BAC Information

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BAC

Clone NameB6Ng01-212D02
Chromosome7 (Build37)
Map Location 63,357,404 - 63,358,521
singlet/doubletsinglet
Overlap geneHerc2
Upstream geneLuzp2, LOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959
Downstream genep, LOC100040839, Gabrg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212D02.bB6Ng01-212D02.g
ACCGA030053GA030054
length1,125933
definitionB6Ng01-212D02.b B6Ng01-212D02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacagagaatagtcatctaaaggacccttcattatttataaatg
tccactactgaatgagccatatttcacaaaacccttaactaagatgggtt
tgttttgtcttgtgagagaaccttgctgttctgtccagtgggccttgatc
tctggggctcctaccttcctcagctttctgagtgctgggacaactgtgta
ggagccacagttcctggctgtgttatgcaagctgtgcttgggttttatcc
ttggtattctttgtaaaatttctgaggaaacttttatagtgataagatgt
ttaggactaggactaaggctataaatattgctcacctcacacttgtgctt
ttttggcgcagctctttgagagaaacgtttctgctgcatgattgtgttgt
gcagtgactggtgcagtggaagcacctgcctgcctgtcccgtctgctctg
ggtgatgggctcactggaaacattggcttaagtgtaagcggtaggatttt
aggcaggacatagaaaatgcactgaggttttttccctcattgattagcta
atagtgtatcctttatacttttcagttcagatgacggattagcctggcct
gatagctagcattgtgttggaatgcttccaaattggcttgcttatgtgtt
gtttctggctggtttagtagtatggcatagttgggtcattattacagcct
gtatcacacacaaagactaaagaaaaggattattttatttttcagaaaaa
gtgcattattctttggtttggatagttgaaagcagaatgagaactgagtt
atttacaagcaaactgaaagttttattgttttctttttttttttcccctt
ctggacttcctcttatggctttttctactatgttactgaccagttttttt
cccccgatttaattgaggttttgcaatgattcaggtcagtttttaaagga
ccacgttgtattgtaatggtaccctttatgtcataatttagttaaaatta
caattgcactgaatatgtgcattggagccctgcttgttgtggggacacca
cagtgtcacagtgcaagccagaactggatgatggtcaagtcaaaaacagc
attgccacacacttcagtgctcatg

gaattcagaagcttgtgtacaacaaaggacacagcagtgggggaaggggg
cagggacagcccacagagtcagaggaaatcctcagcatccctcagacaag
gattggtaactagactatacagagaactaaaaataacagaaaacaactct
agcaaaaccaaaatgaattgaagagaactcttgaaaagaagtacaaatta
ctgatttttttaagcactcagcatcattagcagtcaggggtgggggtgca
aattaaaactacaagagatcacatctcaccccggtcagaatgtccaccat
caacagaactagggacaacaaattctgaagaggttatgggaaagggggag
cctttattcgctgtgtgcaggaaggtaacctgatgcagttattatggaaa
tgagtgttgggttttctcacatggctaaaggtagaagaaataccatacac
ccgagctataccactcttgtgttgtatatcctaccatatgtgcagatacc
tacctgttcatctatcttgagtactgctctattcacagcagctaagacat
gggatcagcttagatgttcattaactcactaatggaaaatgaaaacatgg
tacataaacaatggaaattttatattcagctataacgaaaaattaaattt
tccggaaaatgaatggaaattatatttttcaagtgaggcaagtcaggttc
agaaagacaaaatgtgggacgttctcactcacatatggtcatagctttaa
atttttcaaatgtgtgtgtttgatagaggttagaaagctagaattggagc
atgacagccagggaaagaggtgctgaggaggtgaataggaaaatatatat
gccagaatgtagaaaggggctagtggtaaacagcttacgtgtggataagg
gtggaaagaatgtgggagaaagagggggtttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_63357404_63358521
seq2: B6Ng01-212D02.b_42_1166

seq1  GAATTCTACAGAGAATAGTCATCTAAAGGACCCTTCATTATTTATAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGAGAATAGTCATCTAAAGGACCCTTCATTATTTATAAATG  50

seq1  TCCACTACTGAATGAGCCATATTTCACAAAACCCTTAACTAAGATGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTACTGAATGAGCCATATTTCACAAAACCCTTAACTAAGATGGGTT  100

seq1  TGTTTTGTCTTGTGAGAGAACCTTGCTGTTCTGTCCAGTGGGCCTTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTCTTGTGAGAGAACCTTGCTGTTCTGTCCAGTGGGCCTTGATC  150

seq1  TCTGGGGCTCCTACCTTCCTCAGCTTTCTGAGTGCTGGGACAACTGTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGCTCCTACCTTCCTCAGCTTTCTGAGTGCTGGGACAACTGTGTA  200

