BAC Information

Click to search

BAC

Clone NameB6Ng01-210P10
Chromosome7 (Build37)4 (Build37)
Map Location 22,481,939 - 22,482,2433,204,611 - 3,204,982
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378
Downstream geneLOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210P10.bB6Ng01-210P10.g
ACCGA029163GA029164
length799366
definitionB6Ng01-210P10.b B6Ng01-210P10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,481,939 - 22,482,243)(3,204,611 - 3,204,982)
sequence
gaattctacgtaactaaggggtcatgtcctattatttggcaatgtacccg
gttcattctgaggttgttccaggaggcccttatctcaaaaatgttcttgg
aacagtctttagttgggagggttcgaactctagggtgaggagttcaggaa
tgcattctggggtgaagagttcaggagtgttctgggaacaatctctagat
gggaggggtcgggctctggggtgaggaagagttcagtaattttttatctt
tattcttcagttcctcactggcttacctcccctggcttgctcagcctgct
cccttttagaaccaagactaccagcacagagatggtcccactcacaaggg
gactttcccctttgatcactaattgaaaaaatgccttacagttgtatctc
atggaggcatttcctcaactaaagctcctttctctgtgattactccagct
gtatcaagttgacacaaaactagccagtacaaatgacccttttctttctc
tctttctttctttctttctttctttctttctttctttctttctttctttc
tttctctctctctctctctctctctctctctctctctctctctctctttc
ttttttcctgactcttatgaagtgagtagtctgcacactataggacctgg
actatggcaaggaaacactgaaaaacttggataatgagaaatgcatactg
tatgacctggaatatggctagataacttaacaaggttggaaaatgagaca
cacacccctgtaggacctggaatataggcgagaaaccctaccaaatgag
acaaagatccacctgtctctgcctcccaagtgctggaactaaaggtctga
gtccctgtacctggctcttgtgatacatgctttgcactcagccattctct
gtgctccaagaagttaagatgggttggtgggcagtgtaggggcctggctc
aggttgctattgaggagcaagtagacataggtgttaaaggcactagtggc
tgctgctttaggccctcaggaggggaggatggcagtgccatacttaggta
tacactacaaaggggacatcacagatggggtgtgaatatatgagggcaca
tggaatagcaggacccatattgtggcctagaactatggtagcatgggaga
tggagagagaggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22481939_22482243
seq2: B6Ng01-210P10.b_43_353 (reverse)

seq1  TTCTAAAAGG--------------------------------AGTGTGGA  18
      ||||||||||                                |||| |||
seq2  TTCTAAAAGGGAGCAGGCTGAGCAAGCCAGGGGAGGTAAGCCAGTGAGGA  50

seq1  A-TGAAGAATAAAGATAAAAAATTACTGAACTCTTCCTCACCCCAGAGCC  67
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGAATAAAGATAAAAAATTACTGAACTCTTCCTCACCCCAGAGCC  100

seq1  CGACCCCTCCCATCTAGAGATTGTTCCCAGAACACTCCTGAACTCTTCAC  117
      |||||||||||||||||||||||||||||||||||               
seq2  CGACCCCTCCCATCTAGAGATTGTTCCCAGAACAC---------------  135

seq1  CCCAGAATGCATTCCTGAACTCTTCACCCCAGAATGCATTCCTGAACTCC  167
                  ||||||||||||||||||||||||||||||||||||||
seq2  ------------TCCTGAACTCTTCACCCCAGAATGCATTCCTGAACTCC  173

seq1  TTACCCTAGAGTTCGAACCCTCCCAACTAAAGACTGTTCCAAGAACATTT  217
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTAGAGTTCGAACCCTCCCAACTAAAGACTGTTCCAAGAACATTT  223

seq1  TTGAGATAAGGGCCTCCTGGAACAACCTCAGAATGAACCGGGTACATTGC  267
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATAAGGGCCTCCTGGAACAACCTCAGAATGAACCGGGTACATTGC  273

seq1  CAAATAATAGGACATGACACCTTAGTTACGTAGAATTC  305
      |||||||||||||||||| |||||||||||||||||||
seq2  CAAATAATAGGACATGACCCCTTAGTTACGTAGAATTC  311

seq1: chr4_3204611_3204982
seq2: B6Ng01-210P10.g_65_436 (reverse)

seq1  CCCTCCTCTCTCTCCATCTCCCATGCTACCATAGTTCTAGGCCACAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCTCTCTCCATCTCCCATGCTACCATAGTTCTAGGCCACAATAT  50

seq1  GGGTCCTGCTATTCCATGTGCCCTCATATATTCACACCCCATCTGTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTGCTATTCCATGTGCCCTCATATATTCACACCCCATCTGTGATG  100

seq1  TCCCCTTTGTAGTGTATACCTAAGTATGGCACTGCCATCCTCCCCTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTGTAGTGTATACCTAAGTATGGCACTGCCATCCTCCCCTCCTG  150

seq1  AGGGCCTAAAGCAGCAGCCACTAGTGCCTTTAACACCTATGTCTACTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTAAAGCAGCAGCCACTAGTGCCTTTAACACCTATGTCTACTTGC  200

seq1  TCCTCAATAGCAACCTGAGCCAGGCCCCTACACTGCCCACCAACCCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAATAGCAACCTGAGCCAGGCCCCTACACTGCCCACCAACCCATCT  250

seq1  TAACTTCTTGGAGCACAGAGAATGGCTGAGTGCAAAGCATGTATCACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTTGGAGCACAGAGAATGGCTGAGTGCAAAGCATGTATCACAAG  300

seq1  AGCCAGGTACAGGGACTCAGACCTTTAGTTCCAGCACTTGGGAGGCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGTACAGGGACTCAGACCTTTAGTTCCAGCACTTGGGAGGCAGAG  350

seq1  ACAGGTGGATCTTTGTGAATTC  372
      ||||||||||||||||||||||
seq2  ACAGGTGGATCTTTGTGAATTC  372