BAC Information

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BAC

Clone NameB6Ng01-210D08
Chromosome7 (Build37)
Map Location 25,871,224 - 26,039,490
singlet/doubletdoublet
Overlap genePou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf
Upstream geneZfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574
Downstream geneCic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210D08.bB6Ng01-210D08.g
ACCGA028609GA028610
length685901
definitionB6Ng01-210D08.b B6Ng01-210D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,871,224 - 25,871,907)(26,038,851 - 26,039,490)
sequence
gaattctccatccaacccattgtcaactcttattttaaaggtctttttag
ttccctctggggagaacccagggtaggacatgggcagtattggctggttc
cctggcttcttggttcttattgaaggctgtatgctagagagctaacagtc
ctaagcattatctatccatccatccatccatccatctatctatgtacgta
tgtatgtatgtttgtatgtatgtaaacagtgagctgggtctcactgtagc
cctggttgccctggtactctatgtaagagaggctggccacagactgccag
ctgcttcctcctgagtgctgggattaaaggtgaccatcactgcatctagc
tgtctgaatcatttaaccattccattcagtttcacaaccccaggagttgt
cctgtgtctactataaaatggcagaactgagttttggacacaggaatttg
aattattcctaaattcccccaagttttctgaatgtaattaaaaaaaaaaa
tcaggccttctaagcactgtgtggttaggagtgggttgttttcttgtttg
ttttgagacattctcttttatattttgttttaaaatgtaggagttccctg
tctgcatgtacacctgcattccagcagagggcatcagatccctttataga
tgggtcgtgtgggccaccttgtggttgggggtggg
gaattccgcttgctttgtaggagaggctagccctaaactccagctttcag
ccttccaagaactcagattacatctgcagtttttgtctgtatgcatagat
gtgactacaagatcggctgggttggtctcaaatcacttatctacctaaag
atgaccttgatcttccaatcctccagccttcacttcccatgtgcaggaat
tgcacgtggatgcatttcctgtttcccttgggtcaggacttcttgcatga
gaggtaagcactagagtatctgagctacatctttagcatggcctggaccc
cttttactccagcagtactttttgaagctggagagatggcttgagggttc
agagcaaaggctgctcttccagaggactcaggtttaattcccagcaacca
cagggcagcgttcaactctcaaccatccttgactggatttaggtttaggg
tatctgacaccctcttctgatcttttgggcaccaggccacatgtgatacg
cagacattcatgcagtcaacatacacagtacatagaaaataatagtaata
ataataataataatagttatttttaaaaggacttaacttagtgcattgca
agagtgcaacaatgggcatggtggttaatcaatacccacctttttgtttg
attgagacaggggtcttgctatatattccaaagtggctttaaacttagga
tactctgtctcagccacccagacaccagggtttccaggatacatcatcaa
tttcacagagccagtgacatctgttttctgtgtgtcttgtaaggcatagg
gtgctcacatccaattgaggtcgatggtcactctgcatatatatatatat
tatatatatatatttatattatattttatattatatattttttatatttg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25871224_25871907
seq2: B6Ng01-210D08.b_40_724

seq1  GAATTCTCCATCCAACCCATTGTCAACTCTTATTTTAAAGGTCTTTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCCAACCCATTGTCAACTCTTATTTTAAAGGTCTTTTTAG  50

seq1  TTCCCTCTGGGGAGAACCCAGGGTAGGACATGGGCAGTATTGGCTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTGGGGAGAACCCAGGGTAGGACATGGGCAGTATTGGCTGGTTC  100

seq1  CCTGGCTTCTTGGTTCTTATTGAAGGCTGTATGCTAGAGAGCTAACAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCTTGGTTCTTATTGAAGGCTGTATGCTAGAGAGCTAACAGTC  150

seq1  CTAAGCATTATCTATCCATCCATCCATCCATCCATCTATCTATGTACGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCATTATCTATCCATCCATCCATCCATCCATCTATCTATGTACGTA  200

seq1  TGTATGTATGTTTGTATGTATGTAAACAGTGAGCTGGGTCTCACTGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATGTTTGTATGTATGTAAACAGTGAGCTGGGTCTCACTGTAGC  250

seq1  CCTGGTTGCCCTGGTACTCTATGTAAGAGAGGCTGGCCACAGACTGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTGCCCTGGTACTCTATGTAAGAGAGGCTGGCCACAGACTGCCAG  300

seq1  CTGCTTCCTCCTGAGTGCTGGGATTAAAGGTGACCATCACTGCATCTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCTCCTGAGTGCTGGGATTAAAGGTGACCATCACTGCATCTAGC  350

seq1  TGTCTGAATCATTTAACCATTCCATTCAGTTTCACAACCCCAGGAGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAATCATTTAACCATTCCATTCAGTTTCACAACCCCAGGAGTTGT  400

