BAC Information

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BAC

Clone NameB6Ng01-210B03
Chromosome7 (Build37)
Map Location 21,336,738 - 21,337,278
singlet/doubletsinglet
Overlap geneLOC100043559
Upstream geneBcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936
Downstream geneLOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210B03.bB6Ng01-210B03.g
ACCGA028510GA028511
length1,176535
definitionB6Ng01-210B03.b B6Ng01-210B03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacagccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggtttgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
aaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcatatgcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgggagactatgccggggcctagcaaac
acagaagtggatgctcatagtcagctaatggatggatcacagggctccca
gtggagagctagagaaagtacccaaggagctaaagggatctgcaacctat
agtgacacattatgaactaaccagtaccccgagcttcttgactctagctg
catatgttatcaaaagaatggcctagtcgcatcactggaaagaagggtca
attgacaccgcaactttatattgcctcagtacaggacgccagtccaaaag
ggggatggccggttaggaattggggg
tgactgagctgaatactcccttagtgtgtgacctaatatttgtttacatc
attttgttacatatatataaatgcttatatatgcagcatgtgcatatata
tgtatacatatgtgtctccatatgtatatatacattcatgtgtacatata
cattacaagtgtttatgtgtgtctgtgtgtatatgtgtatacgcatcatg
ttcatgcaatgctcactgaggcctaaaaagggcaatggatctcttcattt
gtgttagagttggcttggagataccatgtgggtgctgagaattgaaccca
tgtccttttaaatttcaaccactgatccattactccagcaccacggtaac
caagtttcagactctgtgttactttataaagggatcaatgggtcgaggaa
aagaaaaaccccattcctttgtaaagtctacataccaatagccaactctc
ttttaaaaggtgtgttgtaggtatgtttgtgtctatttgtgtagtgtgtg
tgcatggtgaatgtatatgtgagtgtgtatgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21336738_21337278
seq2: B6Ng01-210B03.g_65_605

seq1  GAATTCTGACTGAGCTGAATACTCCCTTAGTGTGTGACCTAATATTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTGAGCTGAATACTCCCTTAGTGTGTGACCTAATATTTGTT  50

seq1  TACATCATTTTGTTACATATATATAAATGCTTATATATGCAGCATGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATTTTGTTACATATATATAAATGCTTATATATGCAGCATGTGCA  100

seq1  TATATATGTATACATATGTGTCTCCATATGTATATATACATTCATGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTATACATATGTGTCTCCATATGTATATATACATTCATGTGTA  150

seq1  CATATACATTACAAGTGTTTATGTGTGTCTGTGTGTATATGTGTATACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACATTACAAGTGTTTATGTGTGTCTGTGTGTATATGTGTATACGC  200

seq1  ATCATGTTCATGCAATGCTCACTGAGGCCTAAAAAGGGCAATGGATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTTCATGCAATGCTCACTGAGGCCTAAAAAGGGCAATGGATCTCT  250

seq1  TCATTTGTGTTAGAGTTGGCTTGGAGATACCATGTGGGTGCTGAGAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTGTTAGAGTTGGCTTGGAGATACCATGTGGGTGCTGAGAATTG  300

seq1  AACCCATGTCCTTTTAAATTTCAACCACTGATCCATTACTCCAGCACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATGTCCTTTTAAATTTCAACCACTGATCCATTACTCCAGCACCAC  350

seq1  GGTAACCAAGTTTCAGACTCTGTGTTACTTTATAAAGGGATCAATGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCAAGTTTCAGACTCTGTGTTACTTTATAAAGGGATCAATGGGTC  400

seq1  GAGGAAAAGAAAAACCCCATTCCTTTGTAAAGTCTACATACCAATAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAGAAAAACCCCATTCCTTTGTAAAGTCTACATACCAATAGCCA  450

seq1  ACTCTCTTTTAAAAGGTGTGTTGTAGGTATGTTTGTGTCTATTTGTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTTTAAAAGGTGTGTTGTAGGTATGTTTGTGTCTATTTGTGTAG  500

seq1  TGTGTGTGCATGGTGAATGTATATGTGAGTGTGTATGTGTA  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCATGGTGAATGTATATGTGAGTGTGTATGTGTA  541