BAC Information

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BAC

Clone NameB6Ng01-213I04
Chromosome7 (Build37)
Map Location 142,833,619 - 142,962,984
singlet/doubletdoublet
Overlap genePtpre, Mki67
Upstream geneLOC668750, Dock1, B830028B13Rik, EG668693, LOC100043254, Foxi2, Clrn3
Downstream geneLOC668764, LOC546009, EG621677
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213I04.bB6Ng01-213I04.g
ACCGA031015GA031016
length6111,137
definitionB6Ng01-213I04.b B6Ng01-213I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,962,446 - 142,962,984)(142,833,619 - 142,834,743)
sequence
gaattccaggtgtcgttctcagaacctgataccacactgctagtaaacta
gagcatgaaaccctcgttctccaatgtatatctgaaatatctcgagaggg
gcttaaggatgtagctcagttgatagagagtgtgcatctagtgtgtacag
ggcccagggtttgattagcaatactgtattaaacctggcacagcggtcca
tgactgtgatccgcttgggaggtggtagcagaaggatcagaaattcagga
catcctaggctacttcgcaagaccagggccatcctgagctatataagact
gttcacagaggaaaaaaataaaggaaaaagaagaaagagaagagactagt
gaggtaattgtaatgacctcttttctatggctatattaaaatacctgaca
aaaacataaggatttattttagtttttcattccagagagatggaatccat
tgtgacaggaaagacatggcatgtggcatagcagcaagggcagaaagttg
attgataacattttcctgcacacacaggaagaaaagagggagaagtagag
aaaaggttggggggggagggacacggaagagaaagggagggaagaaaagg
agcaagggagg

gaattcaagtggaataataaagagacaccagatggctgggcaggtttgat
gtctgcacactgtatctccctctactggtcccatcaggaagttcggctct
aagaacttgcagacagacagccacacttaatgaggggaagcagttgagct
tcgtcctccccaagggtgctggcctagcctcctcctagatcattgaatgc
ttggtggggaaggctattaatgcttgggatgaaacaatgtttcacccagg
aattccgcatctctggagttggattaagccaattaataactcccaatcaa
ttaccctgcagtttcctctagtgtatgtaaagtaccatggcagtgctcag
taacagattggagagggaaaaggcagtgtgtggcattgtgtgtgaagctg
cctgtcaaatgagagcctgggcagcacggatcctgctgagggtgtgcgtc
gccagcagccctgacctccaacatgggctttctaatcctgcagtctgact
taatctggtctctcatgctccaagaaccagtggtgtcatgccttgagggg
ttcctatgtacacaacacccatgcgagtggcaggctagagcagatgcaca
ctcaaccacggagctattcgtgtctggtccactttataaatctacaacat
gaatttgggaactaggaagaggagaggtcacacataccatgccagtggcc
gctgactaatttctgtgaggtcatttttataatgtgctttgggtcccatt
cgtcttggcagttctacctactgagaaacactgggattgcctggctcctt
ccacgtctttcagtaaattacaaacatttagtgctccctgttggaacagc
ttgagtgcttgagcatctatctacttggcctcagttctgaagtctgggtc
catttgcatccttcttggaggctttggtagcaaaactttttctcagtaga
gatgggacagagccccttgggcctggctgtgattgagtttccttgacaag
ggaccccattatctgcatgggcagttgccattgcttgccctccatttgat
taagagtccttaagcaaggtttttctacaccacaagggtagtcacatcac
tgtctactctcatgattgattgaaggtaactgggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_142962446_142962984
seq2: B6Ng01-213I04.b_43_581 (reverse)

seq1  CCTCTTTTCTTCCTGTGTGTGCAGGAAAATGTTATCAATCAACTTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTCTTCCTGTGTGTGCAGGAAAATGTTATCAATCAACTTTCTGC  50

seq1  CCTTGCTGCTATGCCACATGCCATGTCTTTCCTGTCACAATGGATTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTGCTATGCCACATGCCATGTCTTTCCTGTCACAATGGATTCCAT  100

