BAC Information

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BAC

Clone NameB6Ng01-210H02
Chromosome7 (Build37)
Map Location 99,206,302 - 99,403,057
singlet/doubletdoublet
Overlap geneDlg2
Upstream genenone
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210H02.bB6Ng01-210H02.g
ACCGA028779GA028780
length1,1951,146
definitionB6Ng01-210H02.b B6Ng01-210H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,401,864 - 99,403,057)(99,206,302 - 99,207,462)
sequence
gaattctttaccatttttcatgggggattttcttagagattctccacact
tgacccattctcctacatgattttatgaaagtttctgttaagacatcttc
atgcttccacttgtactggttttcttatttgctccacattgctagatgac
tactaacttaaagactaacttttctttgtccttagcagagtactgaagta
cttttaattttcccctaagaaacctacttctgccctttgcagttatataa
aataactttatggtctctcatctcctcaaaagtctttcctgcacttgaat
gatgtcactgtgactgtagttcttttagtggaacaaccaggactgacttg
actcatcttaagctgatgtggtctgcagacctttttaccaaagtagatgc
ctttagacatagataactgtagctaatgatactccctcccaaatatacta
agtacaaggcaccactgtgggctgaaaaactgtgatactcaagtgaaggt
ccacagcttgctctaagtgttcataactggaaggtgcagagttcaagggt
aggatatccatctgttgacactccccatccagcttctaactatagcaaag
acctagatatagtgctacatgcattatgtaataccagtatctagaaggag
acttagccaggaattcaaggatatcctaggcctctttgatagcctcaaat
tagaagggggaaaaaaagagaacaaacaatatgctctcattccagccctg
tttgcctgtgatcaataattttccaggtcaaaacatacaatgagactagc
ctaagcaaactgactgtactgaccacctttcagttccctcagcaacctgc
cttttgataataaacatgtgctgtgcttatgggcatatgtcaagacaaat
aaataaaaaataggaatagaggagattttaagaaaaataaattacttata
aagttttcatgttttgcctttggtgggtgtttaagaataaccctttcctt
ggcatgtccaatgagttttcaaggggcatttttcatcattgccctttgaa
atgaatattgtcatttaaagtgatctgccagtgctgtcttcccatctaat
atagctggctgaggaatttgaccatcagaactgacatgtgctgctgcctg
gatgctggccttgatggtaatgcacttcctgattcctaggtaggc

gaattccaggaaagctaatgttaaggagcacgaaggaaaatgaatgctca
tataccaattaagggcacaggaatactctctaagtatacaaaagggacta
caactacaatgcaaataaatacaaatagaattacaattataattacaatc
acagatgggaaaataacactagaaaaggccaacagagggagagtcagggc
tttgaggaaaaaatagtaatttaactaaagtcaagaactttcaataaaat
caccatttagactatttctatgtatcagaacagtgaggctctgaatattt
gttagaggaaagtgctgtgttcatgccagtgtccaaagctgatgctaaaa
tgccaccatataaagacagaaagctgatccaagattttaagaatggcata
cccaagagagccttgaggcagctttagttctaaaggtagatatttgggca
aaagtaggtcaatgagagaaatgaagtttccctattggaaaaatctgaat
gtgaaccactaacctggagctactttgcttaatgaggaaaggggaagcac
tagaaaattcatgagttaactactcactatatacagatttctggagaatt
attaagtaattagaactggcagcaagaaaaggctgcaagaacattttcac
aagacaataagtaaatatccccagaaaagacagttgaatgatgcttcaac
cacaagtttcaaggatcccacaaaggttagaggttagtgaaatatttgta
tatctctatattttatcactgaaggtgaattacatccattcattgtagct
aacagtgaatgtatttatgttagtgtgctgtaatttttttctgtaataat
tcttcagacaccgtaagtacgtaggaacttctgaaattctattagcaagg
tttatgggaagtcttgccatttgaatagccactgccaagcacctgatgac
agttaccaatagcactaattatttcaatttagtagctaccaaaaaaaagg
taaattattgccttttactcaggaacagctttctaatgacagtcttgagt
tggatcaggccagtgacactgaccttccccctttcattggttttgaatac
acagtcattgaactgggattcctagctgttgtcgtgctggacaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99401864_99403057
seq2: B6Ng01-210H02.b_42_1236 (reverse)

