BAC Information

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BAC

Clone NameB6Ng01-211B02
Chromosome7 (Build37)
Map Location 74,555,349 - 74,789,844
singlet/doubletdoublet
Overlap geneEG665304, Lrrc28
Upstream geneAldh1a3, Asb7, Lins2, Lass3, Adamts17, Lysmd4, Mef2a
Downstream geneTtc23, Dmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800, EG384639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211B02.bB6Ng01-211B02.g
ACCGA029243GA029244
length3751,138
definitionB6Ng01-211B02.b B6Ng01-211B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,555,349 - 74,555,723)(74,788,708 - 74,789,844)
sequence
acaaccttcctgctaatgtgtcccaggcacaatgcagcatcacctataaa
tactgtctagcaatttactgattttttcctaatagttaacacctttctgg
gtgtcaccaagcttggggctctggaaacaaggctgtgaacaagatcatca
atggttcctgaccccaaagagcaaaggatctaataaacgagacagatgac
aatctcagatacattgataaaccatgccaagggccatggaagcaaggctt
gctactgagaaatggagtagccctcaactctggtgtaaaaggcatcactg
gcaaagactctcaggaccaatcacctgtgactccggctgaaggctgttgg
gtggcagtggggtgggggtggggag
gaattcttacgacctttagactcgaactaactcgggcaaaaccaagacgt
ctggtagtttttctcctggagaaaacagccttttacagatgtttgtagta
tgcagtttgtctctgatctccagtgttagagagccggcttgtgtattccg
tcaaattaagtactgggaagtcagttatgggctactctttaaaatacctg
tacttaaaatggggatatacttgagagattattgtgtttctcctgagaag
actggtgttggactttcagaaaactgaaggagcaaatgtatctagtcaat
acccgttacattatttacagtaaccgtgggcagggggtgacgttttgaaa
gggccaggagaacttaaaaaggctgtattgccagtgagtgcatattggga
agccaagagtacgttcatctttggaagcttttggatttcatttgcataca
cgtaatttccgagtttgtacgaagatgcatttcagcagagcctaatgatg
cttttgaagtaaccggtgccaggtggaacattcagagagagccatctggc
tacagggagtgaagattttgaatatggttttttagtttgcaaaagggaaa
ctttcttgtgtgtaatctttggctgttttataagaatgacacaatggcta
cattttataattgtaaaaggctgcgttataggaaaggtggtgcccagact
ttggagttaggaccacctgcatttcggttgtagcaaagtacctcatctgt
aaagtggattaatgtctgctgtgctgcttggctgtgaagaataagatatt
tatgacagcgagtttaaattgtctgtgagtgatctcaatgggtagattaa
aaaaaatcaaccttggaacagttactctgatttcatccacttattagctg
tttgaaagctaaaagtatttttagaactgtattatgcaggcatgcagaaa
tgaaggaaactaacatttccttctggatttaggggttttacagactctca
tctaatgtcggtaaacaggtgtgcatattctatctagatctatacgacgt
ataatataaccaatagtaaaactgaacatctggctttgctctggagagag
agcagaaataatagttgggaatagggaagggtgagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74555349_74555723
seq2: B6Ng01-211B02.b_54_428

seq1  ACAACCTTCCTGCTAATGTGTCCCAGGCACAATGCAGCATCACCTATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTTCCTGCTAATGTGTCCCAGGCACAATGCAGCATCACCTATAAA  50

seq1  TACTGTCTAGCAATTTACTGATTTTTTCCTAATAGTTAACACCTTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTAGCAATTTACTGATTTTTTCCTAATAGTTAACACCTTTCTGG  100

seq1  GTGTCACCAAGCTTGGGGCTCTGGAAACAAGGCTGTGAACAAGATCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACCAAGCTTGGGGCTCTGGAAACAAGGCTGTGAACAAGATCATCA  150

seq1  ATGGTTCCTGACCCCAAAGAGCAAAGGATCTAATAAACGAGACAGATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCTGACCCCAAAGAGCAAAGGATCTAATAAACGAGACAGATGAC  200

seq1  AATCTCAGATACATTGATAAACCATGCCAAGGGCCATGGAAGCAAGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGATACATTGATAAACCATGCCAAGGGCCATGGAAGCAAGGCTT  250

seq1  GCTACTGAGAAATGGAGTAGCCCTCAACTCTGGTGTAAAAGGCATCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGAGAAATGGAGTAGCCCTCAACTCTGGTGTAAAAGGCATCACTG  300

seq1  GCAAAGACTCTCAGGACCAATCACCTGTGACTCCGGCTGAAGGCTGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGACTCTCAGGACCAATCACCTGTGACTCCGGCTGAAGGCTGTTGG  350

seq1  GTGGCAGTGGGGTGGGGGTGGGGAG  375
      |||||||||||||||||||||||||
seq2  GTGGCAGTGGGGTGGGGGTGGGGAG  375

seq1: chr7_74788708_74789844
seq2: B6Ng01-211B02.g_67_1204 (reverse)

seq1  AAACTCACC--TCCCTATCCCAAACTATTTATTTCCTTGGCTCTCTCT-C  47
      | |||||||  ||||||| || ||||| |||||||    ||||||||| |
seq2  ACACTCACCCTTCCCTATTCCCAACTA-TTATTTC---TGCTCTCTCTCC  46

