BAC Information

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BAC

Clone NameB6Ng01-211I20
Chromosome7 (Build37)
Map Location 29,758,884 - 29,925,178
singlet/doubletdoublet
Overlap geneEif3s12, Map4k1, Ryr1, Rasgrp4
Upstream geneZfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4
Downstream gene1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211I20.bB6Ng01-211I20.g
ACCGA029589GA029590
length941206
definitionB6Ng01-211I20.b B6Ng01-211I20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,758,884 - 29,759,823)(29,924,973 - 29,925,178)
sequence
gaattccagacaatcttcttgctccagcttcctataactggaattccagg
aggacagcactacacctggtcagggtgttttcgaggcagtgtctcactac
atagccctggttggccttgaactcatggagatacagaaggcaacatccta
taccaaaccctcacccacactctggggcaggtaacaacctcggaaaggtg
cggtgggttcccctgagctgcctgaggccccatgccccaaccaccttttc
ctctcagactgacagaaacagcaccaggcctcaccagtcaggtctccgag
catctcggccagcagccagcggtcgatgtgctggtacgtgatgcccacca
cgtggcagataactgtgagaatcaaaacaaagacagtcaagaggccgctg
gcacgtaatccaggaacggagctgtgtgagaattctgagggctcttctgt
gtcccccgcaggtgtagtaaacagcaagggcttgctccagattacacaca
gctgcttctgttattaaaaaaccacttccaagcgcagctttatcctcggg
gctgtatatggcttgaactttgggaactgtgctcgtatgaccatgcttaa
ctttcagaatataaacttatgctctaaataaaattggctattgcacaagg
cccagtctgcctcatttttaatcccccttctcccaagtccctgctacact
gccttaagccctcgggaacccaggctcccaggactcacatttttcggaca
gagtcttcaaagccagttatgccttccagaatgtccatgttctcatccag
ggctgctgtggaagaaaggatgccccagtattaacactagcaccatcact
cagcattaaccagtcagtgctgacgttgtggaggctgagaacaggaggga
tccaaagtctgagtcagcaaggtgtgaagcatccgggtaca
taaacacggaactatgggcatttacacgggtgttggggttcctggagtca
ggatttagaggggtgactcaaaggatagggagatctggggtaagaatggg
agggctggtaaaacagcatcgggatctcctgagacaaatgggaagaaaga
tggtggtggtgtcaggaacgaggtggggaggaagatttggggagtaaagg
tgacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_29758884_29759823
seq2: B6Ng01-211I20.b_49_989

seq1  GAATTCCAGACAATCTTCTTGCTCCAGCTTCCTATAACTGGAATTCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACAATCTTCTTGCTCCAGCTTCCTATAACTGGAATTCCAGG  50

seq1  AGGACAGCACTACACCTGGTCAGGGTGTTTTCGAGGCAGTGTCTCACTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCACTACACCTGGTCAGGGTGTTTTCGAGGCAGTGTCTCACTAC  100

seq1  ATAGCCCTGGTTGGCCTTGAACTCATGGAGATACAGAAGGCAACATCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTGGTTGGCCTTGAACTCATGGAGATACAGAAGGCAACATCCTA  150

seq1  TACCAAACCCTCACCCACACTCTGGGGCAGGTAACAACCTCGGAAAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAACCCTCACCCACACTCTGGGGCAGGTAACAACCTCGGAAAGGTG  200

seq1  CGGTGGGTTCCCCTGAGCTGCCTGAGGCCCCATGCCCCAACCACCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGGTTCCCCTGAGCTGCCTGAGGCCCCATGCCCCAACCACCTTTTC  250

seq1  CTCTCAGACTGACAGAAACAGCACCAGGCCTCACCAGTCAGGTCTCCGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGACTGACAGAAACAGCACCAGGCCTCACCAGTCAGGTCTCCGAG  300

seq1  CATCTCGGCCAGCAGCCAGCGGTCGATGTGCTGGTACGTGATGCCCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCGGCCAGCAGCCAGCGGTCGATGTGCTGGTACGTGATGCCCACCA  350

