BAC Information

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BAC

Clone NameB6Ng01-211P22
Chromosome7 (Build37)
Map Location 111,772,125 - 111,773,335
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656
Downstream geneOlfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211P22.bB6Ng01-211P22.g
ACCGA029905GA029906
length1,1891,108
definitionB6Ng01-211P22.b B6Ng01-211P22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatctgagtgtgggatggaaatcatggaatcacagacttgtag
aatttatgggaaatattaccacctcaataacctaaagataataggtcccc
attagaggcatgaagaagaatggccagtagggaaagctgaattcctatgg
tgttaaatccctaaagtgtaaaaggagattaattcagcaatgtgttttct
attaatgtaacttgaaaccttatataaataggaataacatttttcttcag
ggaactgaaataatcctacagtaggtaggaacttcttaatcattcttttt
ttccaatttttattagatattttcttcatttacattaaacataaagattt
aacggactataaaatatgtgattagaaagcttctttaaatagtttttttt
ccattttttattaggtatttagctcaataaataaaaataaataaataata
ataaataataaataaataataataaataaatgataaataaatagttttta
aaagaaagaatttattcaaaaacaaagtttctaatgtgtttgcaaaatgt
gacatgcataaagtgatcactaaatacatgaattccattctcctaaaaat
tgttttctagtgagggcaagggaacataacattaaatgtaaaagaaataa
aatacagaaatgtcaacttgtataaatgtcttaatgtaaaattactcaat
gaaacacaaaatagacacatagacaagaacaatagaagaaaaaatccaaa
actaagctccacatagctacagccacttgtgtcatgaatatatattggac
aaaatacagcctcttcaataaatggttctgagaaaattaaagatctactt
gcagaggaattacacaaatccatacttcttaccttatttaaaaaattcaa
aatggattaagacttggttgaagacctaagcctctgaaatttctagaaga
aaacggacaaaacacttcaaggtataaacataggcaagaactttctccat
aatattccagctgctcagaatgagccaacattaaaactgagacctatata
acacctgcagacgtagtagaaatgggttactggtgacagtagtttactac
catgtccactctgatgaactagttggtacagaagagccagagtcagataa
ggtattagcatcaaaattttagtaatctctcaggtaaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaatcaacactgagatt
ccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagca
gatgctggcgagggtgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccggaggatcccgcaatacctctcctgggca
tatatccagaagatgtccctaccggtaagaagaacacatgctccactatg
ttcatagcagccttgtttataatagccagaagctggaaagaaaccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctataaaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaagg
aacttgcacaatatgtactcactggtaagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggatactttaccctttcttagaaatgagaac
aaaacacccatggaagtagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgccaaatgcagggatccatcccataatca
gcttccaaatgctgacaccatttgcataccctaacaagattttgctgaaa
ggacccagatatagctctctcttgtgagactatgccggggcctagcaaac
acagaagtgggattgttcacagtcagctaatggggtggatcacacggctc
ccaatggaggagctagaagaaagtacccaaggagctaaaggattctgcaa
tcctatagtggaacaccaatatgactaaccagtactcgggagcctctgcc
tttagcagcatttgtatttaaaagatggccctatccggtcttcttttgta
tagtaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111772125_111773335
seq2: B6Ng01-211P22.b_49_1237 (reverse)

seq1  TTTTACCT--GAGTATACTAAAATATTTTTGATGCTAATTACCTTTAAAT  48
      ||||||||  |||  ||||||||   |||||||||||| ||||||   ||
seq2  TTTTACCTGAGAGATTACTAAAA---TTTTGATGCTAA-TACCTT---AT  43

seq1  TCTTGACTCTTGCTTCTTCTGTTACAAACTAGTTTCAACCAGAAGTGGAC  98
         ||||||| || ||||||| ||| ||||||||   | ||| |||||||
seq2  --CTGACTCTGGC-TCTTCTG-TACCAACTAGTT--CATCAG-AGTGGAC  86

seq1  ATTTGTAGTAAAACTACTGTCACCAGTAA-CCATTTCTACCTACGTCCTT  147
      | | ||||| ||||||||||||||||||| ||||||||| |||||||  |
seq2  A-TGGTAGT-AAACTACTGTCACCAGTAACCCATTTCTA-CTACGTC--T  131

seq1  GCA-GTGTAATATAGGTCTCAGTTTTTAATTGTTGGCCTCATTTCCTGAG  196
      ||| |||| |||||||||||||||||  | |||||| ||||||  |||||
seq2  GCAGGTGTTATATAGGTCTCAGTTTT--AATGTTGG-CTCATT--CTGAG  176

