BAC Information

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BAC

Clone NameB6Ng01-213D06
Chromosome7 (Build37)
Map Location 110,073,525 - 110,200,256
singlet/doubletdoublet
Overlap geneOlfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583
Upstream geneLrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571
Downstream geneOlfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213D06.bB6Ng01-213D06.g
ACCGA030802GA030803
length1,1631,203
definitionB6Ng01-213D06.b B6Ng01-213D06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,199,094 - 110,200,256)(110,073,525 - 110,074,737)
sequence
gaattcataagaatcatggtatatctaagaggtttgtagatcgctacata
acgatcaaaagccatagccactaacactccagattctgtacatgtgaacc
catggagaaaaaacatctgaacaatgcaaaaatctagactgatttcattt
gcctgaaaccacaggattctcaaggtggttgacattgtagaaaaagtcaa
acccaggtcagtggcagagagcacggagaggaaatagtacataggttcat
gcaggctatgctgggtcacaatgatgaagaggatcatgctgttgccagag
agggcggtggcataaagacaacagaaagggatggagatccagccatgagc
agactctaggccaggaatgccagtcaacaagaaggttggtaatttcgatg
tgaagttgcttaggaattctgtgttgtcttgcatttgtagcatttgcctt
cacaatgctcacatcctaagaagtaacaaattgtacttatttaaaaatat
ttaatccattttctgattagaaaaactactctaggaaattaattctgttg
ttcagaaaactaaaatttattaatttaggtattgaaattagagacattta
gaatatacaaagctttatattcttaaaccaagaaactaatcacataaatt
tatacacttatatattcatcttcatatttatagacatttaagtttcacag
gattttgtgcataaatagtgatttctaaaatggcaaacaataagaatctt
ccagtgtgagagactccaatcttagaaacacagaaaacaagcacatttaa
ttcttaatttgctaggcttaaagtgagccggaaaaaccttcttaaagact
ttgtttctctggattggtcctgctggtgtgactcttcagacatagaactc
tagaagcaatcactttgatcccacattatgggtgaatagctgaagagagt
tggcatttaaagggaaaataatgaagacagaatattgtgaacgttaatag
gatagattacattttctaagctattgggatgcctgaatgctttatgagaa
ctataaaacaaacaaacaaacaaaccgagtgcatgtacccctaatgtttg
acagcagtgcctgactgcttgaagcacccactctagttaagcatgaaaca
ttccatgcaggtc
gaattccacctgcttcttcaatctaagatgtacatttgaagatgtgagac
gaggaacctaagatgcaggtatggaatgtttacgtggtctcatgtatcaa
catgagggacacagtgcagggtgtagaagaccaaggctccatcgaaccac
aaatggcagagctttgggtccaagggcacaatgttcagaagatagagttg
aattccatctgcttcctagatcttggataatttgcataaactcaagacgt
aaggattcatgtgaaaaagggtctctgtcaagagctgcagtgactttgct
ttttctaattgagtctgcaattcccttggtacttagttttaattctcaac
aatgctatgcagctcaccatctcttactgtcttagaatttttgctcctaa
aatgaatgaatgaaagaataatagcaaataatggtaattctattatccag
gcttcggggttttgttaataaattattaaatgcatcaacttttatctctc
tactgctcctggatttttgttttcttccctcttcttcttccctcccaccc
tactttacccctcttttatttgctcaccttttacattttcttttatcatc
cacctgcattataggcatttttcttattaacaatttttattctcaaaaag
tactaaggcatacatatgtgacacaataatttattagagatagaaaatgt
aaatgctaatataaaagatgaaattgtttaatgaatagtcaaccgtgttt
cataaaagggaaagaaatgagtgttgcatagaagtagtaaatatctcatc
tggaattcttggagagaaatttttagagagagttttctgtaagagttaaa
gcacaattaccagcagttagaaggtattttccaccatgtcagagaatcag
ccaggaatgggatggacaagcacaggctgatctgcttaacaatatcagat
cagaggggtgaaaatgtttttaattacaaaggatagtaattaaattatga
ttctttggtgttggaggggagaatctatcagcttcaaattccactgtttg
aaagaactccctttcacatcatcagtaataagatctccggaacaacagcc
acaaattagaatccacacaaattgaaatcacttataaaaacatatgtttt
atttctaatatggggtcaggctaatatctttcttcataggtaatccttgg
gat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110199094_110200256
seq2: B6Ng01-213D06.b_48_1210 (reverse)

