176

seq1  AGGCCTGAGGACATTCAGTTTACATA  1224
      ||  |||| |||||||||  ||||||
seq2  AG--CTGA-GACATTCAG--TACATA  1197