seq1  CAGCTGGAATATTATGGAGAAAGTTCTTGCCTATGTTTATACCTTGAAGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGAATATTATGGAGAAAGTTCTTGCCTATGTTTATACCTTGAAGT  226

seq1  GTTTTTGTCCGTTTTCTTCTAGAAATTTCAGAGGCTTAGGTCTTTCAACC  296
      | |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  G-TTTTGTCCGTTTTCTTCTAGAAATTTCAGAGGCTTAGGTC-TTCAACC  274

seq1  AAGTCTTTAATCCATTTTGAATTTTTTAAATAAGGTAAGAAGTATGGATT  346
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTC-TTAATCCATTTTGAATTTTTTAAATAAGGTAAGAAGTATGGATT  323

seq1  TGTGTAATTCCTCTGCAAGTAGATCTTTAATTTTCTCAGAACCATTTATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATTCCTCTGCAAGTAGATCTTTAATTTTCTCAGAACCATTTATT  373

seq1  GAAGAGGCTGTATTTTGTCCAATATATATTCATGACACAAGTGGCTGTAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCTGTATTTTGTCCAATATATATTCATGACACAAGTGGCTGTAG  423

seq1  CTATGTGGAGCTTAGTTTTGGA-TTTTTCTTCTATTGTTCTTGTCTATGT  495
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTATGTGGAGCTTAGTTTTGGATTTTTTCTTCTATTGTTCTTGTCTATGT  473

seq1  GTCTATTTTGTGTTTCATTGAGTAATTTTACATTAAGACATTTATACAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTTGTGTTTCATTGAGTAATTTTACATTAAGACATTTATACAAG  523

seq1  TTGACATTTCTGTATTTTATTTCTTTTACATTTAATGTTATGTTCCCTTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTTCTGTATTTTATTTCTTTTACATTTAATGTTATGTTCCCTTG  573

seq1  CCCTCACTAGAAAACAATTTTTAGGAGAATGGAATTCATGTATTTAGTGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTAGAAAACAATTTTTAGGAGAATGGAATTCATGTATTTAGTGA  623

seq1  TCACTTTATGCATGTCACATTTTGCAAACACATTAGAAACTTTGTTTTTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTATGCATGTCACATTTTGCAAACACATTAGAAACTTTGTTTTTG  673

seq1  AATAAATTCTTTCTTTTAAAAACTATTTATTTATCATTTATTTATTATTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTCTTTCTTTTAAAAACTATTTATTTATCATTTATTTATTATTA  723

seq1  TTTATTTATTATTTATTATTATTTATTTATTTTTATTTATTGAGCTAAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTATTTATTATTATTTATTTATTTTTATTTATTGAGCTAAAT  773

seq1  ACCTAATAAAAAATGGAAAAAAAACTATTTAAAGAAGCTTTCTAATCACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATAAAAAATGGAAAAAAAACTATTTAAAGAAGCTTTCTAATCACA  823

seq1  TATTTTATAGTCCGTTAAATCTTTATGTTTAATGTAAATGAAGAAAATAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAGTCCGTTAAATCTTTATGTTTAATGTAAATGAAGAAAATAT  873

seq1  CTAATAAAAATTGGAAAAAAAGAATGATTAAGAAGTTCCTACCTACTGTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAATTGGAAAAAAAGAATGATTAAGAAGTTCCTACCTACTGTA  923

seq1  GGATTATTTCAGTTCCCTGAAGAAAAATGTTATTCCTATTTATATAAGGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTTCAGTTCCCTGAAGAAAAATGTTATTCCTATTTATATAAGGT  973

seq1  TTCAAGTTACATTAATAGAAAACACATTGCTGAATTAATCTCCTTTTACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTTACATTAATAGAAAACACATTGCTGAATTAATCTCCTTTTACA  1023

seq1  CTTTAGGGATTTAACACCATAGGAATTCAGCTTTCCCTACTGGCCATTCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGGATTTAACACCATAGGAATTCAGCTTTCCCTACTGGCCATTCT  1073

seq1  TCTTCATGCCTCTAATGGGGACCTATTATCTTTAGGTTATTGAGGTGGTA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGCCTCTAATGGGGACCTATTATCTTTAGGTTATTGAGGTGGTA  1123

seq1  ATATTTCCCATAAATTCTACAAGTCTGTGATTCCATGATTTCCATCCCAC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCCATAAATTCTACAAGTCTGTGATTCCATGATTTCCATCCCAC  1173

seq1  ACTCAGATGAGAATTC  1211
      ||||||||||||||||
seq2  ACTCAGATGAGAATTC  1189