seq1  GACCTGCATTGGAATGTTTCCATGCTT-ACTAGAGTTGGGTGC-TCAAGC  48
      |||||||| |||||||||| ||||||| ||||||| ||||||| ||||||
seq2  GACCTGCA-TGGAATGTTT-CATGCTTAACTAGAG-TGGGTGCTTCAAGC  47

seq1  AGTTCAGCACTGCTGTCAAACATAGGGGGTACCATGCACTCGGTTTGTTT  98
      |||   |||||||||||||||||  |||||| ||||||||||||||||||
seq2  AGTCAGGCACTGCTGTCAAACATTAGGGGTA-CATGCACTCGGTTTGTTT  96

seq1  GTTTGTTTGTTTTATAGTTCTCATAAAGCATTCAGGCATCCC-ATAGCTT  147
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTTTGTTTGTTTTATAGTTCTCATAAAGCATTCAGGCATCCCAATAGCTT  146

seq1  AGAAAATGTAATCTATCCTATTAACGTTCACAATATTCTGTCTTCATTAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTAATCTATCCTATTAACGTTCACAATATTCTGTCTTCATTAT  196

seq1  TTT-CCTTTAAATGCCAACTCTCTTCAGCTATTCACCCATAATGTGGGAT  246
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTAAATGCCAACTCTCTTCAGCTATTCACCCATAATGTGGGAT  246

seq1  CAAAGTGATTGCTTCTAGAGTTCTATGTCTGAAGAGTCACACCAGCAGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGATTGCTTCTAGAGTTCTATGTCTGAAGAGTCACACCAGCAGGA  296

seq1  CCAATCCAGAGAAACAAAGTCTTTAAGAAGGTTTTTCCGGCTCACTTTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCAGAGAAACAAAGTCTTTAAGAAGGTTTTTCCGGCTCACTTTAA  346

seq1  GCCTAGCAAATTAAGAATTAAATGTGCTTGTTTTCTGTGTTTCTAAGATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGCAAATTAAGAATTAAATGTGCTTGTTTTCTGTGTTTCTAAGATT  396

seq1  GGAGTCTCTCACACTGGAAGATTCTTATTGTTTGCCATTTTAGAAATCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTCTCACACTGGAAGATTCTTATTGTTTGCCATTTTAGAAATCAC  446

seq1  TATTTATGCACAAAATCCTGTGAAACTTAAATGTCTATAAATATGAAGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGCACAAAATCCTGTGAAACTTAAATGTCTATAAATATGAAGAT  496

seq1  GAATATATAAGTGTATAAATTTATGTGATTAGTTTCTTGGTTTAAGAATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATAAGTGTATAAATTTATGTGATTAGTTTCTTGGTTTAAGAATA  546

seq1  TAAAGCTTTGTATATTCTAAATGTCTCTAATTTCAATACCTAAATTAATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTTGTATATTCTAAATGTCTCTAATTTCAATACCTAAATTAATA  596

seq1  AATTTTAGTTTTCTGAACAACAGAATTAATTTCCTAGAGTAGTTTTTCTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAGTTTTCTGAACAACAGAATTAATTTCCTAGAGTAGTTTTTCTA  646

seq1  ATCAGAAAATGGATTAAATATTTTTAAATAAGTACAATTTGTTACTTCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAATGGATTAAATATTTTTAAATAAGTACAATTTGTTACTTCTT  696

seq1  AGGATGTGAGCATTGTGAAGGCAAATGCTACAAATGCAAGACAACACAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGAGCATTGTGAAGGCAAATGCTACAAATGCAAGACAACACAGA  746

