BAC Information

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BAC

Clone NameB6Ng01-211E10
Chromosome7 (Build37)
Map Location 136,030,898 - 136,032,305
singlet/doubletsinglet
Overlap genenone
Upstream geneBC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip
Downstream geneLOC210714, LOC100043144, Ppapdc1a, Brwd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211E10.bB6Ng01-211E10.g
ACCGA029389GA029390
length8551,007
definitionB6Ng01-211E10.b B6Ng01-211E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactgaatagcaatgaaaagacaacatatggagactggcagga
tatggttaaaggaggcctagaagggaagctatttctgtaatgtttatact
aaagaaagcaaggctttgcctggcatggtgtcacaaacctttaatctcag
aggcaggtggatgtctgtgaattcaaggctagtgtggtctaaaagccagt
tccaggccaacgagggctatgtagtgagtccctgccttggaaaaaaatag
aagaaataaaattatttaaaacaagtaattaaagtttctatcctaaaaag
tcatataattaactagttaaatatcaactaagagtaaagataaaaaaaac
aataatttttttaaaaacaaattaaataaatttaacaaaattaagatgtg
actcagaaaagatcttgataaatccttagcaagactagtgaatttggaaa
tagtataatttacattactaatatcaaaaatgatgatatatcttgtagat
attaaaccaataataagaaaataagtttggtaatttagacacaataaatt
tctcatattacacaaatttccaaggctgattcaagagataagaataaata
tatacataaatgtggctttaaagaagttatgtccttagtaaaaagtcttc
atagaaagaaaactcctaaaccgggcagggatagtgcacacctttaattc
cagcacttgagaggcagaggcaggtgcatctctggcttagaggccagcct
ggtctactaagtgactttcatgacagccagggctacacagatgaaacctt
gtcttgaaataaaaggagaggaggggagagaataggaggaaagggagtgg
agggg
gaattctgagaaaccgaggttagacttgaaggtgcctagcaaggtagcaa
ctctaggaaagggatgtaaacatcgtggtctttctctaggatcttgccct
gtgcatcccttccatttggctgtggctacacagtatcttttataattaac
tagtaaatgtgggtgagatatcttctcacctgagtgagctgatagagaag
gtttataagaatctacaactgatggcaaatttatatggaagtgtgggcaa
cctggggaccaatccttatgactggtgtctgagccaagggcagacttggg
ggactgagttctgaaatgtgtgtattctgctgataactccaggtagacag
tgttagaactgaactaaatttcagcatctccagttgactgatatggggac
caacccaaaatttgaccccacaagtattaaaagtgagaataaaatgcatt
gtccattggaaccttccctagagatcattcacttccccgattctgtcctt
ctgcttcttttatggacagttccagaatatacaacttaaaacctattttt
ctttgaaaaattcttgaatttatacaacatatcagatccatcaccatcac
tcctagtgcctcctacctcatctcccttccaatttcacgtcctctatttt
ttcattgttattgatatcccctgaatccaggtagtcctgcctatatatgc
atgggtgctgtaccatccactgggggcatgaacagcttactcacagccat
gtccccagaggccatgactatcccctcccttaaaactacccactttcctt
gtcttttttagaaatactagtactttttctatttttaatgtggactaaaa
ttttctgaatgacttgctaagtcacacatcctggtcttatccatgcatcc
cgagtctggtatgagatgggtccacgtttttgcatccttaatgagctccc
aggtgggtctgatgctcctggatttaagatcccttcaaactggaagcaga
ggttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136030898_136032305
seq2: B6Ng01-211E10.g_70_1076

seq1  GAATTCTGAGAAACCGAGGTTAGACTTGAAGGTGCCTAGCAAGGTAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAAACCGAGGTTAGACTTGAAGGTGCCTAGCAAGGTAGCAA  50

seq1  CTCTAGGAAAGGGATGTAAACATCGTGGTCTTTCTCTAGGATCTTGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGAAAGGGATGTAAACATCGTGGTCTTTCTCTAGGATCTTGCCCT  100

seq1  GTGCATCCCTTCCATTTGGCTGTGGCTACACAGTATCTTTTATAATTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCCCTTCCATTTGGCTGTGGCTACACAGTATCTTTTATAATTAAC  150

seq1  TAGTAAATGTGGGTGAGATATCTTCTCACCTGAGTGAGCTGATAGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATGTGGGTGAGATATCTTCTCACCTGAGTGAGCTGATAGAGAAG  200

seq1  GTTTATAAGAATCTACAACTGATGGCAAATTTATATGGAAGTGTGGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAAGAATCTACAACTGATGGCAAATTTATATGGAAGTGTGGGCAA  250

seq1  CCTGGGGACCAATCCTTATGACTGGTGTCTGAGCCAAGGGCAGACTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGACCAATCCTTATGACTGGTGTCTGAGCCAAGGGCAGACTTGGG  300