seq1  CTCTCTGGAATGAAAAACTAAAATAAATCCTTATGTTTTTGTCAGGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGAATGAAAAACTAAAATAAATCCTTATGTTTTTGTCAGGTATT  150

seq1  TTAATATAGCCATAGAAAAGAGGTCATTACAATTACCTCACTAGTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAGCCATAGAAAAGAGGTCATTACAATTACCTCACTAGTCTCTT  200

seq1  CTCTTTCTTCTTTTTCCTTTATTTTTTTCCTCTGTGAACAGTCTTATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTCTTTTTCCTTTATTTTTTTCCTCTGTGAACAGTCTTATATA  250

seq1  GCTCAGGATGGCCCTGGTCTTGCGAAGTAGCCTAGGATGTCCTGAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGATGGCCCTGGTCTTGCGAAGTAGCCTAGGATGTCCTGAATTTC  300

seq1  TGATCCTTCTGCTACCACCTCCCAAGCGGATCACAGTCATGGACCGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTCTGCTACCACCTCCCAAGCGGATCACAGTCATGGACCGCTGT  350

seq1  GCCAGGTTTAATACAGTATTGCTAATCAAACCCTGGGCCCTGTACACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTTTAATACAGTATTGCTAATCAAACCCTGGGCCCTGTACACACT  400

seq1  AGATGCACACTCTCTATCAACTGAGCTACATCCTTAAGCCCCTCTCGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCACACTCTCTATCAACTGAGCTACATCCTTAAGCCCCTCTCGAGA  450

seq1  TATTTCAGATATACATTGGAGAACGAGGGTTTCATGCTCTAGTTTACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGATATACATTGGAGAACGAGGGTTTCATGCTCTAGTTTACTAG  500

seq1  CAGTGTGGTATCAGGTTCTGAGAACGACACCTGGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGTATCAGGTTCTGAGAACGACACCTGGAATTC  539


seq1: chr7_142833619_142834743
seq2: B6Ng01-213I04.g_67_1203

seq1  GAATTCAAGTGGAATAATAAAGAGACACCAGATGGCTGGGCAGGTTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTGGAATAATAAAGAGACACCAGATGGCTGGGCAGGTTTGAT  50

seq1  GTCTGCACACTGTATCTCCCTCTACTGGTCCCATCAGGAAGTTCGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCACACTGTATCTCCCTCTACTGGTCCCATCAGGAAGTTCGGCTCT  100

seq1  AAGAACTTGCAGACAGACAGCCACACTTAATGAGGGGAAGCAGTTGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTGCAGACAGACAGCCACACTTAATGAGGGGAAGCAGTTGAGCT  150

seq1  TCGTCCTCCCCAAGGGTGCTGGCCTAGCCTCCTCCTAGATCATTGAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCTCCCCAAGGGTGCTGGCCTAGCCTCCTCCTAGATCATTGAATGC  200

seq1  TTGGTGGGGAAGGCTATTAATGCTTGGGATGAAACAATGTTTCACCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGGGAAGGCTATTAATGCTTGGGATGAAACAATGTTTCACCCAGG  250

seq1  AATTCCGCATCTCTGGAGTTGGATTAAGCCAATTAATAACTCCCAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCGCATCTCTGGAGTTGGATTAAGCCAATTAATAACTCCCAATCAA  300

seq1  TTACCCTGCAGTTTCCTCTAGTGTATGTAAAGTACCATGGCAGTGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTGCAGTTTCCTCTAGTGTATGTAAAGTACCATGGCAGTGCTCAG  350

seq1  TAACAGATTGGAGAGGGAAAAGGCAGTGTGTGGCATTGTGTGTGAAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATTGGAGAGGGAAAAGGCAGTGTGTGGCATTGTGTGTGAAGCTG  400