seq1  ATTCCTAAGCAACTTCACATCGAAATTACCAACCTTCTTGTTGACTGGCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAAGCAACTTCACATCGAAATTACCAACCTTCTTGTTGACTGGCA  796

seq1  TTCCTGGCCTAGAGTCTGCTCATGGCTGGATCTCCATCCCTTTCTGTTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCCTAGAGTCTGCTCATGGCTGGATCTCCATCCCTTTCTGTTGT  846

seq1  CTTTATGCCACCGCCCTCTCTGGCAACAGCATGATCCTCTTCATCATTGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGCCACCGCCCTCTCTGGCAACAGCATGATCCTCTTCATCATTGT  896

seq1  GACCCAGCATAGCCTGCATGAACCTATGTACTATTTCCTCTCCGTGCTCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCATAGCCTGCATGAACCTATGTACTATTTCCTCTCCGTGCTCT  946

seq1  CTGCCACTGACCTGGGTTTGACTTTTTCTACAATGTCAACCACCTTGAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACTGACCTGGGTTTGACTTTTTCTACAATGTCAACCACCTTGAGA  996

seq1  ATCCTGTGGTTTCAGGCAAATGAAATCAGTCTAGATTTTTGCATTGTTCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTGGTTTCAGGCAAATGAAATCAGTCTAGATTTTTGCATTGTTCA  1046

seq1  GATGTTTTTTCTCCATGGGTTCACATGTACAGAATCTGGAGTGTTAGTGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTTCTCCATGGGTTCACATGTACAGAATCTGGAGTGTTAGTGG  1096

seq1  CTATGGCTTTTGATCGTTATGTAGCGATCTACAAACCTCTTAGATATACC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCTTTTGATCGTTATGTAGCGATCTACAAACCTCTTAGATATACC  1146

seq1  ATGATTCTTATGAATTC  1163
      |||||||||||||||||
seq2  ATGATTCTTATGAATTC  1163

seq1: chr7_110073525_110074737
seq2: B6Ng01-213D06.g_69_1271

seq1  GAATTCCACCTGCTTCTTCAATCTAAGATGTACATTTGAAGATGTGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTGCTTCTTCAATCTAAGATGTACATTTGAAGATGTGAGAC  50

seq1  GAGGAACCTAAGATGCAGGTATGGAATGTTTACGTGGTCTCATGTATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACCTAAGATGCAGGTATGGAATGTTTACGTGGTCTCATGTATCAA  100

seq1  CATGAGGGACACAGTGCAGGGTGTAGAAGACCAAGGCTCCATCGAACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGGACACAGTGCAGGGTGTAGAAGACCAAGGCTCCATCGAACCAC  150

seq1  AAATGGCAGAGCTTTGGGTCCAAGGGCACAATGTTCAGAAGATAGAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCAGAGCTTTGGGTCCAAGGGCACAATGTTCAGAAGATAGAGTTG  200

seq1  AATTCCATCTGCTTCCTAGATCTTGGATAATTTGCATAAACTCAAGACGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATCTGCTTCCTAGATCTTGGATAATTTGCATAAACTCAAGACGT  250

seq1  AAGGATTCATGTGAAAAAGGGTCTCTGTCAAGAGCTGCAGTGACTTTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCATGTGAAAAAGGGTCTCTGTCAAGAGCTGCAGTGACTTTGCT  300

seq1  TTTTCTAATTGAGTCTGCAATTCCCTTGGTACTTAGTTTTAATTCTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATTGAGTCTGCAATTCCCTTGGTACTTAGTTTTAATTCTCAAC  350

seq1  AATGCTATGCAGCTCACCATCTCTTACTGTCTTAGAATTTTTGCTCCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATGCAGCTCACCATCTCTTACTGTCTTAGAATTTTTGCTCCTAA  400