seq1  CGTGGCAGATAACTGTGAGAATCAAAACAAAGACAGTCAAGAGGCCGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGCAGATAACTGTGAGAATCAAAACAAAGACAGTCAAGAGGCCGCTG  400

seq1  GCACGTAATCCAGGAACGGAGCTGTGTGAGAATTCTGAGGGCTCTTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTAATCCAGGAACGGAGCTGTGTGAGAATTCTGAGGGCTCTTCTGT  450

seq1  GTCCCCCGCAGGTGTAGTAAACAGCAAGGGCTTGCTCCAGATTACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCCGCAGGTGTAGTAAACAGCAAGGGCTTGCTCCAGATTACACACA  500

seq1  GCTGCTTCTGTTATTAAAAAACCACTTCCAAGCGCAGCTTTATCCTCGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTCTGTTATTAAAAAACCACTTCCAAGCGCAGCTTTATCCTCGGG  550

seq1  GCTGTATATGGCTTGAACTTTGGGAACTGTGCTCGTATGACCATGCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATGGCTTGAACTTTGGGAACTGTGCTCGTATGACCATGCTTAA  600

seq1  CTTTCAGAATATAAACTTATGCTCTAAATAAAATTGGCTATTGCACAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAATATAAACTTATGCTCTAAATAAAATTGGCTATTGCACAAGG  650

seq1  CCCAGTCTGCCTCATTTTTAATCCCCCTTCTCCCAAGTCCCTGCTACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCTGCCTCATTTTTAATCCCCCTTCTCCCAAGTCCCTGCTACACT  700

seq1  GCCTTAAGCCCTCGGGAACCCAGGCTCCCAGGACTCACA-TTTTCGGACA  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCCTTAAGCCCTCGGGAACCCAGGCTCCCAGGACTCACATTTTTCGGACA  750

seq1  GAGTCTTCAAAGCCAGTTATGCCTTCCAGAAGGTCCATGTTCTCATCCAG  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGTCTTCAAAGCCAGTTATGCCTTCCAGAATGTCCATGTTCTCATCCAG  800

seq1  GGCTTGCTGTGGAAGAAAGGATGCCCCAGTATTAACACTAGCACCATCAC  849
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGC-TGCTGTGGAAGAAAGGATGCCCCAGTATTAACACTAGCACCATCAC  849

seq1  TCAGCATTAACCAGTCAGTGCTGACGTTGTGGAGGCTGAG-ACAGGAGGG  898
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAGCATTAACCAGTCAGTGCTGACGTTGTGGAGGCTGAGAACAGGAGGG  899

seq1  ATCAAAAGTTCTGAGTCAGC-AGGTGTGAGCAATCCGGGTACA  940
      ||| |||| ||||||||||| ||||||||   |||||||||||
seq2  ATCCAAAG-TCTGAGTCAGCAAGGTGTGAAGCATCCGGGTACA  941

seq1: chr7_29924973_29925178
seq2: B6Ng01-211I20.g_71_276 (reverse)

seq1  GCGTCACCTTTACTCCCCAAATCTTCCTCCCCACCTCGTTCCTGACACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCACCTTTACTCCCCAAATCTTCCTCCCCACCTCGTTCCTGACACCA  50

seq1  CCACCATCTTTCTTCCCATTTGTCTCAGGAGATCCCGATGCTGTTTTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATCTTTCTTCCCATTTGTCTCAGGAGATCCCGATGCTGTTTTACC  100

seq1  AGCCCTCCCATTCTTACCCCAGATCTCCCTATCCTTTGAGTCACCCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCCCATTCTTACCCCAGATCTCCCTATCCTTTGAGTCACCCCTCT  150

seq1  AAATCCTGACTCCAGGAACCCCAACACCCGTGTAAATGCCCATAGTTCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGACTCCAGGAACCCCAACACCCGTGTAAATGCCCATAGTTCCG  200

seq1  TGTTTA  206
      ||||||
seq2  TGTTTA  206