seq1  CCTGTGTCTACTATAAAATGGCAGAACTGAGTTTTGGACACAGGAATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCTACTATAAAATGGCAGAACTGAGTTTTGGACACAGGAATTTG  450

seq1  AATTATTCCTAAATTCCCCCAAGTTTTCTGAATGTAATTAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCCTAAATTCCCCCAAGTTTTCTGAATGTAATTAAAAAAAAAAA  500

seq1  TCAGGCCTTCTAAGCACTGTGTGGTTAGGAGTGGGTTGTTTTCTTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCTTCTAAGCACTGTGTGGTTAGGAGTGGGTTGTTTTCTTGTTTG  550

seq1  TTTTGAGACATTCTCTTTTATATTTTGTTTTAAAATGTAGGAGTTCCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGACATTCTCTTTTATATTTTGTTTTAAAATGTAGGAGTTCCCTG  600

seq1  TCTGCATGTACACCTGCATTCCAGCAGAGGGCATCAGATCCCTTTATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATGTACACCTGCATTCCAGCAGAGGGCATCAGATCCCTTTATAGA  650

seq1  T-GGTCGTGTGGGCCACCTTGTGGTTGGGGGTGGG  684
      | |||||||||||||||||||||||||||||||||
seq2  TGGGTCGTGTGGGCCACCTTGTGGTTGGGGGTGGG  685

seq1: chr7_26038851_26039490
seq2: B6Ng01-210D08.g_321_970 (reverse)

seq1  GCAAATAT-ATATATATAT-ATAT-ATATAT-ATATATATATATATATAT  46
      |||||||| | | |||||| |||| | |||| ||||| ||||||||||||
seq2  GCAAATATAAAAAATATATAATATAAAATATAATATAAATATATATATAT  50

seq1  -ATATATATATATATGCAGAGTGACCATCGACCTCA--TTGATGTGAGCA  93
       |||||||||||||||||||||||||||||||||||  | ||||||||||
seq2  AATATATATATATATGCAGAGTGACCATCGACCTCAATTGGATGTGAGCA  100

seq1  CCCTATGCCTTAC-AGACACACAG-AAACAGATGTCACTGGCTCTGTGAA  141
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  CCCTATGCCTTACAAGACACACAGAAAACAGATGTCACTGGCTCTGTGAA  150

seq1  ATTGATGATGTATCCTGGAAACCCTGGTGTCTGGGTGGCTGAGACAGAGT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGATGTATCCTGGAAACCCTGGTGTCTGGGTGGCTGAGACAGAGT  200

seq1  ATCCTAAGTTTAAAGCCACTTTGGAATATATAGCAAGA-CCCTGTCTCAA  240
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCCTAAGTTTAAAGCCACTTTGGAATATATAGCAAGACCCCTGTCTCAA  250

seq1  TCAAACAAAAAGGTGGGTATTGATTAACCACCATGCCCATTGTTGCACTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAAAAAGGTGGGTATTGATTAACCACCATGCCCATTGTTGCACTC  300

seq1  TTGCAATGCACTAAGTTAAGTCCTTTTAAAAATAACTATTATTATTATTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATGCACTAAGTTAAGTCCTTTTAAAAATAACTATTATTATTATTA  350

seq1  TTATTACTATTATTTTCTATGTACTGTGTATGTTGACTGCATGAATGTCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTATTATTTTCTATGTACTGTGTATGTTGACTGCATGAATGTCT  400

seq1  GCGTATCACATGTGGCCTGGTGCCCAAAAGATCAGAAGAGGGTGTCAGAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATCACATGTGGCCTGGTGCCCAAAAGATCAGAAGAGGGTGTCAGAT  450

seq1  ACCCTAAACCTAAATCCAGTCAAGGATGGTTGAGAGTTGAACGCTGCCCT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAACCTAAATCCAGTCAAGGATGGTTGAGAGTTGAACGCTGCCCT  500

seq1  GTGGTTGCTGGGAATTAAACCTGAGTCCTCTGGAAGAGCAGCCTTTGCTC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCTGGGAATTAAACCTGAGTCCTCTGGAAGAGCAGCCTTTGCTC  550

seq1  TGAACCCTCAAGCCATCTCTCCAGCTTCAAAAAGTACTGCTGGAGTAAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCTCAAGCCATCTCTCCAGCTTCAAAAAGTACTGCTGGAGTAAAA  600

seq1  GGGGTCCAGGCCATGCTAAAGATGTAGCTCAGATACTCTAGTGCTTACCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCAGGCCATGCTAAAGATGTAGCTCAGATACTCTAGTGCTTACCT  650