seq1  GCCTACTAGGGAATCAGAAAGTGCATTACCATCAA-GCCAGCATCCA-GC  48
      ||||||   |||||||| ||||||||||||||||| ||||||||||| ||
seq2  GCCTACCTAGGAATCAGGAAGTGCATTACCATCAAGGCCAGCATCCAGGC  50

seq1  AGCAGCACATGTCAG-TCTGAATGTCAAA-TCCTCAGACAGCTATAATAA  96
      ||||||||||||||| |||||  |||||| ||||||| |||||||| || 
seq2  AGCAGCACATGTCAGTTCTGATGGTCAAATTCCTCAGCCAGCTATATTA-  99

seq1  GAATGGGAAAGACAGCACTGGCAGATCACCTTTAAATGACAATAATTCAA  146
        ||||| |||||||||||||||||||| |||||||||||||| |||| |
seq2  -GATGGG-AAGACAGCACTGGCAGATCA-CTTTAAATGACAAT-ATTC-A  144

seq1  TTTCAAAGGGCAAATGAATGAAAAATG-CCCTTGAAAACTCATTGGACAT  195
      ||||||||||| |||| |||||||||| ||||||||||||||||||||||
seq2  TTTCAAAGGGC-AATG-ATGAAAAATGCCCCTTGAAAACTCATTGGACAT  192

seq1  GCCAA-GAAAAGGTTAT--CTAAACA-CCACCAAAGGCAAAACATGAAAA  241
      ||||| |||| ||||||   |||||| |||||||||||||||||||||||
seq2  GCCAAGGAAAGGGTTATTCTTAAACACCCACCAAAGGCAAAACATGAAAA  242

seq1  CTTTATAAGTAATTTATTTTTCTTAAAATCTCCTCTATTCCTATTTTTTA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAAGTAATTTATTTTTCTTAAAATCTCCTCTATTCCTATTTTTTA  292

seq1  TTTATTTGTCTTGACATATGCCCATAAGCACAGCACATGTTTATTATCAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTCTTGACATATGCCCATAAGCACAGCACATGTTTATTATCAA  342

seq1  AAGGCAGGTTGCTGAGGGAACTGAAAGGTGGTCAGTACAGTCAGTTTGCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGTTGCTGAGGGAACTGAAAGGTGGTCAGTACAGTCAGTTTGCT  392

seq1  TAGGCTAGTCTCATTGTATGTTTTGACCTGGAAAATTATTGATCACAGGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAGTCTCATTGTATGTTTTGACCTGGAAAATTATTGATCACAGGC  442

seq1  AAACAGGGCTGGAATGAGAGCATATTGTTTGTTCTCTTTTTTTCCCCCTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGGCTGGAATGAGAGCATATTGTTTGTTCTCTTTTTTTCCCCCTT  492

seq1  CTAATTTGAGGCTATCAAAGAGGCCTAGGATATCCTTGAATTCCTGGCTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGAGGCTATCAAAGAGGCCTAGGATATCCTTGAATTCCTGGCTA  542

seq1  AGTCTCCTTCTAGATACTGGTATTACATAATGCATGTAGCACTATATCTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTTCTAGATACTGGTATTACATAATGCATGTAGCACTATATCTA  592

seq1  GGTCTTTGCTATAGTTAGAAGCTGGATGGGGAGTGTCAACAGATGGATAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTGCTATAGTTAGAAGCTGGATGGGGAGTGTCAACAGATGGATAT  642

seq1  CCTACCCTTGAACTCTGCACCTTCCAGTTATGAACACTTAGAGCAAGCTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCTTGAACTCTGCACCTTCCAGTTATGAACACTTAGAGCAAGCTG  692