seq1  AGAGC-AAGCCAGTTGTTCAGTTTTTACTATTTGTTTTATATTATATGTC  96
      ||||| ||||||| ||||||| |||||||||| |  |||||||||| |||
seq2  AGAGCAAAGCCAGATGTTCAG-TTTTACTATTGG--TTATATTATACGTC  93

seq1  -TATAGATCTAGATAG-ATATGCACACCTGTTTACGGACAATTTAGATGA  144
       ||||||||||||||| |||||||||||||||||| ||||  ||||||||
seq2  GTATAGATCTAGATAGAATATGCACACCTGTTTACCGACA--TTAGATGA  141

seq1  GAGTCTGTAAAA-CCCTAAATCCAGA--GGAATGTTAGTTT-CTTCATTT  190
      |||||||||||| |||||||||||||  | ||||||||||| ||||||||
seq2  GAGTCTGTAAAACCCCTAAATCCAGAAGGAAATGTTAGTTTCCTTCATTT  191

seq1  CTGCATGCCTGCATAATACAGTTTCTAAAATACTTTTAGCTTTCAAACAG  240
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  CTGCATGCCTGCATAATACAGTTCTAAAAATACTTTTAGCTTTCAAACAG  241

seq1  CTAATAAGTGGATGAAATCAGAGTAACTGTTCCAAGGTTGATTTTTTTTA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGTGGATGAAATCAGAGTAACTGTTCCAAGGTTGATTTTTTTTA  291

seq1  ATCTACCCATTGAGATCACTCACAGACAATTTAAACTCGCTGTCATAAAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCCATTGAGATCACTCACAGACAATTTAAACTCGCTGTCATAAAT  341

seq1  ATCTTATTCTTCACAGCCAAGCAGCACAGCAGACATTAATCCACTTTACA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTCTTCACAGCCAAGCAGCACAGCAGACATTAATCCACTTTACA  391

seq1  GATGAGGTACTTTGCTACAACCGAAATGCAGGTGGTCCTAACTCCAAAGT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGTACTTTGCTACAACCGAAATGCAGGTGGTCCTAACTCCAAAGT  441

seq1  CTGGGCACCACCTTTCCTATAACGCAGCCTTTTACAATTATAAAATGTAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCACCACCTTTCCTATAACGCAGCCTTTTACAATTATAAAATGTAG  491

seq1  CCATTGTGTCATTCTTATAAAACAGCCAAAGATTACACACAAGAAAGTTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTGTCATTCTTATAAAACAGCCAAAGATTACACACAAGAAAGTTT  541

seq1  CCCTTTTGCAAACTAAAAAACCATATTCAAAATCTTCACTCCCTGTAGCC  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGCAAACTAAAAAACCATATTCAAAATCTTCACTCCCTGTAGCC  591

seq1  AGATGGCTCTCTCTGAATGTTCCACCTGGCACCGGTTACTTCAAAAGCAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCTCTCTGAATGTTCCACCTGGCACCGGTTACTTCAAAAGCAT  641

seq1  CATTAGGCTCTGCTGAAATGCATCTTCGTACAAACTCGGAAATTACGTGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGCTCTGCTGAAATGCATCTTCGTACAAACTCGGAAATTACGTGT  691

seq1  ATGCAAATGAAATCCAAAAGCTTCCAAAGATGAACGTACTCTTGGCTTCC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATGAAATCCAAAAGCTTCCAAAGATGAACGTACTCTTGGCTTCC  741

seq1  CAATATGCACTCACTGGCAATACAGCCTTTTTAAGTTCTCCTGGCCCTTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGCACTCACTGGCAATACAGCCTTTTTAAGTTCTCCTGGCCCTTT  791

seq1  CAAAACGTCACCCCCTGCCCACGGTTACTGTAAATAATGTAACGGGTATT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACGTCACCCCCTGCCCACGGTTACTGTAAATAATGTAACGGGTATT  841

seq1  GACTAGATACATTTGCTCCTTCAGTTTTCTGAAAGTCCAACACCAGTCTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGATACATTTGCTCCTTCAGTTTTCTGAAAGTCCAACACCAGTCTT  891

seq1  CTCAGGAGAAACACAATAATCTCTCAAGTATATCCCCATTTTAAGTACAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGAAACACAATAATCTCTCAAGTATATCCCCATTTTAAGTACAG  941

seq1  GTATTTTAAAGAGTAGCCCATAACTGACTTCCCAGTACTTAATTTGACGG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAAGAGTAGCCCATAACTGACTTCCCAGTACTTAATTTGACGG  991

seq1  AATACACAAGCCGGCTCTCTAACACTGGAGATCAGAGACAAACTGCATAC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACAAGCCGGCTCTCTAACACTGGAGATCAGAGACAAACTGCATAC  1041

seq1  TACAAACATCTGTAAAAGGCTGTTTTCTCCAGGAGAAAAACTACCAGACG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACATCTGTAAAAGGCTGTTTTCTCCAGGAGAAAAACTACCAGACG  1091

seq1  TCTTGGTTTTGCCCGAGTTAGTTCGAGTCTAAAGGTCGTAAGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTTGCCCGAGTTAGTTCGAGTCTAAAGGTCGTAAGAATTC  1138