seq1  GGACTGAGTTCTGAAATGTGTGTATTCTGCTGATAACTCCAGGTAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGTTCTGAAATGTGTGTATTCTGCTGATAACTCCAGGTAGACAG  350

seq1  TGTTAGAACTGAACTAAATTTCAGCATCTCCAGTTGACTGATATGGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAACTGAACTAAATTTCAGCATCTCCAGTTGACTGATATGGGGAC  400

seq1  CAACCCAAAATTTGACCCCACAAGTATTAAAAGTGAGAATAAAATGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAAAATTTGACCCCACAAGTATTAAAAGTGAGAATAAAATGCATT  450

seq1  GTCCATTGGAACCTTCCCTAGAGATCATTCACTTCCCCGATTCTGTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTGGAACCTTCCCTAGAGATCATTCACTTCCCCGATTCTGTCCTT  500

seq1  CTGCTTCTTTTATGGACAGTTCCAGAATATACAACTTAAAACCTATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTTTATGGACAGTTCCAGAATATACAACTTAAAACCTATTTTT  550

seq1  CTTTGAAAAATTCTTGAATTTATACAACATATCAGATCCATCACCATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAAATTCTTGAATTTATACAACATATCAGATCCATCACCATCAC  600

seq1  TCCTAGTGCCTCCTACCTCATCTCCCTTCCAATTTCACGTCCTCTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTGCCTCCTACCTCATCTCCCTTCCAATTTCACGTCCTCTATTTT  650

seq1  TTCATTGTTATTGATATCCCCTGAATCCAGGTAGTCCTGCCTATATATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTTATTGATATCCCCTGAATCCAGGTAGTCCTGCCTATATATGC  700

seq1  ATGGGTGCTGTACCATCCACT-GGGGCATGAACAGCTTACTCACAGCCAT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGGGTGCTGTACCATCCACTGGGGGCATGAACAGCTTACTCACAGCCAT  750

seq1  GTCCCCAGAGGCCATGACTAT-CCCTCCCTTAAAACTACCCACTTTCCTT  798
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTCCCCAGAGGCCATGACTATCCCCTCCCTTAAAACTACCCACTTTCCTT  800

seq1  GTC-TTTTTAGAAATACTAGTACTTTTTCTA-TTTTAATGTGGACTAAAA  846
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTCTTTTTTAGAAATACTAGTACTTTTTCTATTTTTAATGTGGACTAAAA  850

seq1  TTTTCTGAATGACTTGCTAAGTCACACATCCTGGTCTTATCCCATGCATC  896
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTTCTGAATGACTTGCTAAGTCACACATCCTGGTCTTAT-CCATGCATC  899

seq1  CCGAGTCTGGTATGAGATGGGTCCACGTTTTTGCATCCTTAATGAGCTCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTCTGGTATGAGATGGGTCCACGTTTTTGCATCCTTAATGAGCTCC  949

seq1  CAGGTGGGTCTGATGCTCTTGGATTATAGATCCCTTCAAACTGG-AGC--  993
      |||||||||||||||||| ||||||  ||||||||||||||||| |||  
seq2  CAGGTGGGTCTGATGCTCCTGGATTTAAGATCCCTTCAAACTGGAAGCAG  999

seq1  AGGGTGGGGGGAGGGTTTAGGGGACTTTCAGCATAGCATTTGAAATGTAA  1043
      ||| ||||                                          
seq2  AGGTTGGG------------------------------------------  1007

seq1  ATGAAGTCAATACCTAATAAAAATTGAAAAAAAAAGGAGCCTGACAAATA  1093
                                                        
seq2  --------------------------------------------------  1007

seq1  TAGAGGAGGATGCTCTCAGTCAACCATTGGACTGAGCACGTGGTCCTCAA  1143
                                                        
seq2  --------------------------------------------------  1007

seq1  TGGAAGAGTAAGAGGAAGGACTGAAGGAGCTTAAGGGGTTTGCAACCTCA  1193
                                                        
seq2  --------------------------------------------------  1007

seq1  TTTGAAGAACAACAGTATCAACCAACCAGACCCTCAGAGCTTCCAGAGAC  1243
                                                        
seq2  --------------------------------------------------  1007

seq1  TAAACCACCAACCAATTTGTACTCATGGAGGGACCCATGGCACCAGCCAC  1293
                                                        
seq2  --------------------------------------------------  1007

seq1  ATATGTAGCAGAGGATGACCTTCTTGGACATCAATGGGAGAAGAGACCCT  1343
                                                        
seq2  --------------------------------------------------  1007

seq1  TGTTCCTGTGACGGCTAGATGACCCAGTGTAGGAGAATTTGAGGGTCGGG  1393
                                                        
seq2  --------------------------------------------------  1007

seq1  ACAGGAGAGGTTGGG  1408
                     
seq2  ---------------  1007