seq1  AATGAATGAATGAAAGAATAATAGCAAATAATGGTAATTCTATTATCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGAATGAAAGAATAATAGCAAATAATGGTAATTCTATTATCCAG  450

seq1  GCTTCGGGGTTTTGTTAATAAATTATTAAATGCATCAACTTTTATCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGGGGTTTTGTTAATAAATTATTAAATGCATCAACTTTTATCTCTC  500

seq1  TACTGCTCCTGGATTTTTGTTTTCTTCCCTCTTCTTCTTCCCTCCCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTCCTGGATTTTTGTTTTCTTCCCTCTTCTTCTTCCCTCCCACCC  550

seq1  TACTTTACCCCTCTTTTATTTGCTCACCTTTTACATTTTCTTTTATCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTACCCCTCTTTTATTTGCTCACCTTTTACATTTTCTTTTATCATC  600

seq1  CACCTGCATTATAGGCATTTTTCTTATTAACAATTTTTATTCTCAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCATTATAGGCATTTTTCTTATTAACAATTTTTATTCTCAAAAAG  650

seq1  TACTAAGGCATACATATGTGACACAATAATTTATTAGAGATAGAAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGCATACATATGTGACACAATAATTTATTAGAGATAGAAAATGT  700

seq1  AAATGCTAATATAAAAGATGAAATTGTTTAATGAATAGTCAACCGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAATATAAAAGATGAAATTGTTTAATGAATAGTCAACCGTGTTT  750

seq1  CATAAAAGGGAAAGAAATGAGTGTTGCATAGAAGTAGTAAATATCTCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGGGAAAGAAATGAGTGTTGCATAGAAGTAGTAAATATCTCATC  800

seq1  TGGAATTCTTGGAGAGAAATTTTTAGAGAGAGTTTTCTGTAAGAGTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTTGGAGAGAAATTTTTAGAGAGAGTTTTCTGTAAGAGTTAAA  850

seq1  GCACAATTACCAGCAGTTAGAAGGTATTTTCCACCATGTCAGAGAATCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATTACCAGCAGTTAGAAGGTATTTTCCACCATGTCAGAGAATCAG  900

seq1  CCAGGAAT-GGATGGACAAGCACAGGCTGATCTGCTTAACAATATCAGAT  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATGGGATGGACAAGCACAGGCTGATCTGCTTAACAATATCAGAT  950

seq1  CAGA-GGGTGAAAATGTTTTTAATTACAAAGGATAGTAATTAAA-TATGA  997
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGAGGGGTGAAAATGTTTTTAATTACAAAGGATAGTAATTAAATTATGA  1000

seq1  TTCTTT-GTGTTG--AGGGAGAATCTATCAGCTTCAAATTCCACTGTTTG  1044
      |||||| ||||||   ||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGTGTTGGAGGGGAGAATCTATCAGCTTCAAATTCCACTGTTTG  1050

seq1  AAAAGAACTCCCCTTCACATCCATCAGTAAATAAGATCTCCAGAAACAAC  1094
       ||||||||||| ||||||| ||||||| |||||||||||| | ||||||
seq2  -AAAGAACTCCCTTTCACAT-CATCAGT-AATAAGATCTCC-GGAACAAC  1096

seq1  AGCCACAAAATTAAGAATCACACA-AAATAGAATATCACTATTAAAAACA  1143
      |||||||||  | |||||| |||| |||| ||| ||||||  ||||||||
seq2  AGCCACAAA--TTAGAATC-CACACAAATTGAA-ATCACTTATAAAAACA  1142

seq1  TATG-TTTATTCTAAATAATTGTGGTCCCAGCTCATATTATCTTTTTTCT  1192
      |||| ||||||   ||||  || ||| |  ||| |||      | |||||
seq2  TATGTTTTATTTCTAATA--TGGGGT-CAGGCTAATA------TCTTTCT  1183

seq1  TCATA-GTGATCCTTTTGGGAT  1213
      ||||| || ||||  |||||||
seq2  TCATAGGTAATCC--TTGGGAT  1203