seq1  CCTGTCAAATGAGAGCCTGGGCAGCACGGATCCTGCTGAGGGTGTGCGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAAATGAGAGCCTGGGCAGCACGGATCCTGCTGAGGGTGTGCGTC  450

seq1  GCCAGCAGCCCTGACCTCCAACATGGGCTTTCTAATCCTGCAGTCTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAGCCCTGACCTCCAACATGGGCTTTCTAATCCTGCAGTCTGACT  500

seq1  TAATCTGGTCTCTCATGCTCCAAGAACCAGTGGTGTCATGCCTTGAGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGGTCTCTCATGCTCCAAGAACCAGTGGTGTCATGCCTTGAGGGG  550

seq1  TTCCTATGTACACAACACCCATGCGAGTGGCAGGCTAGAGCAGATGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGTACACAACACCCATGCGAGTGGCAGGCTAGAGCAGATGCACA  600

seq1  CTCAACCACGGAGCTATTCGTGTCTGGTCCACTTTATAAATCTACAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCACGGAGCTATTCGTGTCTGGTCCACTTTATAAATCTACAACAT  650

seq1  GAATTTGGGAACTAGGAAGAGGAGAGGTCACACATACCATGCCAGTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGGGAACTAGGAAGAGGAGAGGTCACACATACCATGCCAGTGGCC  700

seq1  GCTGACTAATTTCTGTGAGGTCATTTTTATAATGTGCTTTGGGTCCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTAATTTCTGTGAGGTCATTTTTATAATGTGCTTTGGGTCCCATT  750

seq1  CGTCTTGGCAGTTCTACCTACTGAGAAACACTGGGATTGCCTGGCTCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTGGCAGTTCTACCTACTGAGAAACACTGGGATTGCCTGGCTCCTT  800

seq1  CCACGTC-TTCAGT-AATTACAAACA-TTAGTGCTCCCTGTTGGAACAGC  847
      ||||||| |||||| ||||||||||| |||||||||||||||||||||||
seq2  CCACGTCTTTCAGTAAATTACAAACATTTAGTGCTCCCTGTTGGAACAGC  850

seq1  TTGAGTGC-TGAGCATCTATCTAC-TGGCCTCAGTTCTGAGGTCTGGGTC  895
      |||||||| ||||||||||||||| ||||||||||||||| |||||||||
seq2  TTGAGTGCTTGAGCATCTATCTACTTGGCCTCAGTTCTGAAGTCTGGGTC  900

seq1  CATTTGCATCCTTCTTGGAGGCTTTGGGTAGCAAAAC-TTTTCTCAGTAG  944
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  CATTTGCATCCTTCTTGGAGGCTTT-GGTAGCAAAACTTTTTCTCAGTAG  949

seq1  AGATGGGACAGAGCCCCT--GGGCTGGCTGTGGATGAGGTTTCCTTGAC-  991
      ||||||||||||||||||  || |||||||||  ||| ||||||||||| 
seq2  AGATGGGACAGAGCCCCTTGGGCCTGGCTGTGATTGA-GTTTCCTTGACA  998

seq1  AGGGACCCCA-TATCTGCATGGGCAGGTGCCATTGCTTG-CCTCCA-TTG  1038
      |||||||||| ||||||||||||||| |||||||||||| |||||| |||
seq2  AGGGACCCCATTATCTGCATGGGCAGTTGCCATTGCTTGCCCTCCATTTG  1048

seq1  GTTAGGAGTCCTTAAGCAAGG-TTTTCTACACCAC-AGGGTAGTCACCAT  1086
       ||| |||||||||||||||| ||||||||||||| |||||||||| |||
seq2  ATTAAGAGTCCTTAAGCAAGGTTTTTCTACACCACAAGGGTAGTCA-CAT  1097

seq1  CACTGTCATCTCTAAGGA-TGATTGAAGGTGACTGGGCAA  1125
      |||||||  |||| | || ||||||||||| |||||||||
seq2  CACTGTCTACTCTCATGATTGATTGAAGGTAACTGGGCAA  1137


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