seq1  TGGACCTTCACTTGAGTATCACAGTTTTTCAGCCCACAGTGGTGCCTTGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTTCACTTGAGTATCACAGTTTTTCAGCCCACAGTGGTGCCTTGT  742

seq1  ACTTAGTATATTTGGGAGGGAGTATCATTAGCTACAGTTATCTATGTCTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTATATTTGGGAGGGAGTATCATTAGCTACAGTTATCTATGTCTA  792

seq1  AAGGCATCTACTTTGGTAAAAAGGTCTGCAGACCACATCAGCTTAAGATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATCTACTTTGGTAAAAAGGTCTGCAGACCACATCAGCTTAAGATG  842

seq1  AGTCAAGTCAGTCCTGGTTGTTCCACTAAAAGAACTACAGTCACAGTGAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTCAGTCCTGGTTGTTCCACTAAAAGAACTACAGTCACAGTGAC  892

seq1  ATCATTCAAGTGCAGGAAAGACTTTTGAGGAGATGAGAGACCATAAAGTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCAAGTGCAGGAAAGACTTTTGAGGAGATGAGAGACCATAAAGTT  942

seq1  ATTTTATATAACTGCAAAGGGCAGAAGTAGGTTTCTTAGGGGAAAATTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATATAACTGCAAAGGGCAGAAGTAGGTTTCTTAGGGGAAAATTAA  992

seq1  AAGTACTTCAGTACTCTGCTAAGGACAAAGAAAAGTTAGTCTTTAAGTTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTCAGTACTCTGCTAAGGACAAAGAAAAGTTAGTCTTTAAGTTA  1042

seq1  GTAGTCATCTAGCAATGTGGAGCAAATAAGAAAACCAGTACAAGTGGAAG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCATCTAGCAATGTGGAGCAAATAAGAAAACCAGTACAAGTGGAAG  1092

seq1  CATGAAGATGTCTTAACAGAAACTTTCATAAAATCATGTAGGAGAATGGG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGATGTCTTAACAGAAACTTTCATAAAATCATGTAGGAGAATGGG  1142

seq1  TCAAGTGTGGAGAATCTCTAAGAAAATCCCCCATGAAAAATGGTAAAGAA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGTGGAGAATCTCTAAGAAAATCCCCCATGAAAAATGGTAAAGAA  1192

seq1  TTC  1194
      |||
seq2  TTC  1195


seq1: chr7_99206302_99207462
seq2: B6Ng01-210H02.g_65_1210

seq1  GAATTCCAGGAAAGCTAATGTTAAGGAGCACGAAGGAAAATGAATGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAAAGCTAATGTTAAGGAGCACGAAGGAAAATGAATGCTCA  50

seq1  TATACCAATTAAGGGCACAGGAATACTCTCTAAGTATACAAAAGGGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAATTAAGGGCACAGGAATACTCTCTAAGTATACAAAAGGGACTA  100

seq1  CAACTACAATGCAAATAAATACAAATAGAATTACAATTATAATTACAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACAATGCAAATAAATACAAATAGAATTACAATTATAATTACAATC  150

seq1  ACAGATGGGAAAATAACACTAGAAAAGGCCAACAGAGGGAGAGTCAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGGAAAATAACACTAGAAAAGGCCAACAGAGGGAGAGTCAGGGC  200

seq1  TTTGAGGAAAAAATAGTAATTTAACTAAAGTCAAGAACTTTCAATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAAAAAATAGTAATTTAACTAAAGTCAAGAACTTTCAATAAAAT  250

seq1  CACCATTTAGACTATTTCTATGTATCAGAACAGTGAGGCTCTGAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTTAGACTATTTCTATGTATCAGAACAGTGAGGCTCTGAATATTT  300

seq1  GTTAGAGGAAAGTGCTGTGTTCATGCCAGTGTCCAAAGCTGATGCTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGGAAAGTGCTGTGTTCATGCCAGTGTCCAAAGCTGATGCTAAAA  350