seq1  GGAGCCACAGTTCCTGGCTGTGTTATGCAAGCTGTGCTTGGGTTTTATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCACAGTTCCTGGCTGTGTTATGCAAGCTGTGCTTGGGTTTTATCC  250

seq1  TTGGTATTCTTTGTAAAATTTCTGAGGAAACTTTTATAGTGATAAGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTCTTTGTAAAATTTCTGAGGAAACTTTTATAGTGATAAGATGT  300

seq1  TTAGGACTAGGACTAAGGCTATAAATATTGCTCACCTCACACTTGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACTAGGACTAAGGCTATAAATATTGCTCACCTCACACTTGTGCTT  350

seq1  TTTTGGCGCAGCTCTTTGAGAGAAACGTTTCTGCTGCATGATTGTGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCGCAGCTCTTTGAGAGAAACGTTTCTGCTGCATGATTGTGTTGT  400

seq1  GCAGTGACTGGTGCAGTGGAAGCACCTGCCTGCCTGTCCCGTCTGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGACTGGTGCAGTGGAAGCACCTGCCTGCCTGTCCCGTCTGCTCTG  450

seq1  GGTGATGGGCTCACTGGAAACATTGGCTTAAGTGTAAGCGGTAGGATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGGGCTCACTGGAAACATTGGCTTAAGTGTAAGCGGTAGGATTTT  500

seq1  AGGCAGGACATAGAAAATGCACTGAGGTTTTTTCCCTCATTGATTAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGACATAGAAAATGCACTGAGGTTTTTTCCCTCATTGATTAGCTA  550

seq1  ATAGTGTATCCTTTATACTTTTCAGTTCAGATGACGGATTAGCCTGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTATCCTTTATACTTTTCAGTTCAGATGACGGATTAGCCTGGCCT  600

seq1  GATAGCTAGCATTGTGTTGGAATGCTTCCAAATTGGCTTGCTTATGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTAGCATTGTGTTGGAATGCTTCCAAATTGGCTTGCTTATGTGTT  650

seq1  GTTTCTGGCTGGTTTAGTAGTATGGCATAGTTGGGTCATTATTACAGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGGCTGGTTTAGTAGTATGGCATAGTTGGGTCATTATTACAGCCT  700

seq1  GTATCACACACAAAGACTAAAGAAAAGGATTATTTTATTTTTCAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACACACAAAGACTAAAGAAAAGGATTATTTTATTTTTCAGAAAAA  750

seq1  GTGCATTATTCTTTGGTTTGGATAGTTGAAAGCAGAATGAGAACTGAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTATTCTTTGGTTTGGATAGTTGAAAGCAGAATGAGAACTGAGTT  800

seq1  ATTTACAAGCAAACTGAAAGTTTTATTGTTTTCTTTTTTTTTTTCCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAAGCAAACTGAAAGTTTTATTGTTTTCTTTTTTTTTTTCCCCTT  850

seq1  CTGGACTTCCTCTTATGGCTTTTTCTACTATGTTACTGACCAG-TTTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGGACTTCCTCTTATGGCTTTTTCTACTATGTTACTGACCAGTTTTTTT  900

seq1  CCCCCGATTT-ATTGAGGTTTTGCAAATGATTCAGGTCAGTTTT--AAAG  946
      |||||||||| ||||||||||||| |||||||||||||||||||  || |
seq2  CCCCCGATTTAATTGAGGTTTTGC-AATGATTCAGGTCAGTTTTTAAAGG  949

seq1  ACCACGTTTGTATTGT-ATTGTACCCTTTTATGTCAT-ATTTAGTT-AAA  993
      |||||| ||||||||| || |||||| |||||||||| |||||||| |||
seq2  ACCACG-TTGTATTGTAATGGTACCC-TTTATGTCATAATTTAGTTAAAA  997

seq1  TTAC-ATTGCACTG-ATATGTGCCATTGGGAAGCCCTGCTTGTTGTGGGG  1041
      |||| ||||||||| ||||||| ||||||  |||||||||||||||||||
seq2  TTACAATTGCACTGAATATGTG-CATTGG--AGCCCTGCTTGTTGTGGGG  1044

seq1  ACACCACAGTG-CACAGTGC-AGGCAG-ACTGGAGGGTGGTC-AGTCAGA  1087
      ||||||||||| |||||||| || ||| |||||| | ||||| ||||| |
seq2  ACACCACAGTGTCACAGTGCAAGCCAGAACTGGATGATGGTCAAGTCAAA  1094

seq1  GACAGCATTGCCACACACCTCAGTGCTCATG  1118
       ||||||||||||||||| ||||||||||||
seq2  AACAGCATTGCCACACACTTCAGTGCTCATG  1125


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