seq1  TGCCACCATATAAAGACAGAAAGCTGATCCAAGATTTTAAGAATGGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCATATAAAGACAGAAAGCTGATCCAAGATTTTAAGAATGGCATA  400

seq1  CCCAAGAGAGCCTTGAGGCAGCTTTAGTTCTAAAGGTAGATATTTGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAGAGCCTTGAGGCAGCTTTAGTTCTAAAGGTAGATATTTGGGCA  450

seq1  AAAGTAGGTCAATGAGAGAAATGAAGTTTCCCTATTGGAAAAATCTGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGGTCAATGAGAGAAATGAAGTTTCCCTATTGGAAAAATCTGAAT  500

seq1  GTGAACCACTAACCTGGAGCTACTTTGCTTAATGAGGAAAGGGGAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCACTAACCTGGAGCTACTTTGCTTAATGAGGAAAGGGGAAGCAC  550

seq1  TAGAAAATTCATGAGTTAACTACTCACTATATACAGATTTCTGGAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTCATGAGTTAACTACTCACTATATACAGATTTCTGGAGAATT  600

seq1  ATTAAGTAATTAGAACTGGCAGCAAGAAAAGGCTGCAAGAACATTTTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTAATTAGAACTGGCAGCAAGAAAAGGCTGCAAGAACATTTTCAC  650

seq1  AAGACAATAAGTAAATATCCCCAGAAAAGACAGTTGAATGATGCTTCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATAAGTAAATATCCCCAGAAAAGACAGTTGAATGATGCTTCAAC  700

seq1  CACAAGTTTCAAGGATCCCACAAAGGTTAGAGGTTAGTGAAATATTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTTTCAAGGATCCCACAAAGGTTAGAGGTTAGTGAAATATTTGTA  750

seq1  TATCTCTATATTTTATCACTGAAGGTGAATTACATCCATTCATTGTAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTATATTTTATCACTGAAGGTGAATTACATCCATTCATTGTAGCT  800

seq1  AACAGTGAATGTATTTATGTTAGTGTGCTGTAATTTTTTTCTGTAATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAATGTATTTATGTTAGTGTGCTGTAATTTTTTTCTGTAATAAT  850

seq1  TCTTCAGACACCGTAAGTACGTAGGAACTTCTGAAATTCTATTAGCAAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGACACCGTAAGTACGTAGGAACTTCTGAAATTCTATTAGCAAGG  900

seq1  TTTATGGGAAGTCTTGCCATTTGAATAGCCACTGCCCAAGCACCTGATGA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTATGGGAAGTCTTGCCATTTGAATAGCCACTG-CCAAGCACCTGATGA  949

seq1  CAGTTACCAAATAGCACTAA-TATTTCAATTTAGTAGCTACCAAAAAAAA  999
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  CAGTTACC-AATAGCACTAATTATTTCAATTTAGTAGCTACCAAAAAAAA  998

seq1  GGTAAAATTAATTGCCTTTTACTCCAGAACAGCTTTCTAAATTGACAGGT  1049
      ||||||  | ||||||||||||||  ||||||||||||||  ||||||  
seq2  GGTAAA--TTATTGCCTTTTACTCAGGAACAGCTTTCTAA--TGACAG--  1042

seq1  CCTGGAGTTGGATCAAGCCCAGTGACACCTGACCCTCCCCCTTTCATTGG  1099
       || |||||||||| || ||||||||| |||||| |||||||||||||||
seq2  TCTTGAGTTGGATC-AGGCCAGTGACA-CTGACCTTCCCCCTTTCATTGG  1090

seq1  TTTGGATAACCACCAAGTCAATGGACT-GGATTCCTAAAGCTGTTGTCGT  1148
      ||| || |  |||  ||||| || ||| ||||||||  ||||||||||| 
seq2  TTTTGA-ATACAC--AGTCATTGAACTGGGATTCCT--AGCTGTTGTCG-  1134

seq1  TGCTGTGACAAAC  1161
      ||||| |||||||
seq2  TGCTG-GACAAAC  1146


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